miRNEST 2.0, an integrative microRNA resource :: BLAST
>42766_zma-MIR171f:mirbase
Length = 155
Score = 230 bits (116), Expect = 2e-61
Identities = 116/116 (100%)
Strand = Plus / Plus
Query: 1 gcgatgttggcatggctcaatcaactcgccggccgcgggtggcttatagcttaattctgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 22 gcgatgttggcatggctcaatcaactcgccggccgcgggtggcttatagcttaattctgc 81
Query: 61 gcattcgatcgaggtgcgggcgcagtgtttaattgattgagccgtgccaatatcac 116
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 82 gcattcgatcgaggtgcgggcgcagtgtttaattgattgagccgtgccaatatcac 137
>40062_ath-MIR171c:mirbase
Length = 116
Score = 52.0 bits (26), Expect = 9e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 87 gtttaattgattgagccgtgccaatatcac 116
||||| ||||||||||||||||||||||||
Sbjct: 80 gtttatttgattgagccgtgccaatatcac 109
>42769_zma-MIR171i:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatcac 87
Score = 46.1 bits (23), Expect = 6e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 gcgatgttggcatggctcaatcaactcgccggccg 35
|||||||||||| || |||||||| ||||||||||
Sbjct: 19 gcgatgttggcacggttcaatcaaatcgccggccg 53
>42762_zma-MIR171b:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 61 ttgattgagccgtgccaatatcac 84
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 61 ttgattgagccgtgccaatatcac 84
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 121 ttgattgagccgtgccaatatcac 144
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 gcgatgttggcatggctcaatcaa 24
||||||||||||||| ||||||||
Sbjct: 19 gcgatgttggcatggttcaatcaa 42
>41983_osa-MIR171c:mirbase
Length = 99
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 68 ttgattgagccgtgccaatatcac 91
>41982_osa-MIR171b:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 69 ttgattgagccgtgccaatatcac 92
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 63 ttgattgagccgtgccaatatcac 86
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 66 ttgattgagccgtgccaatatcac 89
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 69 ttgattgagccgtgccaatatcac 92
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 70 ttgattgagccgtgccaatatcac 93
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 71 ttgattgagccgtgccaatatcac 94
>41216_crt-MIR171:mirbase
Length = 201
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 160 ttgattgagccgtgccaatatcac 183
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 76 ttgattgagccgtgccaatatcac 99
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 76 ttgattgagccgtgccaatatcac 99
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 66 ttgattgagccgtgccaatatcac 89
>40457_gma-MIR171c:mirbase
Length = 104
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 71 ttgattgagccgtgccaatatcac 94
>40360_rco-MIR171b:mirbase
Length = 91
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 62 ttgattgagccgtgccaatatcac 85
>40359_rco-MIR171a:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 63 ttgattgagccgtgccaatatcac 86
>40318_bra-MIR171a:mirbase
Length = 85
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 61 ttgattgagccgtgccaatatcac 84
>40305_bol-MIR171a:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 67 ttgattgagccgtgccaatatcac 90
>40289_bna-MIR171e:mirbase
Length = 92
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 66 ttgattgagccgtgccaatatcac 89
>40288_bna-MIR171d:mirbase
Length = 96
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 67 ttgattgagccgtgccaatatcac 90
>39851_aly-MIR171c:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatcac 116
||||||||||||||||||||||||
Sbjct: 73 ttgattgagccgtgccaatatcac 96
>42770_zma-MIR171j:mirbase
Length = 129
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 tgattgagccgtgccaatatcac 116
|||||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatcac 112
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 tgattgagccgtgccaatatcac 116
|||||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatcac 115
>41986_osa-MIR171f:mirbase
Length = 127
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 tgattgagccgtgccaatatcac 116
|||||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatcac 119
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 gcgatgttggcatggctcaatcaa 24
||||||||||||||| ||||||||
Sbjct: 9 gcgatgttggcatggttcaatcaa 32
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 tgattgagccgtgccaatatcac 116
|||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcac 93
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 tgattgagccgtgccaatatcac 116
|||||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatcac 93
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 tgattgagccgtgccaatatcac 116
|||||||||||||||||||||||
Sbjct: 55 tgattgagccgtgccaatatcac 77
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 94 tgattgagccgtgccaatatcac 116
|||||||||||||||||||||||
Sbjct: 75 tgattgagccgtgccaatatcac 97
>42641_tae-MIR171b:mirbase
Length = 138
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 gattgagccgtgccaatatcac 116
||||||||||||||||||||||
Sbjct: 90 gattgagccgtgccaatatcac 111
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 tgattgagccgtgccaatatca 115
||||||||||||||||||||||
Sbjct: 69 tgattgagccgtgccaatatca 90
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 94 tgattgagccgtgccaatatca 115
||||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatca 89
>41538_sly-MIR171a:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatc 114
||||||||||||||||||||||
Sbjct: 86 ttgattgagccgtgccaatatc 107
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatc 114
||||||||||||||||||||||
Sbjct: 99 ttgattgagccgtgccaatatc 120
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 93 ttgattgagccgtgccaatatc 114
||||||||||||||||||||||
Sbjct: 22 ttgattgagccgtgccaatatc 1
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatc 114
||||||||||||||||||||||
Sbjct: 83 ttgattgagccgtgccaatatc 104
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatc 114
||||||||||||||||||||||
Sbjct: 79 ttgattgagccgtgccaatatc 100
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatc 114
||||||||||||||||||||||
Sbjct: 120 ttgattgagccgtgccaatatc 141
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatc 114
||||||||||||||||||||||
Sbjct: 79 ttgattgagccgtgccaatatc 100
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatc 114
||||||||||||||||||||||
Sbjct: 79 ttgattgagccgtgccaatatc 100
>40364_rco-MIR171f:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatc 114
||||||||||||||||||||||
Sbjct: 85 ttgattgagccgtgccaatatc 106
>40362_rco-MIR171d:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 93 ttgattgagccgtgccaatatc 114
||||||||||||||||||||||
Sbjct: 98 ttgattgagccgtgccaatatc 119
>40321_bra-MIR171d:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 gattgagccgtgccaatatcac 116
||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92
>40320_bra-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 gattgagccgtgccaatatcac 116
||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86
>40319_bra-MIR171b:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 gattgagccgtgccaatatcac 116
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>40287_bna-MIR171c:mirbase
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 gattgagccgtgccaatatcac 116
||||||||||||||||||||||
Sbjct: 65 gattgagccgtgccaatatcac 86
>40286_bna-MIR171b:mirbase
Length = 101
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 gattgagccgtgccaatatcac 116
||||||||||||||||||||||
Sbjct: 71 gattgagccgtgccaatatcac 92
>40285_bna-MIR171a:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 gattgagccgtgccaatatcac 116
||||||||||||||||||||||
Sbjct: 72 gattgagccgtgccaatatcac 93
>40061_ath-MIR171b:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 gattgagccgtgccaatatcac 116
||||||||||||||||||||||
Sbjct: 76 gattgagccgtgccaatatcac 97
>39850_aly-MIR171b:mirbase
Length = 137
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 gattgagccgtgccaatatcac 116
||||||||||||||||||||||
Sbjct: 87 gattgagccgtgccaatatcac 108
>39736_smo-MIR171a:mirbase
Length = 135
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 gattgagccgtgccaatatcac 116
||||||||||||||||||||||
Sbjct: 103 gattgagccgtgccaatatcac 124
>42765_zma-MIR171e:mirbase
Length = 126
Score = 42.1 bits (21), Expect = 9e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 94 tgattgagccgtgccaatatc 114
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
