miRNEST 2.0, an integrative microRNA resource :: BLAST
>54378_pvu-miR159:pmrd
Length = 174
Score = 97.6 bits (49), Expect = 3e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||| |||| |||| |||||||||||||||||| ||||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacagtactacccat 77
|||||||| ||||||||
Sbjct: 64 cccacagttctacccat 80
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 146 atccttatttggattgaagggagctc 171
|||||| |||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctc 171
>54377_pvu-miR159:pmrd
Length = 174
Score = 97.6 bits (49), Expect = 3e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||| |||| |||| |||||||||||||||||| ||||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacagtactacccat 77
|||||||| ||||||||
Sbjct: 64 cccacagttctacccat 80
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 146 atccttatttggattgaagggagctc 171
|||||| |||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctc 171
>48539_gma-miR159a:pmrd
Length = 214
Score = 89.7 bits (45), Expect = 6e-19
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||| |||| |||| |||||| ||||||||||| ||||||||||
Sbjct: 23 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 82
Query: 61 cccacagtactacccat 77
|||||||| ||||||||
Sbjct: 83 cccacagttctacccat 99
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 148 ccttatttggattgaagggagctc 171
|||| |||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctc 193
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 83.8 bits (42), Expect = 4e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||| ||||| ||||| ||||| |||| ||||||||||||||||||
Sbjct: 8 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 67
Query: 61 cc 62
||
Sbjct: 68 cc 69
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 144 agatccttatttggattgaagggagctc 171
|||||| | |||||||||||||||||||
Sbjct: 140 agatccctttttggattgaagggagctc 167
>51604_ptc-miR159c:pmrd
Length = 183
Score = 83.8 bits (42), Expect = 4e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||| ||||| ||||| ||||| |||| ||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 144 agatccttatttggattgaagggagctc 171
|||||| | |||||||||||||||||||
Sbjct: 145 agatccctttttggattgaagggagctc 172
>51602_ptc-miR159a:pmrd
Length = 183
Score = 83.8 bits (42), Expect = 4e-17
Identities = 57/62 (91%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||| ||||| ||||| ||||| |||| ||||||||||||||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 144 agatccttatttggattgaagggagctc 171
|||||| | |||||||||||||||||||
Sbjct: 145 agatccctttttggattgaagggagctc 172
>54777_vvi-miR159c:pmrd
Length = 190
Score = 77.8 bits (39), Expect = 2e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||| |||||||||| ||||| |||||||||||| | |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 cccacag 67
|||||||
Sbjct: 71 cccacag 77
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 144 agatccttatttggattgaagggagctc 171
|||||||| |||||||||||||||||||
Sbjct: 151 agatccttgtttggattgaagggagctc 178
>51603_ptc-miR159b:pmrd
Length = 187
Score = 61.9 bits (31), Expect = 1e-10
Identities = 58/67 (86%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaacagagggtcttggtgggtggattgagctgctaagctatggat 60
|||||||||||||||||| ||| | || || ||||| ||| |||||||| ||||||| ||
Sbjct: 13 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 72
Query: 61 cccacag 67
|||||||
Sbjct: 73 cccacag 79
Score = 40.1 bits (20), Expect = 5e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 144 agatccttatttggattgaagggagctc 171
||||| || |||||||||||||||||||
Sbjct: 149 agatctttttttggattgaagggagctc 176
>46932_ath-miR159b:pmrd
Length = 196
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 43 agctgctaagctatggatccca 64
||||||||||||||||||||||
Sbjct: 48 agctgctaagctatggatccca 69
>46931_ath-miR159a:pmrd
Length = 184
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 43 agctgctaagctatggatccca 64
||||||||||||||||||||||
Sbjct: 47 agctgctaagctatggatccca 68
>54540_sly-miR159:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaaca 20
||||||||||||||||||||
Sbjct: 3 gagctccttgaagtccaaca 22
