miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46519_miR444:micropc
Length = 59
Score = 117 bits (59), Expect = 8e-28
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 1 acttgcaagaaagtcacaaaatcaattgcagaccatacttgtggctttcttgcaagttg 59
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 acttgcaagaaagtcacaaaatcaattgcagaccatacttgtggctttcttgcaagttg 59
>45226_miR444:micropc
Length = 60
Score = 95.6 bits (48), Expect = 3e-21
Identities = 58/60 (96%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 1 acttgcaagaaagtcacaaaatcaattgca-gaccatacttgtggctttcttgcaagttg 59
|||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||
Sbjct: 1 acttgcaagaaagtcacaaaatcaattgcaggatcatacttgtggctttcttgcaagttg 60
>46635_miR444:micropc
Length = 59
Score = 93.7 bits (47), Expect = 1e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 1 acttgcaagaaagtcacaaaatcaattgcagaccatacttgtggctttcttgcaagttg 59
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 1 acttgcaagaaagtcacaaaatcaattgcaggacatacttgtggttttcttgcaagttg 59
>45742_miR444:micropc
Length = 103
Score = 93.7 bits (47), Expect = 1e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 1 acttgcaagaaagtcacaaaatcaattgcagaccatacttgtggctttcttgcaagttg 59
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 24 acttgcaagaaagtcacaaaatcaattgcaggacatacttgtggttttcttgcaagttg 82
>45712_miR444:micropc
Length = 103
Score = 93.7 bits (47), Expect = 1e-20
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 1 acttgcaagaaagtcacaaaatcaattgcagaccatacttgtggctttcttgcaagttg 59
||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||
Sbjct: 24 acttgcaagaaagtcacaaaatcaattgcaggacatacttgtggttttcttgcaagttg 82
>46669_miR444:micropc
Length = 136
Score = 79.8 bits (40), Expect = 2e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 20 aatcaattgcagaccatacttgtggctttcttgcaagttg 59
||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 aatcaattgcagaccatacttgtggctttcttgcaagttg 115
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 acttgcaagaaagtcacaa 19
|||||||||||||||||||
Sbjct: 24 acttgcaagaaagtcacaa 42
>46544_miR444:micropc
Length = 136
Score = 79.8 bits (40), Expect = 2e-16
Identities = 40/40 (100%)
Strand = Plus / Plus
Query: 20 aatcaattgcagaccatacttgtggctttcttgcaagttg 59
||||||||||||||||||||||||||||||||||||||||
Sbjct: 76 aatcaattgcagaccatacttgtggctttcttgcaagttg 115
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 acttgcaagaaagtcacaa 19
|||||||||||||||||||
Sbjct: 24 acttgcaagaaagtcacaa 42
>46570_miR444:micropc
Length = 173
Score = 54.0 bits (27), Expect = 1e-08
Identities = 40/43 (93%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 18 aaaatcaattgca-gaccatacttgtggctttcttgcaagttg 59
|||||| |||||| || ||||||||||||||||||||||||||
Sbjct: 131 aaaatccattgcaagatcatacttgtggctttcttgcaagttg 173
Score = 38.2 bits (19), Expect = 6e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 acttgcaagaaagtcacaa 19
|||||||||||||||||||
Sbjct: 1 acttgcaagaaagtcacaa 19
>46601_miR444:micropc
Length = 151
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 32 accatacttgtggctttcttgcaagt 57
||||||||||||||||||||||||||
Sbjct: 98 accatacttgtggctttcttgcaagt 123
>46197_miR444:micropc
Length = 95
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 32 accatacttgtggctttcttgcaagt 57
||||||||||||||||||||||||||
Sbjct: 70 accatacttgtggctttcttgcaagt 95
>46182_miR444:micropc
Length = 144
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 32 accatacttgtggctttcttgcaagt 57
||||||||||||||||||||||||||
Sbjct: 96 accatacttgtggctttcttgcaagt 121
>46094_miR444:micropc
Length = 151
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 32 accatacttgtggctttcttgcaagt 57
||||||||||||||||||||||||||
Sbjct: 98 accatacttgtggctttcttgcaagt 123
>45904_miR444:micropc
Length = 141
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 32 accatacttgtggctttcttgcaagt 57
||||||||||||||||||||||||||
Sbjct: 93 accatacttgtggctttcttgcaagt 118
>45144_miR444:micropc
Length = 151
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 32 accatacttgtggctttcttgcaagt 57
||||||||||||||||||||||||||
Sbjct: 98 accatacttgtggctttcttgcaagt 123
>45055_miR444:micropc
Length = 95
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 32 accatacttgtggctttcttgcaagt 57
||||||||||||||||||||||||||
Sbjct: 70 accatacttgtggctttcttgcaagt 95
>44855_miR444:micropc
Length = 144
Score = 52.0 bits (26), Expect = 4e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 32 accatacttgtggctttcttgcaagt 57
||||||||||||||||||||||||||
Sbjct: 96 accatacttgtggctttcttgcaagt 121
>45665_miR444:micropc
Length = 111
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 tacttgtggctttcttgcaagttg 59
||||||||||||||||||||||||
Sbjct: 62 tacttgtggctttcttgcaagttg 85
>45334_miR444:micropc
Length = 101
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 tacttgtggctttcttgcaagttg 59
||||||||||||||||||||||||
Sbjct: 57 tacttgtggctttcttgcaagttg 80
>45001_miR444:micropc
Length = 57
Score = 48.1 bits (24), Expect = 6e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 36 tacttgtggctttcttgcaagttg 59
||||||||||||||||||||||||
Sbjct: 34 tacttgtggctttcttgcaagttg 57
