miRNEST 2.0, an integrative microRNA resource :: BLAST
>40024_ath-MIR162a:mirbase
Length = 140
Score = 63.9 bits (32), Expect = 2e-11
Identities = 32/32 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgtg 32
||||||||||||||||||||||||||||||||
Sbjct: 26 tggaggcagcggttcatcgatctcttcctgtg 57
Score = 56.0 bits (28), Expect = 5e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 73 taaaagcacgaacagatcgataaacctctgcatcca 108
|||||||| ||| |||||||||||||||||||||||
Sbjct: 73 taaaagcatgaatagatcgataaacctctgcatcca 108
>41313_ptc-MIR162a:mirbase
Length = 107
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 12 tggaggcagcggttcatcgatctcttcctg 41
Score = 46.1 bits (23), Expect = 5e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 82 gaacagatcgataaacctctgcatcca 108
|||| ||||||||||||||||||||||
Sbjct: 71 gaaccgatcgataaacctctgcatcca 97
>41090_tcc-MIR162:mirbase
Length = 131
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 22 tggaggcagcggttcatcgatctcttcctg 51
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 89 gatcgataaacctctgcatcca 110
>41046_ghr-MIR162a:mirbase
Length = 148
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 25 tggaggcagcggttcatcgatctcttcctg 54
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 92 gatcgataaacctctgcatcca 113
>40342_rco-MIR162:mirbase
Length = 101
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 5 tggaggcagcggttcatcgatctcttcctg 34
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 74 gatcgataaacctctgcatcca 95
>40329_cpa-MIR162a:mirbase
Length = 109
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 14 tggaggcagcggttcatcgatctcttcctg 43
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 78 gatcgataaacctctgcatcca 99
>39812_aly-MIR162a:mirbase
Length = 228
Score = 60.0 bits (30), Expect = 3e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||||||||||
Sbjct: 69 tggaggcagcggttcatcgatctcttcctg 98
Score = 54.0 bits (27), Expect = 2e-08
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 74 aaaagcacgaacagatcgataaacctctgcatcca 108
||||||| ||| |||||||||||||||||||||||
Sbjct: 121 aaaagcatgaatagatcgataaacctctgcatcca 155
>41578_vvi-MIR162:mirbase
Length = 103
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
|||| |||||||||||||||||||||||||
Sbjct: 10 tggatgcagcggttcatcgatctcttcctg 39
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 73 tcgataaacctctgcatcca 92
>41315_ptc-MIR162c:mirbase
Length = 107
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||| ||||||
Sbjct: 12 tggaggcagcggttcatcgatcttttcctg 41
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 79 cacgaacagatcgataaacctctgcatcca 108
||||||| ||||||||||||||||||||||
Sbjct: 68 cacgaaccgatcgataaacctctgcatcca 97
>41314_ptc-MIR162b:mirbase
Length = 107
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
||||||||||||||||||||||| ||||||
Sbjct: 12 tggaggcagcggttcatcgatcttttcctg 41
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 79 cacgaacagatcgataaacctctgcatcca 108
||||||| ||||||||||||||||||||||
Sbjct: 68 cacgaaccgatcgataaacctctgcatcca 97
>40437_gma-MIR162:mirbase
Length = 102
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
|||| |||||||||||||||||||||||||
Sbjct: 11 tggatgcagcggttcatcgatctcttcctg 40
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 71 gatcgataaacctctgcatcca 92
>40025_ath-MIR162b:mirbase
Length = 111
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgtg 32
|||||||||||||||||||||| ||||||||
Sbjct: 13 tggaggcagcggttcatcgatcaattcctgtg 44
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 74 aaaagcacgaacagatcgataaacctctgcatcca 108
||||||| ||| ||||||||||||||||||||||
Sbjct: 64 aaaagcaagaatcgatcgataaacctctgcatcca 98
>39813_aly-MIR162b:mirbase
Length = 184
Score = 48.1 bits (24), Expect = 1e-06
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctgtg 32
|||||||||||||||||||||| ||||||||
Sbjct: 51 tggaggcagcggttcatcgatcaattcctgtg 82
Score = 46.1 bits (23), Expect = 5e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 74 aaaagcacgaacagatcgataaacctctgcatcca 108
||||||| ||| ||||||||||||||||||||||
Sbjct: 98 aaaagcatgaatcgatcgataaacctctgcatcca 132
>42502_sbi-MIR162:mirbase
Length = 127
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 105 gatcgataaacctctgcatcca 126
>41929_osa-MIR162a:mirbase
Length = 171
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 141 gatcgataaacctctgcatcca 162
>41220_csi-MIR162:mirbase
Length = 201
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatc 22
||||||||||||||||||||||
Sbjct: 90 tggaggcagcggttcatcgatc 111
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcca 108
||||||||||||||||||||||
Sbjct: 159 gatcgataaacctctgcatcca 180
>40663_mtr-MIR162:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 1 tggaggcagcggttcatcgatctcttcctg 30
|||| |||||||||||||||||| ||||||
Sbjct: 22 tggatgcagcggttcatcgatctgttcctg 51
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 87 tcgataaacctctgcatcca 106
>41736_bdi-MIR162:mirbase
Length = 133
Score = 42.1 bits (21), Expect = 8e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 87 gatcgataaacctctgcatcc 107
|||||||||||||||||||||
Sbjct: 109 gatcgataaacctctgcatcc 129
>42708_zma-MIR162:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 110 tcgataaacctctgcatcca 129
>41530_sly-MIR162:mirbase
Length = 99
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 89 tcgataaacctctgcatcca 108
||||||||||||||||||||
Sbjct: 79 tcgataaacctctgcatcca 98
