miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45921_miR162:micropc
Length = 110
Score = 89.7 bits (45), Expect = 4e-19
Identities = 45/45 (100%)
Strand = Plus / Plus
Query: 64 gaaagagattaaaagcacgaacagatcgataaacctctgcatcca 108
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 65 gaaagagattaaaagcacgaacagatcgataaacctctgcatcca 109
Score = 67.9 bits (34), Expect = 1e-12
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgtgga 34
||||||||||||||||||||||||||||||||||
Sbjct: 2 tggaggcagcggttcatcgatctcttcctgtgga 35
>46549_miR162:micropc
Length = 92
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 2 tggaggcagcggttcatcgatctcttcctg 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 70 gatcgataaacctctgcatcca 91
>46511_miR162:micropc
Length = 89
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg 30
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 68 gatcgataaacctctgcatcca 89
>46504_miR162:micropc
Length = 90
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg 30
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 69 gatcgataaacctctgcatcca 90
>46096_miR162:micropc
Length = 87
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 2 tggaggcagcggttcatcgatctcttcctg 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 67 tcgataaacctctgcatcca 86
>46039_miR162:micropc
Length = 92
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 2 tggaggcagcggttcatcgatctcttcctg 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 70 gatcgataaacctctgcatcca 91
>45903_miR162:micropc
Length = 90
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg 30
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 69 gatcgataaacctctgcatcca 90
>45545_miR162:micropc
Length = 91
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 2 tggaggcagcggttcatcgatctcttcctg 31
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 69 gatcgataaacctctgcatcca 90
>44920_miR162:micropc
Length = 85
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatctcttcctg 30
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 66 tcgataaacctctgcatcca 85
>46456_miR162:micropc
Length = 89
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 ggaggcagcggttcatcgatctcttcctg 30
|||||||||||||||||||||||||||||
Sbjct: 4 ggaggcagcggttcatcgatctcttcctg 32
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 gaacagatcgataaacctctgcatcca 108
|||| ||||||||||||||||||||||
Sbjct: 62 gaaccgatcgataaacctctgcatcca 88
>45283_miR162:micropc
Length = 87
Score = 58.0 bits (29), Expect = 1e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 2 ggaggcagcggttcatcgatctcttcctg 30
|||||||||||||||||||||||||||||
Sbjct: 3 ggaggcagcggttcatcgatctcttcctg 31
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 gaacagatcgataaacctctgcatcca 108
|||| ||||||||||||||||||||||
Sbjct: 61 gaaccgatcgataaacctctgcatcca 87
>46792_miR162:micropc
Length = 83
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
|||| |||||||||||||||||||||||||
Sbjct: 1 tggatgcagcggttcatcgatctcttcctg 30
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 64 tcgataaacctctgcatcca 83
>44984_miR162:micropc
Length = 85
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
|||| |||||||||||||||||||||||||
Sbjct: 2 tggatgcagcggttcatcgatctcttcctg 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 65 tcgataaacctctgcatcca 84
>46676_miR162:micropc
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgtg 32
|||||||||||||||||||||| ||||||||
Sbjct: 2 tggaggcagcggttcatcgatcaattcctgtg 33
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 75 gatcgataaacctctgcatcca 96
>46394_miR162:micropc
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgtg 32
|||||||||||||||||||||| ||||||||
Sbjct: 1 tggaggcagcggttcatcgatcaattcctgtg 32
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 74 gatcgataaacctctgcatcca 95
>46364_miR162:micropc
Length = 95
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgtg 32
|||||||||||||||||||||| ||||||||
Sbjct: 1 tggaggcagcggttcatcgatcaattcctgtg 32
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 74 gatcgataaacctctgcatcca 95
>44934_miR162:micropc
Length = 97
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgtg 32
|||||||||||||||||||||| ||||||||
Sbjct: 2 tggaggcagcggttcatcgatcaattcctgtg 33
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 75 gatcgataaacctctgcatcca 96
>45757_miR162:micropc
Length = 86
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatct 23
|||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatct 23
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 67 tcgataaacctctgcatcca 86
>45617_miR162:micropc
Length = 88
Score = 46.1 bits (23), Expect = 5e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatct 23
|||||||||||||||||||||||
Sbjct: 2 tggaggcagcggttcatcgatct 24
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 68 tcgataaacctctgcatcca 87
>46817_miR162:micropc
Length = 93
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 2 tggaggcagcggttcatcgatc 23
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 71 gatcgataaacctctgcatcca 92
>46597_miR162:micropc
Length = 91
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 1 tggaggcagcggttcatcgatc 22
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 70 gatcgataaacctctgcatcca 91
>46557_miR162:micropc
Length = 85
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
|||| |||||||||||||||||| ||||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcctg 30
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 66 tcgataaacctctgcatcca 85
>46457_miR162:micropc
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 88 gatcgataaacctctgcatcca 109
>46090_miR162:micropc
Length = 97
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 76 gatcgataaacctctgcatcca 97
>46026_miR162:micropc
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
|||| |||||||||||||||||| ||||||
Sbjct: 2 tggatgcagcggttcatcgatctgttcctg 31
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 67 tcgataaacctctgcatcca 86
>45991_miR162:micropc
Length = 108
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 86 gatcgataaacctctgcatcca 107
>45901_miR162:micropc
Length = 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 89 gatcgataaacctctgcatcca 110
>45749_miR162:micropc
Length = 99
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 77 gatcgataaacctctgcatcca 98
>44845_miR162:micropc
Length = 106
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 85 gatcgataaacctctgcatcca 106
>46628_miR162:micropc
Length = 136
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 2 tggatgcagcggttcatcgatctgttcc 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135
>46470_miR162:micropc
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135
>46169_miR162:micropc
Length = 136
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 2 tggatgcagcggttcatcgatctgttcc 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135
>45868_miR162:micropc
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135
>45605_miR162:micropc
Length = 135
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135
>45416_miR162:micropc
Length = 139
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 120 tcgataaacctctgcatcca 139
>45197_miR162:micropc
Length = 139
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 1 tggatgcagcggttcatcgatctgttcc 28
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 120 tcgataaacctctgcatcca 139
>45084_miR162:micropc
Length = 136
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 2 tggatgcagcggttcatcgatctgttcc 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 116 tcgataaacctctgcatcca 135
>44890_miR162:micropc
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 2 tggatgcagcggttcatcgatctgttcc 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 121 tcgataaacctctgcatcca 140
>44807_miR162:micropc
Length = 141
Score = 40.1 bits (20), Expect = 3e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcc 28
|||| |||||||||||||||||| ||||
Sbjct: 2 tggatgcagcggttcatcgatctgttcc 29
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 121 tcgataaacctctgcatcca 140
