miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00073;mir-156;AASG02007590.1/3624-3708 3988:Ricinus communis
(castor bean)
Length = 85
Score = 60.0 bits (30), Expect = 4e-09
Identities = 67/78 (85%), Gaps = 1/78 (1%)
Strand = Plus / Plus
Query: 1 cagaagagagagagcacaacccgagaaatggtcaaagaatcttttacctttgttgggagt 60
||||||||||||||||||||||| | || ||||| ||||| ||||||||||||||
Sbjct: 5 cagaagagagagagcacaacccggcattaggctaaagagtctttg-cctttgttgggagt 63
Query: 61 gtgctctctactcttctg 78
||||||||| ||||||||
Sbjct: 64 gtgctctctcctcttctg 81
>RF00073;mir-156;AP008215.1/18234552-18234465 39947:Oryza sativa
Japonica Group
Length = 88
Score = 46.1 bits (23), Expect = 6e-05
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagagagcacaacccg 23
|||||||||||||||||||||||
Sbjct: 5 cagaagagagagagcacaacccg 27
>RF00073;mir-156;ABXC01001444.1/103334-103247 4558:Sorghum bicolor
(sorghum)
Length = 88
Score = 44.1 bits (22), Expect = 3e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 cagaagagagagagcacaaccc 22
||||||||||||||||||||||
Sbjct: 5 cagaagagagagagcacaaccc 26
