miRNEST 2.0, an integrative microRNA resource :: BLAST
>41463_ptc-MIR408:mirbase
Length = 105
Score = 60.0 bits (30), Expect = 3e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 62 ttgttgtggctctactcatgcactgcctcttccctggc 99
||||| ||||||||| ||||||||||||||||||||||
Sbjct: 59 ttgttttggctctacccatgcactgcctcttccctggc 96
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 10 aggcagagcatggatggagcta 31
||||||||||||||||||||||
Sbjct: 24 aggcagagcatggatggagcta 45
>41683_vvi-MIR408:mirbase
Length = 107
Score = 52.0 bits (26), Expect = 8e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 70 gctctactcatgcactgcctcttccctggc 99
||||||| ||||||||||||||||||||||
Sbjct: 68 gctctacccatgcactgcctcttccctggc 97
>40391_rco-MIR408:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 3e-07
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 63 tgttgtggctctactcatgcactgcctcttccctggc 99
|||| ||||||||| | ||||||||||||||||||||
Sbjct: 51 tgttttggctctacccctgcactgcctcttccctggc 87
>40108_ath-MIR408:mirbase
Length = 218
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 71 ctctactcatgcactgcctcttccctggc 99
|||||| ||||||||||||||||||||||
Sbjct: 112 ctctacccatgcactgcctcttccctggc 140
>39897_aly-MIR408:mirbase
Length = 211
Score = 50.1 bits (25), Expect = 3e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 71 ctctactcatgcactgcctcttccctggc 99
|||||| ||||||||||||||||||||||
Sbjct: 109 ctctacccatgcactgcctcttccctggc 137
>40405_ahy-MIR408:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 ctcatgcactgcctcttccctggc 99
||||||||||||||||||||||||
Sbjct: 78 ctcatgcactgcctcttccctggc 101
>40404_ahy-MIR408:mirbase
Length = 122
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 ctcatgcactgcctcttccctggc 99
||||||||||||||||||||||||
Sbjct: 78 ctcatgcactgcctcttccctggc 101
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 76 ctcatgcactgcctcttccctggc 99
||||||||||||||||||||||||
Sbjct: 90 ctcatgcactgcctcttccctggc 113
>41252_csi-MIR408:mirbase
Length = 153
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 78 catgcactgcctcttccctggc 99
||||||||||||||||||||||
Sbjct: 119 catgcactgcctcttccctggc 140
>41193_aqc-MIR408:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 78 catgcactgcctcttccctggc 99
||||||||||||||||||||||
Sbjct: 23 catgcactgcctcttccctggc 2
>39742_smo-MIR408:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 79 atgcactgcctcttccctggc 99
|||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggc 96
>39428_pta-MIR408:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 79 atgcactgcctcttccctggc 99
|||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggc 84
>42830_zma-MIR408b:mirbase
Length = 147
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggc 99
||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggc 145
>42829_zma-MIR408:mirbase
Length = 191
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggc 99
||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggc 172
>42647_tae-MIR408:mirbase
Length = 187
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggc 99
||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggc 156
>42600_sbi-MIR408:mirbase
Length = 205
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggc 99
||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggc 204
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggc 99
||||||||||||||||||||
Sbjct: 159 tgcactgcctcttccctggc 178
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggc 99
||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggc 246
>42465_sof-MIR408d:mirbase
Length = 215
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggc 99
||||||||||||||||||||
Sbjct: 177 tgcactgcctcttccctggc 196
>42464_sof-MIR408c:mirbase
Length = 286
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggc 99
||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggc 267
>42463_sof-MIR408b:mirbase
Length = 286
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggc 99
||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggc 267
>42462_sof-MIR408a:mirbase
Length = 283
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggc 99
||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggc 264
>42052_osa-MIR408:mirbase
Length = 213
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgcactgcctcttccctggc 99
||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggc 173
