miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>54449_sbi-miR169m:pmrd
Length = 92
Score = 172 bits (87), Expect = 3e-44
Identities = 87/87 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatatcctctctaaaggatcagcaaatattgaggcttctagt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 agccaaggatgacttgcctatatcctctctaaaggatcagcaaatattgaggcttctagt 61
Query: 61 ggtctcatatgggcagtctccttggct 87
|||||||||||||||||||||||||||
Sbjct: 62 ggtctcatatgggcagtctccttggct 88
>54450_sbi-miR169n:pmrd
Length = 93
Score = 111 bits (56), Expect = 8e-26
Identities = 80/87 (91%), Gaps = 2/87 (2%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatatcctctctaaaggatcagcaaatattgaggcttctagt 60
|||||||||||||||||||||||||||| | |||||||||||||||| ||||||| |||
Sbjct: 4 agccaaggatgacttgcctatatcctctatgaaggatcagcaaatatcgaggctttgagt 63
Query: 61 ggtctcatatgggcagtctccttggct 87
|||||| |||||||||||||||||||
Sbjct: 64 ggtctc--atgggcagtctccttggct 88
>46874_aqc-miR169b:pmrd
Length = 180
Score = 48.1 bits (24), Expect = 1e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatatcctct 28
||||||||||||||||||| ||||||||
Sbjct: 2 agccaaggatgacttgcctgtatcctct 29
>51675_ptc-miR169r:pmrd
Length = 119
Score = 46.1 bits (23), Expect = 4e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatatcctc 27
||||||||||||||||||||| |||||
Sbjct: 12 agccaaggatgacttgcctatttcctc 38
>48892_osa-miR169q:pmrd
Length = 108
Score = 46.1 bits (23), Expect = 4e-06
Identities = 38/43 (88%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgcctatatcctctctaaaggatcagcaa 43
||||||||||||||||||| | ||||| || |||||| |||||
Sbjct: 97 agccaaggatgacttgcctgtgtcctccctgaaggattagcaa 55
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 69 atgggcagtctccttggct 87
|||||||||||||||||||
Sbjct: 30 atgggcagtctccttggct 12
>48887_osa-miR169l:pmrd
Length = 108
Score = 46.1 bits (23), Expect = 4e-06
Identities = 38/43 (88%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatatcctctctaaaggatcagcaa 43
||||||||||||||||||| | ||||| || |||||| |||||
Sbjct: 12 agccaaggatgacttgcctgtgtcctccctgaaggattagcaa 54
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 69 atgggcagtctccttggct 87
|||||||||||||||||||
Sbjct: 79 atgggcagtctccttggct 97
>55015_zma-miR169m:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatatcct 26
||||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctatgtcct 27
>55014_zma-miR169l:pmrd
Length = 89
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatatcct 26
||||||||||||||||||||| ||||
Sbjct: 2 agccaaggatgacttgcctatgtcct 27
>55010_zma-miR169h:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatatcct 26
||||||||||||||||||||| ||||
Sbjct: 22 agccaaggatgacttgcctatgtcct 47
>55007_zma-miR169e:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgcctatatcct 26
||||||||||||||||||||| ||||
Sbjct: 108 agccaaggatgacttgcctatgtcct 83
>55006_zma-miR169d:pmrd
Length = 128
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgcctatatcct 26
||||||||||||||||||||| ||||
Sbjct: 108 agccaaggatgacttgcctatgtcct 83
>54826_vvi-miR169x:pmrd
Length = 125
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatatcc 25
|||||||||||||||||||| ||||
Sbjct: 13 agccaaggatgacttgcctaaatcc 37
>48882_osa-miR169g:pmrd
Length = 126
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctat 21
|||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcctat 32
>48354_bna-miR169e:pmrd
Length = 276
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctat 21
|||||||||||||||||||||
Sbjct: 252 agccaaggatgacttgcctat 272
>48352_bna-miR169c:pmrd
Length = 176
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctat 21
|||||||||||||||||||||
Sbjct: 27 agccaaggatgacttgcctat 47
>55009_zma-miR169g:pmrd
Length = 140
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccta 41
>55008_zma-miR169f:pmrd
Length = 150
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccta 41
>54550_sly-miR169d:pmrd
Length = 176
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 40 agccaaggatgacttgccta 59
>54440_sbi-miR169d:pmrd
Length = 125
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccta 41
>54439_sbi-miR169c:pmrd
Length = 126
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 22 agccaaggatgacttgccta 41
>48881_osa-miR169f:pmrd
Length = 170
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 12 agccaaggatgacttgccta 31
>48355_bna-miR169f:pmrd
Length = 201
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 32 agccaaggatgacttgccta 51
>48353_bna-miR169d:pmrd
Length = 220
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 41 agccaaggatgacttgccta 60
>46873_aqc-miR169a:pmrd
Length = 158
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgccta 20
||||||||||||||||||||
Sbjct: 27 agccaaggatgacttgccta 46
>55013_zma-miR169k:pmrd
Length = 133
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcct 40
>55012_zma-miR169j:pmrd
Length = 151
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcct 40
>55011_zma-miR169i:pmrd
Length = 191
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcct 40
>54807_vvi-miR169e:pmrd
Length = 149
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 13 agccaaggatgacttgcct 31
>54548_sly-miR169b:pmrd
Length = 205
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 172 agccaaggatgacttgcct 190
>54448_sbi-miR169l:pmrd
Length = 97
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 93 agccaaggatgacttgcct 75
>54444_sbi-miR169h:pmrd
Length = 155
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcct 40
>54443_sbi-miR169g:pmrd
Length = 152
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcct 40
>54442_sbi-miR169f:pmrd
Length = 148
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcct 40
>54441_sbi-miR169e:pmrd
Length = 240
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 22 agccaaggatgacttgcct 40
>52726_ptc-miRf10904-akr:pmrd
Length = 132
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 16 agccaaggatgacttgcct 34
>51678_ptc-miR169u:pmrd
Length = 122
Score = 38.2 bits (19), Expect = 0.001
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcctatatcctc 27
||||||||| ||||||||||| |||||
Sbjct: 12 agccaaggacgacttgcctatttcctc 38
>51673_ptc-miR169p:pmrd
Length = 104
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcct 30
>51672_ptc-miR169o:pmrd
Length = 104
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcct 30
>51670_ptc-miR169m:pmrd
Length = 119
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcct 30
>51669_ptc-miR169l:pmrd
Length = 143
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcct 30
>51668_ptc-miR169k:pmrd
Length = 203
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcct 30
>51667_ptc-miR169j:pmrd
Length = 137
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcct 30
>51666_ptc-miR169i:pmrd
Length = 123
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcct 30
>48888_osa-miR169m:pmrd
Length = 138
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcct 30
>48886_osa-miR169k:pmrd
Length = 156
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcct 30
>48885_osa-miR169j:pmrd
Length = 125
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcct 30
>48884_osa-miR169i:pmrd
Length = 108
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcct 30
>48883_osa-miR169h:pmrd
Length = 122
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 12 agccaaggatgacttgcct 30
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 69 atgggcagtctccttggct 87
|||||||||||||||||||
Sbjct: 92 atgggcagtctccttggct 110
>48487_ghb-miR169a:pmrd
Length = 189
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 51 agccaaggatgacttgcct 69
>48361_bna-miR169l:pmrd
Length = 199
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 26 agccaaggatgacttgcct 44
>48360_bna-miR169k:pmrd
Length = 155
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 35 agccaaggatgacttgcct 53
>48359_bna-miR169j:pmrd
Length = 167
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 10 agccaaggatgacttgcct 28
>48358_bna-miR169i:pmrd
Length = 174
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 16 agccaaggatgacttgcct 34
>48357_bna-miR169h:pmrd
Length = 176
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 38 agccaaggatgacttgcct 56
>48356_bna-miR169g:pmrd
Length = 168
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 38 agccaaggatgacttgcct 56
>47103_ath-miRf10003-akr:pmrd
Length = 141
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Minus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 120 agccaaggatgacttgcct 102
>46974_ath-miR169n:pmrd
Length = 215
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 46 agccaaggatgacttgcct 64
>46973_ath-miR169m:pmrd
Length = 212
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 43 agccaaggatgacttgcct 61
>46972_ath-miR169l:pmrd
Length = 211
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 45 agccaaggatgacttgcct 63
>46971_ath-miR169k:pmrd
Length = 213
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 44 agccaaggatgacttgcct 62
>46970_ath-miR169j:pmrd
Length = 221
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 52 agccaaggatgacttgcct 70
>46969_ath-miR169i:pmrd
Length = 206
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 41 agccaaggatgacttgcct 59
>46968_ath-miR169h:pmrd
Length = 190
Score = 38.2 bits (19), Expect = 0.001
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 1 agccaaggatgacttgcct 19
|||||||||||||||||||
Sbjct: 47 agccaaggatgacttgcct 65
