miRNEST 2.0, an integrative microRNA resource :: BLAST
>48539_gma-miR159a:pmrd
Length = 214
Score = 331 bits (167), Expect = 1e-91
Identities = 170/171 (99%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 23 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 82
Query: 61 cccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatatctggg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 83 cccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatatttggg 142
Query: 121 gagcttcatttgcctttatagtattaaccttctttggattgaagggagctc 171
|||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 143 gagcttcatttgcctttatagtattaaccttctttggattgaagggagctc 193
>54378_pvu-miR159:pmrd
Length = 174
Score = 248 bits (125), Expect = 1e-66
Identities = 160/171 (93%), Gaps = 3/171 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatatctggg 120
||||||||||||||||||| | | |||||||||||||||||||||||||||||||||
Sbjct: 64 cccacagttctacccatcagcatg---ttttgtggtagtcttgtggcttccatatctggg 120
Query: 121 gagcttcatttgcctttatagtattaaccttctttggattgaagggagctc 171
||||||||| ||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctc 171
>54377_pvu-miR159:pmrd
Length = 174
Score = 248 bits (125), Expect = 1e-66
Identities = 160/171 (93%), Gaps = 3/171 (1%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 4 gagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatggat 63
Query: 61 cccacagttctacccatcaataagtgcttttgtggtagtcttgtggcttccatatctggg 120
||||||||||||||||||| | | |||||||||||||||||||||||||||||||||
Sbjct: 64 cccacagttctacccatcagcatg---ttttgtggtagtcttgtggcttccatatctggg 120
Query: 121 gagcttcatttgcctttatagtattaaccttctttggattgaagggagctc 171
||||||||| ||||| |||||||| | ||||||||||||||||||||||||
Sbjct: 121 gagcttcatctgcctctatagtatcatccttctttggattgaagggagctc 171
>54777_vvi-miR159c:pmrd
Length = 190
Score = 77.8 bits (39), Expect = 2e-15
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
||||||||||||||||||| |||| ||||||||||| ||||||||||| | |||||||
Sbjct: 11 gagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatggat 70
Query: 61 cccacag 67
|||||||
Sbjct: 71 cccacag 77
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 148 ccttctttggattgaagggagctc 171
|||| |||||||||||||||||||
Sbjct: 155 ccttgtttggattgaagggagctc 178
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 67.9 bits (34), Expect = 2e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
||||||||||||||||||| |||| |||| |||||| ||| ||||||| ||||||||||
Sbjct: 8 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 67
Query: 61 cc 62
||
Sbjct: 68 cc 69
>51604_ptc-miR159c:pmrd
Length = 183
Score = 67.9 bits (34), Expect = 2e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
||||||||||||||||||| |||| |||| |||||| ||| ||||||| ||||||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
>51602_ptc-miR159a:pmrd
Length = 183
Score = 67.9 bits (34), Expect = 2e-12
Identities = 55/62 (88%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
||||||||||||||||||| |||| |||| |||||| ||| ||||||| ||||||||||
Sbjct: 13 gagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatggat 72
Query: 61 cc 62
||
Sbjct: 73 cc 74
>48699_mtr-miR159a:pmrd
Length = 168
Score = 56.0 bits (28), Expect = 9e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 89 tttgtggtagtcttgtggcttccatatctggggagc 124
||||||||||| ||||||||||||||||| ||||||
Sbjct: 87 tttgtggtagttttgtggcttccatatctagggagc 122
>51603_ptc-miR159b:pmrd
Length = 187
Score = 54.0 bits (27), Expect = 4e-08
Identities = 57/67 (85%)
Strand = Plus / Plus
Query: 1 gagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatggat 60
||||||||||||||||||| || | || | |||||| || |||||||| ||||||| ||
Sbjct: 13 gagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaat 72
Query: 61 cccacag 67
|||||||
Sbjct: 73 cccacag 79
>48395_bra-miR159a:pmrd
Length = 185
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctc 171
|||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctc 181
>48339_bna-miR159:pmrd
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctc 171
|||||||||||||||||||||||
Sbjct: 157 cttctttggattgaagggagctc 179
>46932_ath-miR159b:pmrd
Length = 196
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctc 171
|||||||||||||||||||||||
Sbjct: 164 cttctttggattgaagggagctc 186
>46931_ath-miR159a:pmrd
Length = 184
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 149 cttctttggattgaagggagctc 171
|||||||||||||||||||||||
Sbjct: 159 cttctttggattgaagggagctc 181
>54930_zma-miR159a:pmrd
Length = 246
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctc 225
>54674_tae-miR159b:pmrd
Length = 255
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctc 248
>54631_sof-miR159d:pmrd
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>54629_sof-miR159b:pmrd
Length = 266
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctc 245
>54628_sof-miR159a:pmrd
Length = 265
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctc 244
>54392_sar-miR159:pmrd
Length = 175
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctc 173
>51338_pgl-miR159:pmrd
Length = 226
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctc 224
>48825_osa-miR159m:pmrd
Length = 249
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctc 247
>48820_osa-miR159b:pmrd
Length = 188
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctc 176
>48819_osa-miR159a:pmrd
Length = 272
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
>48796_oru-miR159:pmrd
Length = 274
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 151 tctttggattgaagggagctc 171
|||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctc 260
