miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>48712_mtr-miR166b:pmrd
Length = 96
Score = 182 bits (92), Expect = 3e-47
Identities = 92/92 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttggctggctcgaggcttttcagtttcacaaaggaagttcagtcttaattgtat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 ggaatgttggctggctcgaggcttttcagtttcacaaaggaagttcagtcttaattgtat 62
Query: 61 gaactataaggcttcggaccaggcttcattcc 92
||||||||||||||||||||||||||||||||
Sbjct: 63 gaactataaggcttcggaccaggcttcattcc 94
>48551_gma-miR166o:pmrd
Length = 86
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 61 gaactataaggcttcggaccaggcttcattcc 92
||||||||||||||||||||||||||||||||
Sbjct: 53 gaactataaggcttcggaccaggcttcattcc 84
Score = 56.0 bits (28), Expect = 4e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttggctggctcgaggcttttca 28
||||||||||||||||||||||||||||
Sbjct: 3 ggaatgttggctggctcgaggcttttca 30
>51630_ptc-miR166f:pmrd
Length = 105
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 67 taaggcttcggaccaggcttcattcc 92
||||||||||||||||||||||||||
Sbjct: 69 taaggcttcggaccaggcttcattcc 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ggaatgttggctggctcgaggctt 24
||||||||||||||||||| ||||
Sbjct: 13 ggaatgttggctggctcgaagctt 36
>51628_ptc-miR166d:pmrd
Length = 105
Score = 52.0 bits (26), Expect = 7e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 67 taaggcttcggaccaggcttcattcc 92
||||||||||||||||||||||||||
Sbjct: 69 taaggcttcggaccaggcttcattcc 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 ggaatgttggctggctcgaggctt 24
||||||||||||||||||| ||||
Sbjct: 13 ggaatgttggctggctcgaagctt 36
>54794_vvi-miR166f:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttggctggctcgaggcttt 25
|||||||||||||||||||||||||
Sbjct: 12 ggaatgttggctggctcgaggcttt 36
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 gcttcggaccaggcttcattcc 92
||||||||||||||||||||||
Sbjct: 66 gcttcggaccaggcttcattcc 87
>54976_zma-miR166t:pmrd
Length = 76
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 ggcttcggaccaggcttcattcc 92
|||||||||||||||||||||||
Sbjct: 52 ggcttcggaccaggcttcattcc 74
>54975_zma-miR166s:pmrd
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 ggcttcggaccaggcttcattcc 92
|||||||||||||||||||||||
Sbjct: 54 ggcttcggaccaggcttcattcc 76
>54964_zma-miR166h:pmrd
Length = 76
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 ggcttcggaccaggcttcattcc 92
|||||||||||||||||||||||
Sbjct: 52 ggcttcggaccaggcttcattcc 74
>54962_zma-miR166f:pmrd
Length = 78
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 ggcttcggaccaggcttcattcc 92
|||||||||||||||||||||||
Sbjct: 54 ggcttcggaccaggcttcattcc 76
>54417_sbi-miR166b:pmrd
Length = 72
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 ggcttcggaccaggcttcattcc 92
|||||||||||||||||||||||
Sbjct: 48 ggcttcggaccaggcttcattcc 70
>48857_osa-miR166n:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 70 ggcttcggaccaggcttcattcc 92
|||||||||||||||||||||||
Sbjct: 60 ggcttcggaccaggcttcattcc 82
>54969_zma-miR166m:pmrd
Length = 156
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttggctggctcgaggc 22
||||||||||||||||||||||
Sbjct: 23 ggaatgttggctggctcgaggc 44
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 69 aggcttcggaccaggcttcattcc 92
|||| |||||||||||||||||||
Sbjct: 112 aggcgtcggaccaggcttcattcc 135
>54790_vvi-miR166b:pmrd
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttggctggctcgaggc 22
||||||||||||||||||||||
Sbjct: 12 ggaatgttggctggctcgaggc 33
>54421_sbi-miR166f:pmrd
Length = 139
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttggctggctcgaggc 22
||||||||||||||||||||||
Sbjct: 23 ggaatgttggctggctcgaggc 44
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 69 aggcttcggaccaggcttcattcc 92
|||| |||||||||||||||||||
Sbjct: 95 aggcgtcggaccaggcttcattcc 118
>51376_ppt-miR166i:pmrd
Length = 120
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 gcttcggaccaggcttcattcc 92
||||||||||||||||||||||
Sbjct: 71 gcttcggaccaggcttcattcc 92
>51374_ppt-miR166g:pmrd
Length = 146
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 gcttcggaccaggcttcattcc 92
||||||||||||||||||||||
Sbjct: 93 gcttcggaccaggcttcattcc 114
>51371_ppt-miR166d:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 gcttcggaccaggcttcattcc 92
||||||||||||||||||||||
Sbjct: 79 gcttcggaccaggcttcattcc 100
>51370_ppt-miR166c:pmrd
Length = 123
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 gcttcggaccaggcttcattcc 92
||||||||||||||||||||||
Sbjct: 74 gcttcggaccaggcttcattcc 95
>51369_ppt-miR166b:pmrd
Length = 103
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 gcttcggaccaggcttcattcc 92
||||||||||||||||||||||
Sbjct: 71 gcttcggaccaggcttcattcc 92
>51368_ppt-miR166a:pmrd
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 71 gcttcggaccaggcttcattcc 92
||||||||||||||||||||||
Sbjct: 71 gcttcggaccaggcttcattcc 92
>54963_zma-miR166g:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 7e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 68 aaggcttcggaccaggcttcattcc 92
|||| ||||||||||||||||||||
Sbjct: 100 aaggtttcggaccaggcttcattcc 124
>48851_osa-miR166h:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ggaatgttggctggctcgagg 21
|||||||||||||||||||||
Sbjct: 13 ggaatgttggctggctcgagg 33
>46945_ath-miR166a:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 72 cttcggaccaggcttcattcc 92
|||||||||||||||||||||
Sbjct: 132 cttcggaccaggcttcattcc 152
>54795_vvi-miR166g:pmrd
Length = 100
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcc 92
||||||||||||||||||||
Sbjct: 68 ttcggaccaggcttcattcc 87
>54543_sly-miR166a:pmrd
Length = 111
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcc 92
||||||||||||||||||||
Sbjct: 85 ttcggaccaggcttcattcc 104
>54418_sbi-miR166c:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcc 92
||||||||||||||||||||
Sbjct: 73 ttcggaccaggcttcattcc 92
>51856_ptc-miRf10034-akr:pmrd
Length = 97
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcc 92
||||||||||||||||||||
Sbjct: 71 ttcggaccaggcttcattcc 90
>51629_ptc-miR166e:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcc 92
||||||||||||||||||||
Sbjct: 76 ttcggaccaggcttcattcc 95
>51626_ptc-miR166b:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcc 92
||||||||||||||||||||
Sbjct: 76 ttcggaccaggcttcattcc 95
>51375_ppt-miR166h:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcc 92
||||||||||||||||||||
Sbjct: 77 ttcggaccaggcttcattcc 96
>51372_ppt-miR166e:pmrd
Length = 146
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcc 92
||||||||||||||||||||
Sbjct: 95 ttcggaccaggcttcattcc 114
>48846_osa-miR166c:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcc 92
||||||||||||||||||||
Sbjct: 90 ttcggaccaggcttcattcc 109
>48660_hvv-miR166:pmrd
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcc 92
||||||||||||||||||||
Sbjct: 57 ttcggaccaggcttcattcc 76
>48335_bdi-miR2509:pmrd
Length = 117
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcc 92
||||||||||||||||||||
Sbjct: 81 ttcggaccaggcttcattcc 100
>48307_bdi-miR166:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcc 92
||||||||||||||||||||
Sbjct: 84 ttcggaccaggcttcattcc 103
>46867_aqc-miR166b:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 73 ttcggaccaggcttcattcc 92
||||||||||||||||||||
Sbjct: 67 ttcggaccaggcttcattcc 86
