miRNEST 2.0, an integrative microRNA resource :: BLAST
>51712_ptc-miR319f:pmrd
Length = 202
Score = 93.7 bits (47), Expect = 4e-20
Identities = 156/185 (84%), Gaps = 13/185 (7%)
Strand = Plus / Plus
Query: 1 agagagcttccttca-cccactcatgga--ggagaactggggttgaattagctgccgcct 57
||||||||||||||| |||||||||||| |||||| ||||||||||||||||||| ||
Sbjct: 11 agagagcttccttcagcccactcatggataggagaaa-ggggttgaattagctgccgact 69
Query: 58 cattcatccaaccactcagtagaaa----ggaataggttttgt---gctactgtgattga 110
||||||| ||| ||| ||||||||| ||||| | | || | |||||||||||||
Sbjct: 70 cattcattcaagcac-cagtagaaaaaggggaatggatattcttttgctactgtgattgt 128
Query: 111 gtgaatgatgcgggagatagttttctat-tcctctctttccttgcttggactgaagggag 169
||||||||||||||||||| |||| || ||||| |||| ||||||||||||||||||
Sbjct: 129 gtgaatgatgcgggagataattttacatcccctctttttctgtgcttggactgaagggag 188
Query: 170 ctcct 174
|||||
Sbjct: 189 ctcct 193
>51351_ppl-miR319:pmrd
Length = 204
Score = 89.7 bits (45), Expect = 7e-19
Identities = 156/186 (83%), Gaps = 14/186 (7%)
Strand = Plus / Plus
Query: 1 agagagcttccttca-cccactcatgga--ggagaactggggttgaattagctgccgcct 57
||||||||||||||| |||||||||||| |||||| ||| ||||||||||||||| ||
Sbjct: 10 agagagcttccttcagcccactcatggataggagaaa-gggattgaattagctgccgact 68
Query: 58 cattcatccaaccactcagtagaaa-----ggaataggttttgt---gctactgtgattg 109
||||||| ||| |||| |||||||| ||||| | | || | |||||||||||||
Sbjct: 69 cattcattcaagcact-agtagaaaaaagtggaatggatattcttttgctactgtgattg 127
Query: 110 agtgaatgatgcgggagatagttttctat-tcctctctttccttgcttggactgaaggga 168
|||||||||||||||||||||||| || ||||| |||| |||||||||||||||||
Sbjct: 128 tgtgaatgatgcgggagatagttttacatcccctctttttctgtgcttggactgaaggga 187
Query: 169 gctcct 174
||||||
Sbjct: 188 gctcct 193
>51713_ptc-miR319g:pmrd
Length = 204
Score = 83.8 bits (42), Expect = 4e-17
Identities = 73/81 (90%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 96 tgctactgtgattgagtgaatgatgcgggagatagttttctattcctctc--tttccttg 153
|||||||||||||| ||||||||||||||||||| ||||| | ||||||| |||| ||
Sbjct: 116 tgctactgtgattgtgtgaatgatgcgggagataattttcca-tcctctccttttctgtg 174
Query: 154 cttggactgaagggagctcct 174
|||||||||||||||||||||
Sbjct: 175 cttggactgaagggagctcct 195
>54844_vvi-miR319c:pmrd
Length = 182
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 40 ttgaattagctgccgcctcattcatccaa 68
||||||||||||||| |||||||||||||
Sbjct: 49 ttgaattagctgccgactcattcatccaa 77
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tgcttggactgaagggagctcc 173
||||||||||||||||||||||
Sbjct: 148 tgcttggactgaagggagctcc 169
>51709_ptc-miR319c:pmrd
Length = 196
Score = 46.1 bits (23), Expect = 9e-06
Identities = 67/79 (84%), Gaps = 2/79 (2%)
Strand = Plus / Plus
Query: 96 tgctactgtgattgagtgaatgatgcgggagatagttttctattcctctctt-tccttgc 154
||||| ||||| || ||||||||||||||||||| |||| || | | |||| || |||
Sbjct: 109 tgctattgtgaatgtgtgaatgatgcgggagataaatttc-atccttttcttctctgtgc 167
Query: 155 ttggactgaagggagctcc 173
|||||||||||||||||||
Sbjct: 168 ttggactgaagggagctcc 186
>54846_vvi-miR319f:pmrd
Length = 193
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tgcttggactgaagggagctcc 173
||||||||||||||||||||||
Sbjct: 159 tgcttggactgaagggagctcc 180
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 98 ctactgtgattgagtgaatgatgcgggag 126
||||||||| || ||||||||||||||||
Sbjct: 105 ctactgtgaatgtgtgaatgatgcgggag 133
>54686_tae-miR319a:pmrd
Length = 196
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tgcttggactgaagggagctcc 173
||||||||||||||||||||||
Sbjct: 174 tgcttggactgaagggagctcc 195
>54380_pvu-miR319c:pmrd
Length = 734
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 153 gcttggactgaagggagctcct 174
||||||||||||||||||||||
Sbjct: 408 gcttggactgaagggagctcct 429
>51710_ptc-miR319d:pmrd
Length = 193
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tgcttggactgaagggagctcc 173
||||||||||||||||||||||
Sbjct: 162 tgcttggactgaagggagctcc 183
>51707_ptc-miR319a:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 43 aattagctgccgcctcattcatccaa 68
|||||||||||| |||||||||||||
Sbjct: 52 aattagctgccgactcattcatccaa 77
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 108 tgagtgaatgatgcgggaga 127
||||||||||||||||||||
Sbjct: 114 tgagtgaatgatgcgggaga 133
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggactgaagggagctcc 173
||||||||||||||||||||
Sbjct: 159 cttggactgaagggagctcc 178
>48573_gma-miR319b:pmrd
Length = 208
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 43 aattagctgccgcctcattcatccaa 68
|||||||||||| |||||||||||||
Sbjct: 63 aattagctgccgactcattcatccaa 88
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 108 tgagtgaatgatgcgggaga 127
||||||||||||||||||||
Sbjct: 124 tgagtgaatgatgcgggaga 143
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggactgaagggagctcc 173
||||||||||||||||||||
Sbjct: 169 cttggactgaagggagctcc 188
>48572_gma-miR319a:pmrd
Length = 207
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 43 aattagctgccgcctcattcatccaa 68
|||||||||||| |||||||||||||
Sbjct: 62 aattagctgccgactcattcatccaa 87
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 108 tgagtgaatgatgcgggaga 127
||||||||||||||||||||
Sbjct: 123 tgagtgaatgatgcgggaga 142
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggactgaagggagctcc 173
||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctcc 187
>46993_ath-miR319b:pmrd
Length = 172
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 152 tgcttggactgaagggagctcc 173
||||||||||||||||||||||
Sbjct: 149 tgcttggactgaagggagctcc 170
>52451_ptc-miRf10629-akr:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 152 tgcttggactgaagggagctc 172
|||||||||||||||||||||
Sbjct: 150 tgcttggactgaagggagctc 170
>51385_ppt-miR319b:pmrd
Length = 160
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 154 cttggactgaagggagctcct 174
|||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcct 160
>54845_vvi-miR319e:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 155 ttggactgaagggagctcct 174
||||||||||||||||||||
Sbjct: 77 ttggactgaagggagctcct 96
>54843_vvi-miR319b:pmrd
Length = 194
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggactgaagggagctcc 173
||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctcc 181
>54583_smo-miR319:pmrd
Length = 215
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggactgaagggagctcc 173
||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctcc 204
>52398_ptc-miRf10576-akr:pmrd
Length = 192
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 155 ttggactgaagggagctcct 174
||||||||||||||||||||
Sbjct: 164 ttggactgaagggagctcct 183
>51714_ptc-miR319h:pmrd
Length = 195
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 155 ttggactgaagggagctcct 174
||||||||||||||||||||
Sbjct: 165 ttggactgaagggagctcct 184
>51711_ptc-miR319e:pmrd
Length = 192
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 155 ttggactgaagggagctcct 174
||||||||||||||||||||
Sbjct: 164 ttggactgaagggagctcct 183
>51390_ppt-miR319e:pmrd
Length = 174
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggactgaagggagctcc 173
||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctcc 166
>51389_ppt-miR319d:pmrd
Length = 170
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggactgaagggagctcc 173
||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctcc 164
>51388_ppt-miR319d:pmrd
Length = 170
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggactgaagggagctcc 173
||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctcc 164
>51387_ppt-miR319d:pmrd
Length = 170
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggactgaagggagctcc 173
||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctcc 164
>51386_ppt-miR319c:pmrd
Length = 189
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggactgaagggagctcc 173
||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173
>51384_ppt-miR319a:pmrd
Length = 169
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggactgaagggagctcc 173
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
>48687_ltu-miR319:pmrd
Length = 167
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggactgaagggagctcc 173
||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctcc 166
>46994_ath-miR319c:pmrd
Length = 199
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 111 gtgaatgatgcgggagatagtttt 134
||||||||||||||||||| ||||
Sbjct: 127 gtgaatgatgcgggagatattttt 150
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 155 ttggactgaagggagctcct 174
||||||||||||||||||||
Sbjct: 170 ttggactgaagggagctcct 189
>46884_aqc-miR319:pmrd
Length = 177
Score = 40.1 bits (20), Expect = 5e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 154 cttggactgaagggagctcc 173
||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctcc 173
