miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45197_miR162:micropc
Length = 139
Score = 129 bits (65), Expect = 6e-31
Identities = 65/65 (100%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttccctaggcctgatgatgaatgagttatagaatct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttccctaggcctgatgatgaatgagttatagaatct 60
Query: 61 taagg 65
|||||
Sbjct: 61 taagg 65
>44890_miR162:micropc
Length = 141
Score = 87.7 bits (44), Expect = 2e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttccctaggcctgatgatgaatga 48
||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2 tggatgcagcggttcatcgatctgttccctaagcctgatgatgaatga 49
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 106 gcaaaaggaatcggtcgataaacctctgcatcca 139
||||||||||||||||||||||||||||||||||
Sbjct: 107 gcaaaaggaatcggtcgataaacctctgcatcca 140
>44807_miR162:micropc
Length = 141
Score = 87.7 bits (44), Expect = 2e-18
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttccctaggcctgatgatgaatga 48
||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 2 tggatgcagcggttcatcgatctgttccctaagcctgatgatgaatga 49
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 106 gcaaaaggaatcggtcgataaacctctgcatcca 139
||||||||||||||||||||||||||||||||||
Sbjct: 107 gcaaaaggaatcggtcgataaacctctgcatcca 140
>46628_miR162:micropc
Length = 136
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttccctaggcctgatga 41
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2 tggatgcagcggttcatcgatctgttccctaagcctgatga 42
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 110 aaggaatcggtcgataaacctctgcatcca 139
||||||||||||||||||||||||||||||
Sbjct: 106 aaggaatcggtcgataaacctctgcatcca 135
>46470_miR162:micropc
Length = 135
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttccctaggcctgatga 41
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttccctaagcctgatga 41
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 106 gcaaaaggaatcggtcgataaacctctgcatcca 139
||||||||||||||||||||||||||||||||||
Sbjct: 102 gcaaaaggaatcggtcgataaacctctgcatcca 135
>46169_miR162:micropc
Length = 136
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttccctaggcctgatga 41
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2 tggatgcagcggttcatcgatctgttccctaagcctgatga 42
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 110 aaggaatcggtcgataaacctctgcatcca 139
||||||||||||||||||||||||||||||
Sbjct: 106 aaggaatcggtcgataaacctctgcatcca 135
>45868_miR162:micropc
Length = 135
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttccctaggcctgatga 41
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttccctaagcctgatga 41
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 106 gcaaaaggaatcggtcgataaacctctgcatcca 139
||||||||||||||||||||||||||||||||||
Sbjct: 102 gcaaaaggaatcggtcgataaacctctgcatcca 135
>45605_miR162:micropc
Length = 135
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttccctaggcctgatga 41
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttccctaagcctgatga 41
Score = 67.9 bits (34), Expect = 2e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 106 gcaaaaggaatcggtcgataaacctctgcatcca 139
||||||||||||||||||||||||||||||||||
Sbjct: 102 gcaaaaggaatcggtcgataaacctctgcatcca 135
>45084_miR162:micropc
Length = 136
Score = 73.8 bits (37), Expect = 3e-14
Identities = 40/41 (97%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttccctaggcctgatga 41
||||||||||||||||||||||||||||||| |||||||||
Sbjct: 2 tggatgcagcggttcatcgatctgttccctaagcctgatga 42
Score = 60.0 bits (30), Expect = 5e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 110 aaggaatcggtcgataaacctctgcatcca 139
||||||||||||||||||||||||||||||
Sbjct: 106 aaggaatcggtcgataaacctctgcatcca 135
>46557_miR162:micropc
Length = 85
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
||||||||||||||||||||||||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||||||||||||||||||||||||
Sbjct: 59 gaatcggtcgataaacctctgcatcca 85
>46457_miR162:micropc
Length = 109
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 108 aaaaggaatcggtcgataaacctctgcatcca 139
||||||||||| ||||||||||||||||||||
Sbjct: 78 aaaaggaatcgatcgataaacctctgcatcca 109
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
||||| ||||||||||||||||||||||
Sbjct: 1 tggattcagcggttcatcgatctgttcc 28
>46026_miR162:micropc
Length = 87
Score = 56.0 bits (28), Expect = 7e-09
Identities = 28/28 (100%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
||||||||||||||||||||||||||||
Sbjct: 2 tggatgcagcggttcatcgatctgttcc 29
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||||||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatcca 86
>45901_miR162:micropc
Length = 111
Score = 56.0 bits (28), Expect = 7e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 108 aaaaggaatcggtcgataaacctctgcatcca 139
||||||||||| ||||||||||||||||||||
Sbjct: 79 aaaaggaatcgatcgataaacctctgcatcca 110
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
||||| ||||||||||||||||||||||
Sbjct: 2 tggattcagcggttcatcgatctgttcc 29
>46792_miR162:micropc
Length = 83
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||||||||||||||||||||||||
Sbjct: 57 gaatcggtcgataaacctctgcatcca 83
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
||||||||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctcttcc 28
>46096_miR162:micropc
Length = 87
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||||||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatcca 86
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 2 tggaggcagcggttcatcgatctcttcc 29
>45757_miR162:micropc
Length = 86
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||||||||||||||||||||||||
Sbjct: 60 gaatcggtcgataaacctctgcatcca 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgtt 26
|||| |||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctgtt 26
>45617_miR162:micropc
Length = 88
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||||||||||||||||||||||||
Sbjct: 61 gaatcggtcgataaacctctgcatcca 87
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgtt 26
|||| |||||||||||||||||||||
Sbjct: 2 tggaggcagcggttcatcgatctgtt 27
>44984_miR162:micropc
Length = 85
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||||||||||||||||||||||||
Sbjct: 58 gaatcggtcgataaacctctgcatcca 84
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
||||||||||||||||||||||| ||||
Sbjct: 2 tggatgcagcggttcatcgatctcttcc 29
>44920_miR162:micropc
Length = 85
Score = 54.0 bits (27), Expect = 3e-08
Identities = 27/27 (100%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||||||||||||||||||||||||
Sbjct: 59 gaatcggtcgataaacctctgcatcca 85
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcc 28
>46090_miR162:micropc
Length = 97
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 111 aggaatcggtcgataaacctctgcatcca 139
|||||||| ||||||||||||||||||||
Sbjct: 69 aggaatcgatcgataaacctctgcatcca 97
>45749_miR162:micropc
Length = 99
Score = 50.1 bits (25), Expect = 4e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 111 aggaatcggtcgataaacctctgcatcca 139
|||||||| ||||||||||||||||||||
Sbjct: 70 aggaatcgatcgataaacctctgcatcca 98
>45991_miR162:micropc
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
||||| ||||||||||||||||||||||
Sbjct: 2 tggattcagcggttcatcgatctgttcc 29
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 112 ggaatcggtcgataaacctctgcatcca 139
||||||| ||||||||||||||||||||
Sbjct: 80 ggaatcgatcgataaacctctgcatcca 107
>44845_miR162:micropc
Length = 106
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
||||| ||||||||||||||||||||||
Sbjct: 1 tggattcagcggttcatcgatctgttcc 28
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 112 ggaatcggtcgataaacctctgcatcca 139
||||||| ||||||||||||||||||||
Sbjct: 79 ggaatcgatcgataaacctctgcatcca 106
>46817_miR162:micropc
Length = 93
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||| ||||||||||||||||||||
Sbjct: 66 gaatcgatcgataaacctctgcatcca 92
>46676_miR162:micropc
Length = 97
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||| ||||||||||||||||||||
Sbjct: 70 gaatcgatcgataaacctctgcatcca 96
>46597_miR162:micropc
Length = 91
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||| ||||||||||||||||||||
Sbjct: 65 gaatcgatcgataaacctctgcatcca 91
>46549_miR162:micropc
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||| ||||||||||||||||||||
Sbjct: 65 gaatcgatcgataaacctctgcatcca 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 2 tggaggcagcggttcatcgatctcttcc 29
>46511_miR162:micropc
Length = 89
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||| ||||||||||||||||||||
Sbjct: 63 gaatcgatcgataaacctctgcatcca 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcc 28
>46504_miR162:micropc
Length = 90
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||| ||||||||||||||||||||
Sbjct: 64 gaatcgatcgataaacctctgcatcca 90
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcc 28
>46394_miR162:micropc
Length = 95
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||| ||||||||||||||||||||
Sbjct: 69 gaatcgatcgataaacctctgcatcca 95
>46364_miR162:micropc
Length = 95
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||| ||||||||||||||||||||
Sbjct: 69 gaatcgatcgataaacctctgcatcca 95
>46039_miR162:micropc
Length = 92
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||| ||||||||||||||||||||
Sbjct: 65 gaatcgatcgataaacctctgcatcca 91
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 2 tggaggcagcggttcatcgatctcttcc 29
>45903_miR162:micropc
Length = 90
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||| ||||||||||||||||||||
Sbjct: 64 gaatcgatcgataaacctctgcatcca 90
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcc 28
>45545_miR162:micropc
Length = 91
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||| ||||||||||||||||||||
Sbjct: 64 gaatcgatcgataaacctctgcatcca 90
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 2 tggaggcagcggttcatcgatctcttcc 29
>44934_miR162:micropc
Length = 97
Score = 46.1 bits (23), Expect = 7e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 113 gaatcggtcgataaacctctgcatcca 139
|||||| ||||||||||||||||||||
Sbjct: 70 gaatcgatcgataaacctctgcatcca 96
>45338_miR162:micropc
Length = 112
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 111 aggaatcggtcgataaacctctgcatcca 139
|||||||| ||||||| ||||||||||||
Sbjct: 84 aggaatcgatcgataagcctctgcatcca 112
>45279_miR162:micropc
Length = 114
Score = 42.1 bits (21), Expect = 1e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 111 aggaatcggtcgataaacctctgcatcca 139
|||||||| ||||||| ||||||||||||
Sbjct: 85 aggaatcgatcgataagcctctgcatcca 113
>46456_miR162:micropc
Length = 89
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 tcgataaacctctgcatcca 139
||||||||||||||||||||
Sbjct: 69 tcgataaacctctgcatcca 88
>45921_miR162:micropc
Length = 110
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 2 tggaggcagcggttcatcgatctcttcc 29
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 tcgataaacctctgcatcca 139
||||||||||||||||||||
Sbjct: 90 tcgataaacctctgcatcca 109
>45508_miR162:micropc
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggatgcagcggttcatcgatctgttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcc 28
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 tcgataaacctctgcatcca 139
||||||||||||||||||||
Sbjct: 89 tcgataaacctctgcatcca 108
>45283_miR162:micropc
Length = 87
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 120 tcgataaacctctgcatcca 139
||||||||||||||||||||
Sbjct: 68 tcgataaacctctgcatcca 87
