miRNEST 2.0, an integrative microRNA resource :: BLAST
>54836_vvi-miR171i:pmrd
Length = 103
Score = 91.7 bits (46), Expect = 6e-20
Identities = 70/77 (90%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 gatgttggaacggctcaatcaaatcaaatctcccaa--gaattgggtcctttagtttgat 58
|||||||||| ||||||||||||||||||||||||| | |||||||||||| | ||||
Sbjct: 13 gatgttggaatggctcaatcaaatcaaatctcccaagggttttgggtcctttaatctgat 72
Query: 59 tgagccgtgccaatatc 75
|||||||||||||||||
Sbjct: 73 tgagccgtgccaatatc 89
>46877_aqc-miR171b:pmrd
Length = 77
Score = 81.8 bits (41), Expect = 6e-17
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 3 tgttggaacggctcaatcaaatcaaatctcccaagaattgggtcctttagtttgattgag 62
|||||||| ||||||||||||| ||| ||| ||| ||||||||||||| | ||||||||
Sbjct: 3 tgttggaatggctcaatcaaatgaaagctctcaaagattgggtcctttaatctgattgag 62
Query: 63 ccgtgccaatatc 75
|||||||||||||
Sbjct: 63 ccgtgccaatatc 75
>51346_ppe-miR171:pmrd
Length = 97
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 39 attgggtcctttagtttgattgagccgtgccaatatc 75
||||||||||||| |||||||||||||||||||||||
Sbjct: 51 attgggtcctttaatttgattgagccgtgccaatatc 87
>51345_ppe-miR170:pmrd
Length = 97
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 39 attgggtcctttagtttgattgagccgtgccaatatc 75
||||||||||||| |||||||||||||||||||||||
Sbjct: 51 attgggtcctttaatttgattgagccgtgccaatatc 87
>54828_vvi-miR171a:pmrd
Length = 99
Score = 61.9 bits (31), Expect = 6e-11
Identities = 64/75 (85%)
Strand = Plus / Plus
Query: 1 gatgttggaacggctcaatcaaatcaaatctcccaagaattgggtcctttagtttgattg 60
|||||||| |||||||||||||| |||| || ||| ||| |||||||| | ||||||
Sbjct: 14 gatgttgggacggctcaatcaaaccaaagatctcaatggttgagtcctttaatctgattg 73
Query: 61 agccgtgccaatatc 75
|||||||||||||||
Sbjct: 74 agccgtgccaatatc 88
>51691_ptc-miR171h:pmrd
Length = 100
Score = 50.1 bits (25), Expect = 2e-07
Identities = 68/81 (83%), Gaps = 6/81 (7%)
Strand = Plus / Plus
Query: 1 gatgttggaacggctcaatcaaatcaaatctcccaa-----ga-attgggtcctttagtt 54
|||||||| | |||||||||| |||||||||||||| || ||||||| |||| |
Sbjct: 11 gatgttgggatggctcaatcatatcaaatctcccaaactatgatgttgggtcgtttaatc 70
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 71 tgattgagccgtgccaatatc 91
>54831_vvi-miR171d:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 64 gtttgattgagccgtgccaatatc 87
>54551_sly-miR171a:pmrd
Length = 122
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 84 gtttgattgagccgtgccaatatc 107
>54452_sbi-miR171a:pmrd
Length = 161
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 119 gtttgattgagccgtgccaatatc 142
>51882_ptc-miRf10060-akr:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 60 gtttgattgagccgtgccaatatc 83
>51690_ptc-miR171g:pmrd
Length = 100
Score = 48.1 bits (24), Expect = 9e-07
Identities = 33/36 (91%)
Strand = Plus / Plus
Query: 40 ttgggtcctttagtttgattgagccgtgccaatatc 75
||||||| |||| | |||||||||||||||||||||
Sbjct: 56 ttgggtcttttaatctgattgagccgtgccaatatc 91
>51685_ptc-miR171b:pmrd
Length = 103
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 68 gtttgattgagccgtgccaatatc 91
>51684_ptc-miR171a:pmrd
Length = 104
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 69 gtttgattgagccgtgccaatatc 92
>48723_mtr-miR171g:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>48722_mtr-miR171d:pmrd
Length = 105
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>48403_bra-miR171a:pmrd
Length = 85
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 59 gtttgattgagccgtgccaatatc 82
>48386_bol-miR171a:pmrd
Length = 96
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 65 gtttgattgagccgtgccaatatc 88
>48367_bna-miR171e:pmrd
Length = 92
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 64 gtttgattgagccgtgccaatatc 87
>48366_bna-miR171d:pmrd
Length = 96
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 65 gtttgattgagccgtgccaatatc 88
>46880_aqc-miR171e:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 24 gtttgattgagccgtgccaatatc 1
>46876_aqc-miR171a:pmrd
Length = 102
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 52 gtttgattgagccgtgccaatatc 75
||||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatatc 100
>55029_zma-miR171b:pmrd
Length = 85
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatc 82
>54830_vvi-miR171c:pmrd
Length = 103
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatc 90
>54462_sbi-miR171k:pmrd
Length = 87
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatatc 82
>52725_ptc-miRf10903-akr:pmrd
Length = 85
Score = 46.1 bits (23), Expect = 3e-06
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 13 gctcaatcaaatcaaatctcccaagaattgggtcctttagtttgattgagccgtgccaat 72
|||||||||||||||| | | ||| |||||| |||| | ||||||||||||||||||
Sbjct: 18 gctcaatcaaatcaaagcactcaatggttgggttctttcatctgattgagccgtgccaat 77
Query: 73 atc 75
|||
Sbjct: 78 atc 80
>51692_ptc-miR171i:pmrd
Length = 129
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatatc 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 5 ttggaacggctcaatcaaatcaaa 28
|||| |||||||||||||||||||
Sbjct: 116 ttggcacggctcaatcaaatcaaa 93
>51688_ptc-miR171e:pmrd
Length = 94
Score = 46.1 bits (23), Expect = 3e-06
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 13 gctcaatcaaatcaaatctcccaagaattgggtcctttagtttgattgagccgtgccaat 72
|||||||||||||||| | | ||| |||||| |||| | ||||||||||||||||||
Sbjct: 23 gctcaatcaaatcaaagcactcaatggttgggttctttcatctgattgagccgtgccaat 82
Query: 73 atc 75
|||
Sbjct: 83 atc 85
>48897_osa-miR171c:pmrd
Length = 99
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatatc 89
>48896_osa-miR171b:pmrd
Length = 100
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatatc 90
>48312_bdi-miR171c:pmrd
Length = 86
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatatc 84
>46979_ath-miR171c:pmrd
Length = 116
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatatc 107
>46879_aqc-miR171d:pmrd
Length = 106
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 53 tttgattgagccgtgccaatatc 75
|||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatatc 104
>55039_zma-miR171m:pmrd
Length = 113
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 ttgattgagccgtgccaatatc 75
||||||||||||||||||||||
Sbjct: 92 ttgattgagccgtgccaatatc 113
>55036_zma-miR171i:pmrd
Length = 104
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 ttgattgagccgtgccaatatc 75
||||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatatc 85
>55033_zma-miR171f:pmrd
Length = 155
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 ttgattgagccgtgccaatatc 75
||||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatatc 135
>55024_zma-miR170m:pmrd
Length = 115
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 54 ttgattgagccgtgccaatatc 75
||||||||||||||||||||||
Sbjct: 94 ttgattgagccgtgccaatatc 115
>55037_zma-miR171j:pmrd
Length = 129
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatatc 110
>55032_zma-miR171e:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>55031_zma-miR171d:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 82 tgattgagccgtgccaatatc 102
>54680_tae-miR170b:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 74 tgattgagccgtgccaatatc 94
>54460_sbi-miR171i:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatatc 88
>54455_sbi-miR171d:pmrd
Length = 154
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 115 tgattgagccgtgccaatatc 135
>54453_sbi-miR171b:pmrd
Length = 132
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatatc 113
>51689_ptc-miR171f:pmrd
Length = 130
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 101 tgattgagccgtgccaatatc 121
>49676_osa-miRf10461-akr:pmrd
Length = 123
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 95 tgattgagccgtgccaatatc 115
>48905_osa-miR171n:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 79 tgattgagccgtgccaatatc 99
>48904_osa-miR171m:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>48900_osa-miR171f:pmrd
Length = 127
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatatc 117
>48899_osa-miR171e:pmrd
Length = 119
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatatc 109
>48898_osa-miR171d:pmrd
Length = 135
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatatc 125
>48894_osa-miR170b:pmrd
Length = 107
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatatc 107
>48893_osa-miR170a:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 79 tgattgagccgtgccaatatc 99
>48663_hvv-miR171:pmrd
Length = 78
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 58 tgattgagccgtgccaatatc 78
>48662_hvv-miR170:pmrd
Length = 78
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 55 tgattgagccgtgccaatatc 75
|||||||||||||||||||||
Sbjct: 58 tgattgagccgtgccaatatc 78
