miRNEST 2.0, an integrative microRNA resource :: BLAST
>46464_miR1132:micropc
Length = 149
Score = 99.6 bits (50), Expect = 5e-22
Identities = 119/142 (83%)
Strand = Plus / Plus
Query: 1 ctccgttttataatgtaaaactttctagcattgcccacgttcatttatatgttaatgaat 60
|||||||| | ||||||| ||||||||||||||| || ||||| || || |||||||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
Query: 61 ctagatatatttatgtgtttaaattcattaacatctatatgtatatgagcaatgttagaa 120
|||| |||| |||||||||| |||||||||| ||||||| ||||| | | || |||||
Sbjct: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
Query: 121 attcttatattatgaaacggag 142
| || || ||||||||||||||
Sbjct: 124 aatcctacattatgaaacggag 145
Score = 60.0 bits (30), Expect = 5e-10
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 1 ctccgttttataatgtaaaactttctagcattgcccacgttcatttatatgttaatgaat 60
|||||||| |||||||| | ||||||||| | |||| || || || | ||||||||||
Sbjct: 145 ctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaatgaat 86
Query: 61 ctagatatatttatgtgtttaaattcattaacatctatatgtatatgagcaatgttagaa 120
||| | | || ||| || || ||||||||| ||||||||| ||||| |||||| |||||
Sbjct: 85 ctaaacacatatatatgcctagattcattaatatctatatgaatatgtgcaatgctagaa 26
Query: 121 attcttatattatgaaacggag 142
| | ||| ||| ||||||||||
Sbjct: 25 agtattacattgtgaaacggag 4
>45514_miR1132:micropc
Length = 149
Score = 99.6 bits (50), Expect = 5e-22
Identities = 119/142 (83%)
Strand = Plus / Plus
Query: 1 ctccgttttataatgtaaaactttctagcattgcccacgttcatttatatgttaatgaat 60
|||||||| | ||||||| ||||||||||||||| || ||||| || || |||||||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
Query: 61 ctagatatatttatgtgtttaaattcattaacatctatatgtatatgagcaatgttagaa 120
|||| |||| |||||||||| |||||||||| ||||||| ||||| | | || |||||
Sbjct: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
Query: 121 attcttatattatgaaacggag 142
| || || ||||||||||||||
Sbjct: 124 aatcctacattatgaaacggag 145
Score = 60.0 bits (30), Expect = 5e-10
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 1 ctccgttttataatgtaaaactttctagcattgcccacgttcatttatatgttaatgaat 60
|||||||| |||||||| | ||||||||| | |||| || || || | ||||||||||
Sbjct: 145 ctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaatgaat 86
Query: 61 ctagatatatttatgtgtttaaattcattaacatctatatgtatatgagcaatgttagaa 120
||| | | || ||| || || ||||||||| ||||||||| ||||| |||||| |||||
Sbjct: 85 ctaaacacatatatatgcctagattcattaatatctatatgaatatgtgcaatgctagaa 26
Query: 121 attcttatattatgaaacggag 142
| | ||| ||| ||||||||||
Sbjct: 25 agtattacattgtgaaacggag 4
>45099_miR1132:micropc
Length = 149
Score = 99.6 bits (50), Expect = 5e-22
Identities = 119/142 (83%)
Strand = Plus / Plus
Query: 1 ctccgttttataatgtaaaactttctagcattgcccacgttcatttatatgttaatgaat 60
|||||||| | ||||||| ||||||||||||||| || ||||| || || |||||||||
Sbjct: 4 ctccgtttcacaatgtaatactttctagcattgcacatattcatatagatattaatgaat 63
Query: 61 ctagatatatttatgtgtttaaattcattaacatctatatgtatatgagcaatgttagaa 120
|||| |||| |||||||||| |||||||||| ||||||| ||||| | | || |||||
Sbjct: 64 ctaggcatatatatgtgtttagattcattaacttctatataaatatgggtagtgctagaa 123
Query: 121 attcttatattatgaaacggag 142
| || || ||||||||||||||
Sbjct: 124 aatcctacattatgaaacggag 145
Score = 60.0 bits (30), Expect = 5e-10
Identities = 114/142 (80%)
Strand = Plus / Minus
Query: 1 ctccgttttataatgtaaaactttctagcattgcccacgttcatttatatgttaatgaat 60
|||||||| |||||||| | ||||||||| | |||| || || || | ||||||||||
Sbjct: 145 ctccgtttcataatgtaggattttctagcactacccatatttatatagaagttaatgaat 86
Query: 61 ctagatatatttatgtgtttaaattcattaacatctatatgtatatgagcaatgttagaa 120
||| | | || ||| || || ||||||||| ||||||||| ||||| |||||| |||||
Sbjct: 85 ctaaacacatatatatgcctagattcattaatatctatatgaatatgtgcaatgctagaa 26
Query: 121 attcttatattatgaaacggag 142
| | ||| ||| ||||||||||
Sbjct: 25 agtattacattgtgaaacggag 4
>44978_miR1130:micropc
Length = 144
Score = 75.8 bits (38), Expect = 8e-15
Identities = 113/138 (81%)
Strand = Plus / Plus
Query: 1 ctccgttttataatgtaaaactttctagcattgcccacgttcatttatatgttaatgaat 60
|||||||| ||||||||| |||||||||||||| |||| || || |||||| ||||||||
Sbjct: 2 ctccgtttcataatgtaagactttctagcattgtccacatttatatatatgctaatgaat 61
Query: 61 ctagatatatttatgtgtttaaattcattaacatctatatgtatatgagcaatgttagaa 120
||| | | ||| |||||| ||| ||| ||||||||||| ||| | |||| |||||
Sbjct: 62 ctaagcacacatatatgtttagatttattgacatctatatgaatacaggtaatgctagaa 121
Query: 121 attcttatattatgaaac 138
| ||||| ||||||||||
Sbjct: 122 agtcttacattatgaaac 139
Score = 60.0 bits (30), Expect = 5e-10
Identities = 111/138 (80%)
Strand = Plus / Minus
Query: 5 gttttataatgtaaaactttctagcattgcccacgttcatttatatgttaatgaatctag 64
|||| ||||||||| ||||||||||||| || ||||| || |||| ||| ||||||
Sbjct: 139 gtttcataatgtaagactttctagcattacctgtattcatatagatgtcaataaatctaa 80
Query: 65 atatatttatgtgtttaaattcattaacatctatatgtatatgagcaatgttagaaattc 124
| |||| | |||| ||| |||||||| ||| ||||| || || ||||| |||||| ||
Sbjct: 79 acatatatgtgtgcttagattcattagcatatatataaatgtggacaatgctagaaagtc 20
Query: 125 ttatattatgaaacggag 142
||| ||||||||||||||
Sbjct: 19 ttacattatgaaacggag 2
>46437_miR1436:micropc
Length = 108
Score = 71.9 bits (36), Expect = 1e-13
Identities = 54/60 (90%)
Strand = Plus / Plus
Query: 83 attcattaacatctatatgtatatgagcaatgttagaaattcttatattatgaaacggag 142
||||||||| |||||||||||| || |||||| |||||| ||||| ||||||||||||||
Sbjct: 44 attcattaatatctatatgtatgtgggcaatgctagaaaatcttacattatgaaacggag 103
Score = 56.0 bits (28), Expect = 7e-09
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 1 ctccgttttataatgtaaaactttctagcattgcccacgttcatttatatgttaatgaat 60
|||||||| ||||||||| | ||||||||||||||||| | ||| || || |||||||||
Sbjct: 103 ctccgtttcataatgtaagattttctagcattgcccacatacatatagatattaatgaat 44
>46801_miR809:micropc
Length = 110
Score = 67.9 bits (34), Expect = 2e-12
Identities = 67/78 (85%)
Strand = Plus / Plus
Query: 23 ttctagcattgcccacgttcatttatatgttaatgaatctagatatatttatgtgtttaa 82
||||| |||| ||||| ||||| | ||||||||||||||||||| || ||| ||||||
Sbjct: 2 ttctatcatttcccacattcatattaatgttaatgaatctagatagatatatatgtttag 61
Query: 83 attcattaacatctatat 100
||||||||||||| ||||
Sbjct: 62 attcattaacatcaatat 79
>45260_miR819:micropc
Length = 116
Score = 67.9 bits (34), Expect = 2e-12
Identities = 70/81 (86%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 20 actttctagcattgcccacgttcatttatatgttaatgaatctagatatatttatgtgtt 79
||||||||||||| ||| ||||| |||||||||||||||||| | ||| |||||||
Sbjct: 8 actttctagcattatccatattcatatatatgttaatgaatctaaacata--tatgtgtc 65
Query: 80 taaattcattaacatctatat 100
|| ||||||||||||||||||
Sbjct: 66 tatattcattaacatctatat 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 76 tgtttaaattcattaacatctatatgtatatgagcaatgttagaaattcttata 129
|||||| |||||||||||| |||||| ||||| |||| |||||| |||||||
Sbjct: 55 tgtttagattcattaacatatatatgaatatggataatgctagaaagtcttata 2
>45075_miR819:micropc
Length = 116
Score = 67.9 bits (34), Expect = 2e-12
Identities = 70/81 (86%), Gaps = 2/81 (2%)
Strand = Plus / Plus
Query: 20 actttctagcattgcccacgttcatttatatgttaatgaatctagatatatttatgtgtt 79
||||||||||||| ||| ||||| |||||||||||||||||| | ||| |||||||
Sbjct: 8 actttctagcattatccatattcatatatatgttaatgaatctaaacata--tatgtgtc 65
Query: 80 taaattcattaacatctatat 100
|| ||||||||||||||||||
Sbjct: 66 tatattcattaacatctatat 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 46/54 (85%)
Strand = Plus / Minus
Query: 76 tgtttaaattcattaacatctatatgtatatgagcaatgttagaaattcttata 129
|||||| |||||||||||| |||||| ||||| |||| |||||| |||||||
Sbjct: 55 tgtttagattcattaacatatatatgaatatggataatgctagaaagtcttata 2
>45687_miR819:micropc
Length = 84
Score = 65.9 bits (33), Expect = 8e-12
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 20 actttctagcattgcccacgttcatttatatgttaatgaat 60
||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 72 actttctagcattgcccacattcatatatatgttaatgaat 32
Score = 50.1 bits (25), Expect = 4e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 83 attcattaacatctatatgtatatgagcaatgttagaaattcttatattatga 135
|||||||||||| |||||| || || |||||| |||||| ||||||| |||||
Sbjct: 32 attcattaacatatatatgaatgtgggcaatgctagaaagtcttataatatga 84
>46670_miR809:micropc
Length = 97
Score = 63.9 bits (32), Expect = 3e-11
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 23 ttctagcattgcccacgttcatttatatgttaatgaatctagatatatttatgtgtttaa 82
||||| |||| ||||| ||||| ||||||||||||||| |||| |||| | ||||| ||
Sbjct: 97 ttctaacattacccacattcatatatatgttaatgaatgtagacatatatgtgtgtctag 38
Query: 83 attcattaacatctat 98
||| ||||||||||||
Sbjct: 37 atttattaacatctat 22
Score = 40.1 bits (20), Expect = 4e-04
Identities = 59/72 (81%)
Strand = Plus / Plus
Query: 49 atgttaatgaatctagatatatttatgtgtttaaattcattaacatctatatgtatatga 108
|||||||| |||||||| | | ||| ||| || |||||||||||| |||||| || ||
Sbjct: 26 atgttaataaatctagacacacatatatgtctacattcattaacatatatatgaatgtgg 85
Query: 109 gcaatgttagaa 120
| ||||||||||
Sbjct: 86 gtaatgttagaa 97
>44980_miR808:micropc
Length = 97
Score = 63.9 bits (32), Expect = 3e-11
Identities = 65/76 (85%)
Strand = Plus / Minus
Query: 23 ttctagcattgcccacgttcatttatatgttaatgaatctagatatatttatgtgtttaa 82
||||| |||| ||||| ||||| ||||||||||||||| |||| |||| | ||||| ||
Sbjct: 97 ttctaacattacccacattcatatatatgttaatgaatgtagacatatatgtgtgtctag 38
Query: 83 attcattaacatctat 98
||| ||||||||||||
Sbjct: 37 atttattaacatctat 22
Score = 40.1 bits (20), Expect = 4e-04
Identities = 59/72 (81%)
Strand = Plus / Plus
Query: 49 atgttaatgaatctagatatatttatgtgtttaaattcattaacatctatatgtatatga 108
|||||||| |||||||| | | ||| ||| || |||||||||||| |||||| || ||
Sbjct: 26 atgttaataaatctagacacacatatatgtctacattcattaacatatatatgaatgtgg 85
Query: 109 gcaatgttagaa 120
| ||||||||||
Sbjct: 86 gtaatgttagaa 97
>45731_miR446:micropc
Length = 86
Score = 58.0 bits (29), Expect = 2e-09
Identities = 62/73 (84%)
Strand = Plus / Minus
Query: 29 cattgcccacgttcatttatatgttaatgaatctagatatatttatgtgtttaaattcat 88
|||||||||| ||||| | ||||||||||||||||| | | ||| |||||| ||||||
Sbjct: 86 cattgcccacattcatattgatgttaatgaatctagacacacatatatgtttagattcat 27
Query: 89 taacatctatatg 101
||| |||||||||
Sbjct: 26 taaaatctatatg 14
Score = 52.0 bits (26), Expect = 1e-07
Identities = 71/86 (82%)
Strand = Plus / Plus
Query: 29 cattgcccacgttcatttatatgttaatgaatctagatatatttatgtgtttaaattcat 88
||||| |||| ||||| || || |||||||||||| | |||| | ||||| || ||||||
Sbjct: 1 cattgtccacattcatatagattttaatgaatctaaacatatatgtgtgtctagattcat 60
Query: 89 taacatctatatgtatatgagcaatg 114
||||||| ||||| || || ||||||
Sbjct: 61 taacatcaatatgaatgtgggcaatg 86
>46833_miR446:micropc
Length = 81
Score = 50.1 bits (25), Expect = 4e-07
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 49 atgttaatgaatctagatatatttatgtgtttaaattcattaacatctatatg 101
||||||||||||||||| ||| ||| | | |||||||||||||||| |||||
Sbjct: 16 atgttaatgaatctagacatacatatctatctaaattcattaacatcaatatg 68
Score = 40.1 bits (20), Expect = 4e-04
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 49 atgttaatgaatctagatatatttatgtgtttaaattcattaacatctatat 100
|||||||||||| |||||| || | | ||| || ||||||||||||| ||||
Sbjct: 61 atgttaatgaatttagatagatatgtatgtctagattcattaacatcaatat 10
>46775_miR808:micropc
Length = 98
Score = 48.1 bits (24), Expect = 2e-06
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 49 atgttaatgaatctagatatatttatgtgtttaaattcattaacatctatatgtatatga 108
|||||||| |||||||||| || ||| | |||| ||||||||||||| ||||| || ||
Sbjct: 28 atgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgtgg 86
Query: 109 gcaatgttagaa 120
| ||||||||||
Sbjct: 87 gaaatgttagaa 98
>45913_miR809:micropc
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 61/72 (84%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 49 atgttaatgaatctagatatatttatgtgtttaaattcattaacatctatatgtatatga 108
|||||||| |||||||||| || ||| | |||| ||||||||||||| ||||| || ||
Sbjct: 29 atgttaataaatctagatagatatatat-tttagattcattaacatcaatatgaatgtgg 87
Query: 109 gcaatgttagaa 120
| ||||||||||
Sbjct: 88 gaaatgttagaa 99
>45708_miR809:micropc
Length = 100
Score = 48.1 bits (24), Expect = 2e-06
Identities = 57/68 (83%)
Strand = Plus / Minus
Query: 53 taatgaatctagatatatttatgtgtttaaattcattaacatctatatgtatatgagcaa 112
||||||||||||| |||| ||| | | || ||||||||| ||| ||||| |||||| ||
Sbjct: 69 taatgaatctagacatatatatctatctagattcattaatatcaatatgaatatgaaaaa 10
Query: 113 tgttagaa 120
||||||||
Sbjct: 9 tgttagaa 2
Score = 42.1 bits (21), Expect = 1e-04
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 52 ttaatgaatctagatatatttatgtgtttaaattcattaacatctatat 100
|||||||||||||||| || ||| ||| || |||||||| |||| ||||
Sbjct: 31 ttaatgaatctagatagatatatatgtctagattcattagcatcaatat 79
>46637_miR446:micropc
Length = 80
Score = 46.1 bits (23), Expect = 7e-06
Identities = 50/59 (84%)
Strand = Plus / Plus
Query: 49 atgttaatgaatctagatatatttatgtgtttaaattcattaacatctatatgtatatg 107
||||||||||||||||| |||| ||| | || ||||||||||||| ||||| |||||
Sbjct: 17 atgttaatgaatctagacatatatatctagctagattcattaacatcaatatgaatatg 75
Score = 44.1 bits (22), Expect = 3e-05
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 49 atgttaatgaatctagatatatttatgtgtttaaattcattaacat 94
|||||||||||||||| || || ||| ||| || ||||||||||||
Sbjct: 62 atgttaatgaatctagctagatatatatgtctagattcattaacat 17
>45522_miR809:micropc
Length = 100
Score = 46.1 bits (23), Expect = 7e-06
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 49 atgttaatgaatctagatatatttatgtgtttaaattcattaacatc 95
||||||||||||||||||| || || ||| || |||||||||||||
Sbjct: 73 atgttaatgaatctagatagatacatatgtctagattcattaacatc 27
Score = 46.1 bits (23), Expect = 7e-06
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 49 atgttaatgaatctagatatatttatgtgtttaaattcattaacatc 95
||||||||||||||||| |||| ||| | | || |||||||||||||
Sbjct: 28 atgttaatgaatctagacatatgtatctatctagattcattaacatc 74
>46758_miR808:micropc
Length = 98
Score = 44.1 bits (22), Expect = 3e-05
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 49 atgttaatgaatctagatatatttatgtgtttaaattcattaacatctatatgtatatga 108
|||||||||||||||||| || ||| ||| || |||| ||| |||| ||||| ||||||
Sbjct: 72 atgttaatgaatctagatggatatatatgtctagattcgttagcatcaatatgaatatga 13
Query: 109 gcaatg 114
| ||||
Sbjct: 12 gaaatg 7
>45342_miR809:micropc
Length = 100
Score = 44.1 bits (22), Expect = 3e-05
Identities = 55/66 (83%)
Strand = Plus / Minus
Query: 49 atgttaatgaatctagatatatttatgtgtttaaattcattaacatctatatgtatatga 108
|||||||||||||||||| || ||| ||| || |||| ||| |||| ||||| ||||||
Sbjct: 73 atgttaatgaatctagatggatatatatgtctagattcgttagcatcaatatgaatatga 14
Query: 109 gcaatg 114
| ||||
Sbjct: 13 gaaatg 8
>45995_miR446:micropc
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 46/53 (86%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 49 atgttaatgaatctagatatatttatgtgtttaaattcattaacatctatatg 101
|||||||| |||||||||| || ||| | |||| ||||||||||||| |||||
Sbjct: 22 atgttaataaatctagatagatatatat-tttagattcattaacatcaatatg 73
>45717_miR446:micropc
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 46/53 (86%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 49 atgttaatgaatctagatatatttatgtgtttaaattcattaacatctatatg 101
|||||||| |||||||||| || ||| | |||| ||||||||||||| |||||
Sbjct: 22 atgttaataaatctagatagatatatat-tttagattcattaacatcaatatg 73
>45603_miR819:micropc
Length = 61
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 20 actttctagcattgcccacgttcat 44
||||||||||||||||||| |||||
Sbjct: 13 actttctagcattgcccacattcat 37
>45176_miR446:micropc
Length = 86
Score = 42.1 bits (21), Expect = 1e-04
Identities = 46/53 (86%), Gaps = 1/53 (1%)
Strand = Plus / Plus
Query: 49 atgttaatgaatctagatatatttatgtgtttaaattcattaacatctatatg 101
|||||||| |||||||||| || ||| | |||| ||||||||||||| |||||
Sbjct: 22 atgttaataaatctagatagatatatat-tttagattcattaacatcaatatg 73
