miRNEST 2.0, an integrative microRNA resource :: BLAST
>51347_ppe-miR408:pmrd
Length = 105
Score = 121 bits (61), Expect = 9e-29
Identities = 82/89 (92%)
Strand = Plus / Plus
Query: 1 agacagggacgaggtagagcatggatggagttcccaacagaacagtcaagctgttgtggc 60
||||||||| ||||||||||||||||||||||||||||||| | | ||||||||||||
Sbjct: 8 agacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggc 67
Query: 61 tccactcatgcactgcctcttccctggct 89
|| ||||||||||||||||||||||||||
Sbjct: 68 tctactcatgcactgcctcttccctggct 96
>54892_vvi-miR408:pmrd
Length = 107
Score = 56.0 bits (28), Expect = 4e-09
Identities = 76/91 (83%), Gaps = 2/91 (2%)
Strand = Plus / Plus
Query: 1 agacagggacgaggtagagcatggatggagttcccaacagaaca--gtcaagctgttgtg 58
|||| |||||||||||| ||||||||||| | ||||||| | || |||||||| |
Sbjct: 8 agacggggacgaggtagtgcatggatggaactattaacagaagaatgttaagctgttttt 67
Query: 59 gctccactcatgcactgcctcttccctggct 89
|||| || |||||||||||||||||||||||
Sbjct: 68 gctctacccatgcactgcctcttccctggct 98
>48428_cpt-miR408:pmrd
Length = 100
Score = 54.0 bits (27), Expect = 2e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 51 ctgttgtggctccactcatgcactgcctcttccctggct 89
||||| ||||||| | |||||||||||||||||||||||
Sbjct: 53 ctgttttggctcctcccatgcactgcctcttccctggct 91
>51762_ptc-miR408:pmrd
Length = 105
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 52 tgttgtggctccactcatgcactgcctcttccctggct 89
|||| |||||| || |||||||||||||||||||||||
Sbjct: 60 tgttttggctctacccatgcactgcctcttccctggct 97
>48584_gma-miR408a:pmrd
Length = 120
Score = 52.0 bits (26), Expect = 7e-08
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 51 ctgttgtggctccactcatgcactgcctcttccctggc 88
||||||||||| | |||||||||||||| |||||||||
Sbjct: 83 ctgttgtggctacgctcatgcactgcctgttccctggc 120
>51397_ppt-miR408b:pmrd
Length = 144
Score = 50.1 bits (25), Expect = 3e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 65 ctcatgcactgcctcttccctggct 89
|||||||||||||||||||||||||
Sbjct: 90 ctcatgcactgcctcttccctggct 114
>54389_rco-miR408:pmrd
Length = 129
Score = 46.1 bits (23), Expect = 4e-06
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 51 ctgttgtggctccactcatgcactgcctcttccctggct 89
||||| |||||| || | |||||||||||||||||||||
Sbjct: 73 ctgttttggctctacccctgcactgcctcttccctggct 111
>53677_ptc-miRf11855-akr:pmrd
Length = 79
Score = 46.1 bits (23), Expect = 4e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 52 tgttgtggctccactcatgcactgcctcttccctg 86
|||| |||||| || ||||||||||||||||||||
Sbjct: 45 tgttttggctctacccatgcactgcctcttccctg 79
>48142_ath-miRf11042-akr:pmrd
Length = 99
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 67 catgcactgcctcttccctggct 89
|||||||||||||||||||||||
Sbjct: 27 catgcactgcctcttccctggct 5
>47031_ath-miR408:pmrd
Length = 218
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 67 catgcactgcctcttccctggct 89
|||||||||||||||||||||||
Sbjct: 119 catgcactgcctcttccctggct 141
>46892_aqc-miR408:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 67 catgcactgcctcttccctggct 89
|||||||||||||||||||||||
Sbjct: 23 catgcactgcctcttccctggct 1
>54585_smo-miR408:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 atgcactgcctcttccctggct 89
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>51566_pta-miR408:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 68 atgcactgcctcttccctggct 89
||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggct 85
>55104_zma-miR408:pmrd
Length = 191
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggct 173
>54690_tae-miR408:pmrd
Length = 187
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggct 157
>54649_sof-miR408d:pmrd
Length = 215
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggct 197
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 agacagggacgaggtagagcatgg 24
|||||||||||||| |||||||||
Sbjct: 20 agacagggacgaggcagagcatgg 43
>54648_sof-miR408c:pmrd
Length = 286
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>54647_sof-miR408b:pmrd
Length = 286
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>54646_sof-miR408a:pmrd
Length = 283
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggct 265
>54499_sbi-miR408:pmrd
Length = 205
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>48975_osa-miR408:pmrd
Length = 213
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 69 tgcactgcctcttccctggct 89
|||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggct 174
>48317_bdi-miR408:pmrd
Length = 133
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 67 catgcactgcctcttccctgg 87
|||||||||||||||||||||
Sbjct: 68 catgcactgcctcttccctgg 88
