miRNEST 2.0, an integrative microRNA resource :: BLAST
>54651_sof-miR437:pmrd
Length = 149
Score = 63.9 bits (32), Expect = 3e-11
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 102 taatacattttttctcgaaacttgatctaagttagagaagtttgactt 149
||||| ||||||||| |||||||||| ||||||||||||||||||||
Sbjct: 101 taatatattttttctaaaaacttgatcaaagttagagaagtttgactt 148
>54500_sbi-miR437b:pmrd
Length = 171
Score = 63.9 bits (32), Expect = 3e-11
Identities = 76/88 (86%), Gaps = 2/88 (2%)
Strand = Plus / Minus
Query: 1 aagtcaaacttc-ctaactttgactaagttcatataaatctgcactaatatctgcaacat 59
|||||||||||| ||||||||||| ||||| ||| ||| ||||| || ||||| |||||
Sbjct: 171 aagtcaaacttctctaactttgaccaagtttatagaaaaatgcaccaacatctgaaacat 112
Query: 60 caaattaatttcactaaatctaccatga 87
|||||| |||||| || |||||||||||
Sbjct: 111 caaatt-atttcattacatctaccatga 85
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 110 tttttctcgaaacttgatctaagttagagaagtttgactt 149
||||||| ||||||| || ||||||||||||||||||||
Sbjct: 132 tttttctataaacttggtcaaagttagagaagtttgactt 171
>55112_zma-miR437f:pmrd
Length = 342
Score = 60.0 bits (30), Expect = 5e-10
Identities = 51/58 (87%)
Strand = Plus / Minus
Query: 92 ttgtatatattaatacattttttctcgaaacttgatctaagttagagaagtttgactt 149
||||||||||| | |||||||||| ||||||| || ||||||||||||||||||||
Sbjct: 59 ttgtatatatttgtgcattttttctataaacttggtcaaagttagagaagtttgactt 2
Score = 48.1 bits (24), Expect = 2e-06
Identities = 68/80 (85%), Gaps = 2/80 (2%)
Strand = Plus / Plus
Query: 1 aagtcaaacttc-ctaactttgactaagttcatataaatc-tgcactaatatctgcaaca 58
|||||||||||| ||||||||||| ||||| ||| ||| ||||| ||||| | |||||
Sbjct: 2 aagtcaaacttctctaactttgaccaagtttatagaaaaaatgcacaaatatatacaaca 61
Query: 59 tcaaattaatttcactaaat 78
|||||| | |||||||||||
Sbjct: 62 tcaaatcagtttcactaaat 81
>55107_zma-miR437a:pmrd
Length = 342
Score = 60.0 bits (30), Expect = 5e-10
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 92 ttgtatatattaatacattttttctcgaaacttgatctaagttagagaagtttgactt 149
||||||||||| | |||||||||| ||||||| || ||||||||||||||||||||
Sbjct: 284 ttgtatatatttgtgcattttttctataaacttggtcaaagttagagaagtttgactt 341
Score = 48.1 bits (24), Expect = 2e-06
Identities = 68/80 (85%), Gaps = 2/80 (2%)
Strand = Plus / Minus
Query: 1 aagtcaaacttc-ctaactttgactaagttcatataaatc-tgcactaatatctgcaaca 58
|||||||||||| ||||||||||| ||||| ||| ||| ||||| ||||| | |||||
Sbjct: 341 aagtcaaacttctctaactttgaccaagtttatagaaaaaatgcacaaatatatacaaca 282
Query: 59 tcaaattaatttcactaaat 78
|||||| | |||||||||||
Sbjct: 281 tcaaatcagtttcactaaat 262
>55110_zma-miR437d:pmrd
Length = 179
Score = 56.0 bits (28), Expect = 8e-09
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 110 tttttctcgaaacttgatctaagttagagaagtttgactt 149
||||||| ||| |||||||||||||||||||||||||||
Sbjct: 136 tttttctataaatttgatctaagttagagaagtttgactt 175
>55108_zma-miR437b:pmrd
Length = 168
Score = 48.1 bits (24), Expect = 2e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 118 gaaacttgatctaagttagagaagtttgactt 149
|||||||| || ||||||||||||||||||||
Sbjct: 136 gaaacttgttcaaagttagagaagtttgactt 167
>54516_sbi-miR437t:pmrd
Length = 170
Score = 48.1 bits (24), Expect = 2e-06
Identities = 55/64 (85%), Gaps = 1/64 (1%)
Strand = Plus / Minus
Query: 1 aagtcaaacttc-ctaactttgactaagttcatataaatctgcactaatatctgcaacat 59
|||||||||||| ||||||||||| ||||| ||| ||| ||||| || |||||| ||||
Sbjct: 170 aagtcaaacttctctaactttgaccaagtttatagaaaaatgcacaaacatctgctacat 111
Query: 60 caaa 63
||||
Sbjct: 110 caaa 107
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 110 tttttctcgaaacttgatctaagttagagaagtttgactt 149
||||||| ||||||| || ||||||||||||||||||||
Sbjct: 131 tttttctataaacttggtcaaagttagagaagtttgactt 170
>54507_sbi-miR437k:pmrd
Length = 172
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 110 tttttctcgaaacttgatctaagttagagaagtttgactt 149
||||||| ||||||| || ||||||||||||||||||||
Sbjct: 131 tttttctaaaaacttggtcaaagttagagaagtttgactt 170
>54502_sbi-miR437e:pmrd
Length = 101
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 110 tttttctcgaaacttgatctaagttagagaagtttgactt 149
||||||| ||||||| || ||||||||||||||||||||
Sbjct: 62 tttttctgaaaacttggtcaaagttagagaagtttgactt 101
>48988_osa-miR437:pmrd
Length = 213
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 110 tttttctcgaaacttgatctaagttagagaagtttgactt 149
||||||| ||||||| || ||||||||||||||||||||
Sbjct: 136 tttttctataaacttggtcaaagttagagaagtttgactt 175
>48987_osa-miR437:pmrd
Length = 213
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 110 tttttctcgaaacttgatctaagttagagaagtttgactt 149
||||||| ||||||| || ||||||||||||||||||||
Sbjct: 136 tttttctataaacttggtcaaagttagagaagtttgactt 175
>48986_osa-miR437:pmrd
Length = 213
Score = 48.1 bits (24), Expect = 2e-06
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 110 tttttctcgaaacttgatctaagttagagaagtttgactt 149
||||||| ||||||| || ||||||||||||||||||||
Sbjct: 136 tttttctataaacttggtcaaagttagagaagtttgactt 175
>54512_sbi-miR437p:pmrd
Length = 188
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 119 aaacttgatctaagttagagaagtttgactt 149
||||||| || ||||||||||||||||||||
Sbjct: 156 aaacttggtcaaagttagagaagtttgactt 186
>54504_sbi-miR437g:pmrd
Length = 176
Score = 46.1 bits (23), Expect = 7e-06
Identities = 66/79 (83%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 1 aagtcaaacttc-ctaactttgactaagttcatataaatctgcactaatatctgcaacat 59
|||||||||||| ||||||||||| ||||| ||| ||| |||| || |||| ||||||
Sbjct: 174 aagtcaaacttctctaactttgaccaagtttatagaaaattgcatcaacatctacaacat 115
Query: 60 caaattaatttcactaaat 78
|||| || |||||| ||||
Sbjct: 114 caaactagtttcaccaaat 96
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 119 aaacttgatctaagttagagaagtttgactt 149
||||||| || ||||||||||||||||||||
Sbjct: 144 aaacttggtcaaagttagagaagtttgactt 174
>54503_sbi-miR437f:pmrd
Length = 174
Score = 46.1 bits (23), Expect = 7e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 119 aaacttgatctaagttagagaagtttgactt 149
||||||| || ||||||||||||||||||||
Sbjct: 142 aaacttggtcaaagttagagaagtttgactt 172
>54511_sbi-miR437o:pmrd
Length = 175
Score = 44.1 bits (22), Expect = 3e-05
Identities = 29/30 (96%), Gaps = 1/30 (3%)
Strand = Plus / Minus
Query: 1 aagtcaaacttc-ctaactttgactaagtt 29
|||||||||||| |||||||||||||||||
Sbjct: 173 aagtcaaacttctctaactttgactaagtt 144
Score = 42.1 bits (21), Expect = 1e-04
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 101 ttaatacattttttctcgaaacttgatctaagttagagaagtttgactt 149
|||||| ||||||| | |||||| || ||||||||||||||||||||
Sbjct: 125 ttaatatattttttataaaaacttagtcaaagttagagaagtttgactt 173
>54519_sbi-miR437w:pmrd
Length = 173
Score = 42.1 bits (21), Expect = 1e-04
Identities = 36/41 (87%)
Strand = Plus / Plus
Query: 109 ttttttctcgaaacttgatctaagttagagaagtttgactt 149
|||||||| ||||||| | ||||||||||||||||||||
Sbjct: 133 ttttttctaaaaacttggtgaaagttagagaagtttgactt 173
>54506_sbi-miR437j:pmrd
Length = 172
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 119 aaacttgatctaagttagagaagtttgac 147
||||||| || ||||||||||||||||||
Sbjct: 29 aaacttggtcaaagttagagaagtttgac 1
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 130 aagttagagaagtttgactt 149
||||||||||||||||||||
Sbjct: 153 aagttagagaagtttgactt 172
>55111_zma-miR437e:pmrd
Length = 182
Score = 40.1 bits (20), Expect = 5e-04
Identities = 35/40 (87%)
Strand = Plus / Plus
Query: 110 tttttctcgaaacttgatctaagttagagaagtttgactt 149
||||||| ||||||| || |||||| |||||||||||||
Sbjct: 141 tttttctataaacttggtcgaagttaaagaagtttgactt 180
>54518_sbi-miR437v:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 130 aagttagagaagtttgactt 149
||||||||||||||||||||
Sbjct: 95 aagttagagaagtttgactt 114
>54517_sbi-miR437u:pmrd
Length = 164
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 130 aagttagagaagtttgactt 149
||||||||||||||||||||
Sbjct: 145 aagttagagaagtttgactt 164
>54515_sbi-miR437s:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 130 aagttagagaagtttgactt 149
||||||||||||||||||||
Sbjct: 155 aagttagagaagtttgactt 174
>54514_sbi-miR437r:pmrd
Length = 180
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 130 aagttagagaagtttgactt 149
||||||||||||||||||||
Sbjct: 159 aagttagagaagtttgactt 178
>54513_sbi-miR437q:pmrd
Length = 160
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 130 aagttagagaagtttgactt 149
||||||||||||||||||||
Sbjct: 139 aagttagagaagtttgactt 158
>54510_sbi-miR437n:pmrd
Length = 182
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 130 aagttagagaagtttgactt 149
||||||||||||||||||||
Sbjct: 161 aagttagagaagtttgactt 180
>54509_sbi-miR437m:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 130 aagttagagaagtttgactt 149
||||||||||||||||||||
Sbjct: 153 aagttagagaagtttgactt 172
>54508_sbi-miR437l:pmrd
Length = 170
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 130 aagttagagaagtttgactt 149
||||||||||||||||||||
Sbjct: 151 aagttagagaagtttgactt 170
>54505_sbi-miR437i:pmrd
Length = 170
Score = 40.1 bits (20), Expect = 5e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 112 tttctcgaaacttgatctaagttagagaagtttgac 147
||||| |||||||| || |||||| |||||||||||
Sbjct: 36 tttctagaaacttggtcaaagttaaagaagtttgac 1
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 130 aagttagagaagtttgactt 149
||||||||||||||||||||
Sbjct: 151 aagttagagaagtttgactt 170
>54501_sbi-miR437d:pmrd
Length = 136
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 130 aagttagagaagtttgactt 149
||||||||||||||||||||
Sbjct: 115 aagttagagaagtttgactt 134
