miRNEST 2.0, an integrative microRNA resource :: BLAST
>40433_gma-MIR159b:mirbase
Length = 186
Score = 79.8 bits (40), Expect = 8e-16
Identities = 62/68 (91%), Gaps = 1/68 (1%)
Strand = Plus / Plus
Query: 124 aagggtttgcatgaactgggagacgaggctaccttgatctttttggtattggagtgaagg 183
||||||||||||| |||||||| ||| |||||||||||||| ||||||||||||||||
Sbjct: 110 aagggtttgcatgccctgggagatgagtttaccttgatctttt-ggtattggagtgaagg 168
Query: 184 gagctcca 191
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Sbjct: 169 gagctcca 176
>41304_ptc-MIR159f:mirbase
Length = 201
Score = 69.9 bits (35), Expect = 7e-13
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 115 gcgcagtctaagggtttgcatgaactgggagacgaggctaccttgatctttttggtattg 174
|||||| |||||||| ||||||| || ||||||| || |||| ||| | |||| ||||||
Sbjct: 117 gcgcaggctaagggtctgcatgacctaggagacgtggttaccctgaccctttttgtattg 176
Query: 175 gagtgaagggagctc 189
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Sbjct: 177 gagtgaagggagctc 191
Score = 50.1 bits (25), Expect = 7e-07
Identities = 71/85 (83%), Gaps = 1/85 (1%)
Strand = Plus / Plus
Query: 19 aatggagctctctgaactccaagtctggaaggaggt-gatggtaggccacggctgctagt 77
|||||||||||| |||||| | ||| |||||| | |||||||| ||| ||||||||||
Sbjct: 8 aatggagctctccccactccatgcctgaaaggagttcgatggtagaccatggctgctagt 67
Query: 78 ccatgaacacccgtggttgcgcaga 102
|||||| |||| ||| ||||||||
Sbjct: 68 tcatgaatacccttgggtgcgcaga 92
>40434_gma-MIR159c:mirbase
Length = 185
Score = 65.9 bits (33), Expect = 1e-11
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 126 gggtttgcatgaactgggagacgaggctaccttgatctttttggtattggagtgaaggga 185
|||| |||||||| | | ||||| ||||||||||||||||| | ||||||||||||||||
Sbjct: 110 gggtctgcatgaatttgaagacggggctaccttgatcttttag-tattggagtgaaggga 168
Query: 186 gctcc 190
|||||
Sbjct: 169 gctcc 173
>41303_ptc-MIR159e:mirbase
Length = 192
Score = 63.9 bits (32), Expect = 5e-11
Identities = 65/76 (85%)
Strand = Plus / Plus
Query: 115 gcgcagtctaagggtttgcatgaactgggagacgaggctaccttgatctttttggtattg 174
|||||| |||||||| |||||| || ||||| | || | |||||||||||||||| |||
Sbjct: 107 gcgcaggctaagggtctgcatgtgctaggagatgtggttgccttgatctttttggtcttg 166
Query: 175 gagtgaagggagctcc 190
| ||||||||||||||
Sbjct: 167 gggtgaagggagctcc 182
>41570_vvi-MIR159a:mirbase
Length = 194
Score = 48.1 bits (24), Expect = 3e-06
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 126 gggtttgcatgaactgggagacgaggctaccttgatctttttggtattggagtgaaggga 185
|||| ||||||| || ||||| | || | ||||||||||| ||| ||||||||||||||
Sbjct: 119 gggtgtgcatgacctcggagaagtggttgccttgatctttctggccttggagtgaaggga 178
Query: 186 gctc 189
||||
Sbjct: 179 gctc 182
