miRNEST 2.0, an integrative microRNA resource :: BLAST
>41683_vvi-MIR408:mirbase
Length = 107
Score = 52.0 bits (26), Expect = 7e-08
Identities = 71/85 (83%), Gaps = 2/85 (2%)
Strand = Plus / Plus
Query: 5 gggacgaggtagagcatggatggagttcccaacagaaca--gtcaagctgttgtggctcc 62
|||||||||||| ||||||||||| | ||||||| | || |||||||| | ||||
Sbjct: 13 gggacgaggtagtgcatggatggaactattaacagaagaatgttaagctgtttttgctct 72
Query: 63 actcatgcactgcctcttccctggc 87
|| ||||||||||||||||||||||
Sbjct: 73 acccatgcactgcctcttccctggc 97
>41252_csi-MIR408:mirbase
Length = 153
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 50 ctgttgtggctccactcatgcactgcctcttccctggc 87
||||| ||||||| | ||||||||||||||||||||||
Sbjct: 103 ctgttttggctcctcccatgcactgcctcttccctggc 140
>41463_ptc-MIR408:mirbase
Length = 105
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 51 tgttgtggctccactcatgcactgcctcttccctggc 87
|||| |||||| || ||||||||||||||||||||||
Sbjct: 60 tgttttggctctacccatgcactgcctcttccctggc 96
>40405_ahy-MIR408:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ctcatgcactgcctcttccctggc 87
||||||||||||||||||||||||
Sbjct: 78 ctcatgcactgcctcttccctggc 101
>40404_ahy-MIR408:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ctcatgcactgcctcttccctggc 87
||||||||||||||||||||||||
Sbjct: 78 ctcatgcactgcctcttccctggc 101
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 64 ctcatgcactgcctcttccctggc 87
||||||||||||||||||||||||
Sbjct: 90 ctcatgcactgcctcttccctggc 113
>41193_aqc-MIR408:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 66 catgcactgcctcttccctggc 87
||||||||||||||||||||||
Sbjct: 23 catgcactgcctcttccctggc 2
>40391_rco-MIR408:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 2e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 50 ctgttgtggctccactcatgcactgcctcttccctggc 87
||||| |||||| || | ||||||||||||||||||||
Sbjct: 50 ctgttttggctctacccctgcactgcctcttccctggc 87
>40108_ath-MIR408:mirbase
Length = 218
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 catgcactgcctcttccctggc 87
||||||||||||||||||||||
Sbjct: 119 catgcactgcctcttccctggc 140
>39897_aly-MIR408:mirbase
Length = 211
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 66 catgcactgcctcttccctggc 87
||||||||||||||||||||||
Sbjct: 116 catgcactgcctcttccctggc 137
>39742_smo-MIR408:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 atgcactgcctcttccctggc 87
|||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggc 96
>39428_pta-MIR408:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 atgcactgcctcttccctggc 87
|||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggc 84
>42830_zma-MIR408b:mirbase
Length = 147
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tgcactgcctcttccctggc 87
||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggc 145
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gacagggacgaggtagagcatgg 23
||||||||||||| |||||||||
Sbjct: 1 gacagggacgaggcagagcatgg 23
>42829_zma-MIR408:mirbase
Length = 191
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tgcactgcctcttccctggc 87
||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggc 172
>42647_tae-MIR408:mirbase
Length = 187
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tgcactgcctcttccctggc 87
||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggc 156
>42600_sbi-MIR408:mirbase
Length = 205
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tgcactgcctcttccctggc 87
||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggc 204
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tgcactgcctcttccctggc 87
||||||||||||||||||||
Sbjct: 159 tgcactgcctcttccctggc 178
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gacagggacgaggtagagcatgg 23
||||||||||||| |||||||||
Sbjct: 3 gacagggacgaggcagagcatgg 25
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tgcactgcctcttccctggc 87
||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggc 246
>42465_sof-MIR408d:mirbase
Length = 215
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tgcactgcctcttccctggc 87
||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggc 196
Score = 38.2 bits (19), Expect = 0.001
Identities = 22/23 (95%)
Strand = Plus / Plus
Query: 1 gacagggacgaggtagagcatgg 23
||||||||||||| |||||||||
Sbjct: 21 gacagggacgaggcagagcatgg 43
>42464_sof-MIR408c:mirbase
Length = 286
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tgcactgcctcttccctggc 87
||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggc 267
>42463_sof-MIR408b:mirbase
Length = 286
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tgcactgcctcttccctggc 87
||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggc 267
>42462_sof-MIR408a:mirbase
Length = 283
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tgcactgcctcttccctggc 87
||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggc 264
>42052_osa-MIR408:mirbase
Length = 213
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 68 tgcactgcctcttccctggc 87
||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggc 173
