miRNEST 2.0, an integrative microRNA resource :: BLAST
>40363_rco-MIR171e:mirbase
Length = 84
Score = 91.7 bits (46), Expect = 6e-20
Identities = 68/74 (91%), Gaps = 1/74 (1%)
Strand = Plus / Plus
Query: 1 atgttggaacggctcaatcaaatcaaatctccc-aagaattgggtcctttagtttgattg 59
||||||||| ||||||||||||||||||||||| ||| |||||||||||| | ||||||
Sbjct: 5 atgttggaatggctcaatcaaatcaaatctcccaaagttttgggtcctttaatctgattg 64
Query: 60 agccgtgccaatat 73
||||||||||||||
Sbjct: 65 agccgtgccaatat 78
>41630_vvi-MIR171i:mirbase
Length = 103
Score = 87.7 bits (44), Expect = 1e-18
Identities = 68/75 (90%), Gaps = 2/75 (2%)
Strand = Plus / Plus
Query: 1 atgttggaacggctcaatcaaatcaaatctcccaa--gaattgggtcctttagtttgatt 58
||||||||| ||||||||||||||||||||||||| | |||||||||||| | |||||
Sbjct: 14 atgttggaatggctcaatcaaatcaaatctcccaagggttttgggtcctttaatctgatt 73
Query: 59 gagccgtgccaatat 73
|||||||||||||||
Sbjct: 74 gagccgtgccaatat 88
>41178_aqc-MIR171b:mirbase
Length = 77
Score = 79.8 bits (40), Expect = 2e-16
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 2 tgttggaacggctcaatcaaatcaaatctcccaagaattgggtcctttagtttgattgag 61
|||||||| ||||||||||||| ||| ||| ||| ||||||||||||| | ||||||||
Sbjct: 3 tgttggaatggctcaatcaaatgaaagctctcaaagattgggtcctttaatctgattgag 62
Query: 62 ccgtgccaatat 73
||||||||||||
Sbjct: 63 ccgtgccaatat 74
>41121_tcc-MIR171f:mirbase
Length = 117
Score = 71.9 bits (36), Expect = 6e-14
Identities = 67/77 (87%), Gaps = 4/77 (5%)
Strand = Plus / Plus
Query: 1 atgttggaacggctcaatcaaatcaaatctcccaagaat----tgggtcctttagtttga 56
||||||||| |||||||||||||||||||||||||| | ||||| |||| |||||
Sbjct: 20 atgttggaatggctcaatcaaatcaaatctcccaagctttttatgggtgttttaatttga 79
Query: 57 ttgagccgtgccaatat 73
|||||||||||||||||
Sbjct: 80 ttgagccgtgccaatat 96
>41622_vvi-MIR171a:mirbase
Length = 99
Score = 58.0 bits (29), Expect = 9e-10
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 1 atgttggaacggctcaatcaaatcaaatctcccaagaattgggtcctttagtttgattga 60
||||||| |||||||||||||| |||| || ||| ||| |||||||| | |||||||
Sbjct: 15 atgttgggacggctcaatcaaaccaaagatctcaatggttgagtcctttaatctgattga 74
Query: 61 gccgtgccaatat 73
|||||||||||||
Sbjct: 75 gccgtgccaatat 87
>41122_tcc-MIR171g:mirbase
Length = 115
Score = 54.0 bits (27), Expect = 1e-08
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 43 gtcctttagtttgattgagccgtgccaatat 73
|||||||||| ||||||||||||||||||||
Sbjct: 64 gtcctttagtctgattgagccgtgccaatat 94
>42546_sbi-MIR171a:mirbase
Length = 161
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gtttgattgagccgtgccaatat 73
|||||||||||||||||||||||
Sbjct: 119 gtttgattgagccgtgccaatat 141
>41625_vvi-MIR171d:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gtttgattgagccgtgccaatat 73
|||||||||||||||||||||||
Sbjct: 64 gtttgattgagccgtgccaatat 86
>41538_sly-MIR171a:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gtttgattgagccgtgccaatat 73
|||||||||||||||||||||||
Sbjct: 84 gtttgattgagccgtgccaatat 106
>41388_ptc-MIR171h:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 3e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 1 atgttggaacggctcaatcaaatcaaatctcccaa 35
||||||| | |||||||||| ||||||||||||||
Sbjct: 12 atgttgggatggctcaatcatatcaaatctcccaa 46
Score = 46.1 bits (23), Expect = 3e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 39 ttgggtcctttagtttgattgagccgtgccaatat 73
||||||| |||| | ||||||||||||||||||||
Sbjct: 56 ttgggtcgtttaatctgattgagccgtgccaatat 90
>41387_ptc-MIR171g:mirbase
Length = 100
Score = 46.1 bits (23), Expect = 3e-06
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 39 ttgggtcctttagtttgattgagccgtgccaatat 73
||||||| |||| | ||||||||||||||||||||
Sbjct: 56 ttgggtcttttaatctgattgagccgtgccaatat 90
Score = 38.2 bits (19), Expect = 8e-04
Identities = 31/35 (88%)
Strand = Plus / Plus
Query: 1 atgttggaacggctcaatcaaatcaaatctcccaa 35
||||||| | |||||||||| |||||||||||||
Sbjct: 12 atgttgggatggctcaatcatgtcaaatctcccaa 46
>41382_ptc-MIR171b:mirbase
Length = 103
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gtttgattgagccgtgccaatat 73
|||||||||||||||||||||||
Sbjct: 68 gtttgattgagccgtgccaatat 90
>41381_ptc-MIR171a:mirbase
Length = 104
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gtttgattgagccgtgccaatat 73
|||||||||||||||||||||||
Sbjct: 69 gtttgattgagccgtgccaatat 91
>41181_aqc-MIR171e:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 51 gtttgattgagccgtgccaatat 73
|||||||||||||||||||||||
Sbjct: 24 gtttgattgagccgtgccaatat 2
>41177_aqc-MIR171a:mirbase
Length = 102
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gtttgattgagccgtgccaatat 73
|||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatat 99
>40701_mtr-MIR171g:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gtttgattgagccgtgccaatat 73
|||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatat 99
>40698_mtr-MIR171d:mirbase
Length = 105
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gtttgattgagccgtgccaatat 73
|||||||||||||||||||||||
Sbjct: 77 gtttgattgagccgtgccaatat 99
>40360_rco-MIR171b:mirbase
Length = 91
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gtttgattgagccgtgccaatat 73
|||||||||||||||||||||||
Sbjct: 60 gtttgattgagccgtgccaatat 82
>40318_bra-MIR171a:mirbase
Length = 85
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gtttgattgagccgtgccaatat 73
|||||||||||||||||||||||
Sbjct: 59 gtttgattgagccgtgccaatat 81
>40305_bol-MIR171a:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gtttgattgagccgtgccaatat 73
|||||||||||||||||||||||
Sbjct: 65 gtttgattgagccgtgccaatat 87
>40289_bna-MIR171e:mirbase
Length = 92
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gtttgattgagccgtgccaatat 73
|||||||||||||||||||||||
Sbjct: 64 gtttgattgagccgtgccaatat 86
>40288_bna-MIR171d:mirbase
Length = 96
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gtttgattgagccgtgccaatat 73
|||||||||||||||||||||||
Sbjct: 65 gtttgattgagccgtgccaatat 87
>39851_aly-MIR171c:mirbase
Length = 111
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 51 gtttgattgagccgtgccaatat 73
|||||||||||||||||||||||
Sbjct: 71 gtttgattgagccgtgccaatat 93
>42762_zma-MIR171b:mirbase
Length = 85
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatat 81
>42556_sbi-MIR171k:mirbase
Length = 87
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 60 tttgattgagccgtgccaatat 81
>41983_osa-MIR171c:mirbase
Length = 99
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 67 tttgattgagccgtgccaatat 88
>41982_osa-MIR171b:mirbase
Length = 100
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatat 89
>41766_bdi-MIR171c:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatat 83
>41624_vvi-MIR171c:mirbase
Length = 103
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 68 tttgattgagccgtgccaatat 89
>41389_ptc-MIR171i:mirbase
Length = 129
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 98 tttgattgagccgtgccaatat 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 4 ttggaacggctcaatcaaatcaaa 27
|||| |||||||||||||||||||
Sbjct: 116 ttggcacggctcaatcaaatcaaa 93
>41385_ptc-MIR171e:mirbase
Length = 94
Score = 44.1 bits (22), Expect = 1e-05
Identities = 52/62 (83%)
Strand = Plus / Plus
Query: 12 gctcaatcaaatcaaatctcccaagaattgggtcctttagtttgattgagccgtgccaat 71
|||||||||||||||| | | ||| |||||| |||| | ||||||||||||||||||
Sbjct: 23 gctcaatcaaatcaaagcactcaatggttgggttctttcatctgattgagccgtgccaat 82
Query: 72 at 73
||
Sbjct: 83 at 84
>41216_crt-MIR171:mirbase
Length = 201
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 159 tttgattgagccgtgccaatat 180
>41180_aqc-MIR171d:mirbase
Length = 106
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 82 tttgattgagccgtgccaatat 103
>41120_tcc-MIR171e:mirbase
Length = 161
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 119 tttgattgagccgtgccaatat 140
>41119_tcc-MIR171d:mirbase
Length = 117
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 75 tttgattgagccgtgccaatat 96
>40700_mtr-MIR171f:mirbase
Length = 95
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 65 tttgattgagccgtgccaatat 86
>40697_mtr-MIR171c:mirbase
Length = 105
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 78 tttgattgagccgtgccaatat 99
>40457_gma-MIR171c:mirbase
Length = 104
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 70 tttgattgagccgtgccaatat 91
>40364_rco-MIR171f:mirbase
Length = 111
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 84 tttgattgagccgtgccaatat 105
>40362_rco-MIR171d:mirbase
Length = 124
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 97 tttgattgagccgtgccaatat 118
>40359_rco-MIR171a:mirbase
Length = 92
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 62 tttgattgagccgtgccaatat 83
>40062_ath-MIR171c:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 52 tttgattgagccgtgccaatat 73
||||||||||||||||||||||
Sbjct: 85 tttgattgagccgtgccaatat 106
>42769_zma-MIR171i:mirbase
Length = 104
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 ttgattgagccgtgccaatat 73
|||||||||||||||||||||
Sbjct: 64 ttgattgagccgtgccaatat 84
>42766_zma-MIR171f:mirbase
Length = 155
Score = 42.1 bits (21), Expect = 5e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 53 ttgattgagccgtgccaatat 73
|||||||||||||||||||||
Sbjct: 114 ttgattgagccgtgccaatat 134
>42770_zma-MIR171j:mirbase
Length = 129
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgattgagccgtgccaatat 73
||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatat 109
>42765_zma-MIR171e:mirbase
Length = 126
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgattgagccgtgccaatat 73
||||||||||||||||||||
Sbjct: 87 tgattgagccgtgccaatat 106
>42764_zma-MIR171d:mirbase
Length = 121
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgattgagccgtgccaatat 73
||||||||||||||||||||
Sbjct: 82 tgattgagccgtgccaatat 101
>42640_tae-MIR171a:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgattgagccgtgccaatat 73
||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatat 108
>42554_sbi-MIR171i:mirbase
Length = 90
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgattgagccgtgccaatat 73
||||||||||||||||||||
Sbjct: 68 tgattgagccgtgccaatat 87
>42549_sbi-MIR171d:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgattgagccgtgccaatat 73
||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatat 133
>42547_sbi-MIR171b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgattgagccgtgccaatat 73
||||||||||||||||||||
Sbjct: 93 tgattgagccgtgccaatat 112
>41986_osa-MIR171f:mirbase
Length = 127
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgattgagccgtgccaatat 73
||||||||||||||||||||
Sbjct: 97 tgattgagccgtgccaatat 116
>41985_osa-MIR171e:mirbase
Length = 119
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgattgagccgtgccaatat 73
||||||||||||||||||||
Sbjct: 89 tgattgagccgtgccaatat 108
>41984_osa-MIR171d:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgattgagccgtgccaatat 73
||||||||||||||||||||
Sbjct: 105 tgattgagccgtgccaatat 124
>41890_hvu-MIR171:mirbase
Length = 173
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgattgagccgtgccaatat 73
||||||||||||||||||||
Sbjct: 112 tgattgagccgtgccaatat 131
>41874_far-MIR171:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgattgagccgtgccaatat 73
||||||||||||||||||||
Sbjct: 90 tgattgagccgtgccaatat 109
>41765_bdi-MIR171b:mirbase
Length = 164
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgattgagccgtgccaatat 73
||||||||||||||||||||
Sbjct: 114 tgattgagccgtgccaatat 133
>41386_ptc-MIR171f:mirbase
Length = 130
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgattgagccgtgccaatat 73
||||||||||||||||||||
Sbjct: 101 tgattgagccgtgccaatat 120
>41123_tcc-MIR171h:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgattgagccgtgccaatat 73
||||||||||||||||||||
Sbjct: 95 tgattgagccgtgccaatat 114
>40695_mtr-MIR171:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 2e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 46 ctttagtttgattgagccgtgccaatat 73
||||||| |||||||| |||||||||||
Sbjct: 67 ctttagtctgattgagtcgtgccaatat 94
>40361_rco-MIR171c:mirbase
Length = 87
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 54 tgattgagccgtgccaatat 73
||||||||||||||||||||
Sbjct: 62 tgattgagccgtgccaatat 81
