miRNEST 2.0, an integrative microRNA resource :: BLAST
>42480_ssp-MIR444c:mirbase
Length = 108
Score = 174 bits (88), Expect = 7e-45
Identities = 94/96 (97%)
Strand = Plus / Plus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaaattggtttttgaaccataccgatca 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||| |
Sbjct: 7 aagctagaggcagcaactgcatatcttgcaagaaaattggttttcgaaccataccgataa 66
Query: 61 ttttcttgcaagttgtgcagttgttgtctcaagctt 96
||||||||||||||||||||||||||||||||||||
Sbjct: 67 ttttcttgcaagttgtgcagttgttgtctcaagctt 102
>42086_osa-MIR444c:mirbase
Length = 138
Score = 127 bits (64), Expect = 2e-30
Identities = 88/96 (91%)
Strand = Plus / Plus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaaattggtttttgaaccataccgatca 60
||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| |
Sbjct: 23 aagctagagacagcaactgcatatcttgcaagaaaatcggttttatggccataccgatga 82
Query: 61 ttttcttgcaagttgtgcagttgttgtctcaagctt 96
|||||||||||| |||||||||||||||||||||||
Sbjct: 83 ttttcttgcaagctgtgcagttgttgtctcaagctt 118
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 60 attttcttgcaagttgtgcagttgttgtctcaagctt 96
||||||||||||| | |||||||| |||||| |||||
Sbjct: 59 attttcttgcaagatatgcagttgctgtctctagctt 23
>42085_osa-MIR444c:mirbase
Length = 138
Score = 127 bits (64), Expect = 2e-30
Identities = 88/96 (91%)
Strand = Plus / Plus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaaattggtttttgaaccataccgatca 60
||||||||| ||||||||||||||||||||||||||| |||||| |||||||||| |
Sbjct: 23 aagctagagacagcaactgcatatcttgcaagaaaatcggttttatggccataccgatga 82
Query: 61 ttttcttgcaagttgtgcagttgttgtctcaagctt 96
|||||||||||| |||||||||||||||||||||||
Sbjct: 83 ttttcttgcaagctgtgcagttgttgtctcaagctt 118
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 60 attttcttgcaagttgtgcagttgttgtctcaagctt 96
||||||||||||| | |||||||| |||||| |||||
Sbjct: 59 attttcttgcaagatatgcagttgctgtctctagctt 23
>42084_osa-MIR444b:mirbase
Length = 138
Score = 99.6 bits (50), Expect = 4e-22
Identities = 84/94 (89%), Gaps = 6/94 (6%)
Strand = Plus / Plus
Query: 9 ggcagcaactgcatatcttgcaagaaaatt-----ggtttttga-accataccgatcatt 62
||||||||||||| ||||||||||||||| ||||||| | ||||||||||| |||
Sbjct: 27 ggcagcaactgcacatcttgcaagaaaatctttagggtttttcagaccataccgatgatt 86
Query: 63 ttcttgcaagttgtgcagttgttgtctcaagctt 96
||||||||||||||||||||||||||||||||||
Sbjct: 87 ttcttgcaagttgtgcagttgttgtctcaagctt 120
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 60 attttcttgcaagttgtgcagttgttgtctcaagctt 96
||||||||||||| |||||||||| || | |||||||
Sbjct: 55 attttcttgcaagatgtgcagttgctgccacaagctt 19
>42083_osa-MIR444b:mirbase
Length = 138
Score = 99.6 bits (50), Expect = 4e-22
Identities = 84/94 (89%), Gaps = 6/94 (6%)
Strand = Plus / Plus
Query: 9 ggcagcaactgcatatcttgcaagaaaatt-----ggtttttga-accataccgatcatt 62
||||||||||||| ||||||||||||||| ||||||| | ||||||||||| |||
Sbjct: 27 ggcagcaactgcacatcttgcaagaaaatctttagggtttttcagaccataccgatgatt 86
Query: 63 ttcttgcaagttgtgcagttgttgtctcaagctt 96
||||||||||||||||||||||||||||||||||
Sbjct: 87 ttcttgcaagttgtgcagttgttgtctcaagctt 120
Score = 42.1 bits (21), Expect = 7e-05
Identities = 33/37 (89%)
Strand = Plus / Minus
Query: 60 attttcttgcaagttgtgcagttgttgtctcaagctt 96
||||||||||||| |||||||||| || | |||||||
Sbjct: 55 attttcttgcaagatgtgcagttgctgccacaagctt 19
>42478_ssp-MIR444a:mirbase
Length = 105
Score = 63.9 bits (32), Expect = 2e-11
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 61 ttttcttgcaagttgtgcagttgttgtctcaagctt 96
|||||||||||||||||||||||||| |||||||||
Sbjct: 69 ttttcttgcaagttgtgcagttgttgcctcaagctt 104
Score = 40.1 bits (20), Expect = 3e-04
Identities = 32/36 (88%)
Strand = Plus / Minus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaaa 36
||||| |||||| |||||||| | ||||||||||||
Sbjct: 104 aagcttgaggcaacaactgcacaacttgcaagaaaa 69
>42479_ssp-MIR444b:mirbase
Length = 106
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 62 tttcttgcaagttgtgcagttgttgtctcaagctt 96
||||||||||||||||||||||||| |||||||||
Sbjct: 71 tttcttgcaagttgtgcagttgttgcctcaagctt 105
>42091_osa-MIR444f:mirbase
Length = 154
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 62 tttcttgcaagttgtgcagttgttgtctcaagctt 96
||||||||||||||||||||||||| |||||||||
Sbjct: 110 tttcttgcaagttgtgcagttgttgcctcaagctt 144
>41894_hvu-MIR444b:mirbase
Length = 121
Score = 61.9 bits (31), Expect = 8e-11
Identities = 34/35 (97%)
Strand = Plus / Plus
Query: 62 tttcttgcaagttgtgcagttgttgtctcaagctt 96
|||||||||||||||||||||| ||||||||||||
Sbjct: 78 tttcttgcaagttgtgcagttgctgtctcaagctt 112
>42089_osa-MIR444d:mirbase
Length = 143
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 62 tttcttgcaagttgtgcagttgttgtctcaagctt 96
|||||||||||||||||||||| || |||||||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagctt 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaa 35
||||| ||||||||||||||| | |||||||||||
Sbjct: 123 aagcttgaggcagcaactgcacaacttgcaagaaa 89
>42088_osa-MIR444d:mirbase
Length = 143
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 62 tttcttgcaagttgtgcagttgttgtctcaagctt 96
|||||||||||||||||||||| || |||||||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagctt 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaa 35
||||| ||||||||||||||| | |||||||||||
Sbjct: 123 aagcttgaggcagcaactgcacaacttgcaagaaa 89
>42087_osa-MIR444d:mirbase
Length = 143
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 62 tttcttgcaagttgtgcagttgttgtctcaagctt 96
|||||||||||||||||||||| || |||||||||
Sbjct: 89 tttcttgcaagttgtgcagttgctgcctcaagctt 123
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaa 35
||||| ||||||||||||||| | |||||||||||
Sbjct: 123 aagcttgaggcagcaactgcacaacttgcaagaaa 89
>42082_osa-MIR444a:mirbase
Length = 131
Score = 54.0 bits (27), Expect = 2e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 50 cataccgatcattttcttgcaagttgtgcagttgttgtctcaagctt 96
||||||||| || |||||||||||| |||||||| || |||||||||
Sbjct: 68 cataccgatgatattcttgcaagttatgcagttgctgcctcaagctt 114
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaa 34
||||| ||||||||||||||||| ||||||||||
Sbjct: 114 aagcttgaggcagcaactgcataacttgcaagaa 81
>42081_osa-MIR444a:mirbase
Length = 131
Score = 54.0 bits (27), Expect = 2e-08
Identities = 42/47 (89%)
Strand = Plus / Plus
Query: 50 cataccgatcattttcttgcaagttgtgcagttgttgtctcaagctt 96
||||||||| || |||||||||||| |||||||| || |||||||||
Sbjct: 68 cataccgatgatattcttgcaagttatgcagttgctgcctcaagctt 114
Score = 52.0 bits (26), Expect = 7e-08
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaa 34
||||| ||||||||||||||||| ||||||||||
Sbjct: 114 aagcttgaggcagcaactgcataacttgcaagaa 81
>42649_tae-MIR444b:mirbase
Length = 162
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 62 tttcttgcaagttgtgcagttgttgtctcaagctt 96
|||||||||||| ||||||||| || |||||||||
Sbjct: 110 tttcttgcaagtcgtgcagttgctgcctcaagctt 144
>42648_tae-MIR444:mirbase
Length = 426
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaa 35
||||| |||||||||||||||| |||||||||||
Sbjct: 168 aagcttgaggcagcaactgcatgacttgcaagaaa 134
>42090_osa-MIR444e:mirbase
Length = 140
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 aagctagaggcagcaactgcatatcttgcaagaaa 35
|||||||||||| |||||||||| ||||| |||||
Sbjct: 22 aagctagaggcaccaactgcataacttgcgagaaa 56
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Minus
Query: 1 aagctagaggcagcaactgcatatcttgc 29
||||| ||||||||||||||||| |||||
Sbjct: 119 aagcttgaggcagcaactgcataacttgc 91
>41893_hvu-MIR444a:mirbase
Length = 114
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 62 tttcttgcaagttgtgcagttgttgtctcaagctt 96
|||||||||||| ||||||||| || |||||||||
Sbjct: 73 tttcttgcaagtcgtgcagttgctgcctcaagctt 107
