miRNEST 2.0, an integrative microRNA resource :: BLAST
>40338_rco-MIR159:mirbase
Length = 180
Score = 188 bits (95), Expect = 1e-48
Identities = 161/181 (88%), Gaps = 9/181 (4%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 4 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 63
Query: 61 atcccacagccctatctcataataaagactctagtcttcttggataggcttgtggcttgc 120
||||||||||||||| | | ||| | || | |||||||||||||||||||||
Sbjct: 64 atcccacagccctat----aagcagagattata---attttggataggcttgtggcttgc 116
Query: 121 atatctcaggagcttcattacctcttatgttagatccttgtttggattgaagggagctct 180
||||||||||||||||||||| ||| | |||||||||||||||||||||||||||||||
Sbjct: 117 atatctcaggagcttcattac--cttgtattagatccttgtttggattgaagggagctct 174
Query: 181 a 181
|
Sbjct: 175 a 175
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 129 bits (65), Expect = 8e-31
Identities = 155/182 (85%), Gaps = 11/182 (6%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
Query: 61 atcccacagccctatctcat-aataaagactctagtcttcttggataggcttgtggcttg 119
|||||||||||||||| | | ||| | | | ||||||||||||||||||||
Sbjct: 69 atcccacagccctatcccgtcaatgggg------ggc--attggataggcttgtggcttg 120
Query: 120 catatctcaggagcttcattacctcttatgttagatccttgtttggattgaagggagctc 179
||||||||||||||| ||||| || | ||||||||||||||||||||||||||||||
Sbjct: 121 catatctcaggagctgcatta--tccaagtttagatccttgtttggattgaagggagctc 178
Query: 180 ta 181
||
Sbjct: 179 ta 180
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 111 bits (56), Expect = 2e-25
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||| | || |||||||||||| ||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 70
Query: 61 atcccacagccctatc 76
||||||||||||||||
Sbjct: 71 atcccacagccctatc 86
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 105 bits (53), Expect = 1e-23
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 atcccacagccctatct 77
|| |||||| |||||||
Sbjct: 71 at-ccacagtcctatct 86
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 105 bits (53), Expect = 1e-23
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 atcccacagccctatct 77
|| |||||| |||||||
Sbjct: 71 at-ccacagtcctatct 86
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 105 bits (53), Expect = 1e-23
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
||||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 atcccacag 69
|||||||||
Sbjct: 62 atcccacag 70
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 154 atccttgtttggattgaagggagctcta 181
|||||| |||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctcta 173
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 105 bits (53), Expect = 1e-23
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
||||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 atcccacag 69
|||||||||
Sbjct: 62 atcccacag 70
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 154 atccttgtttggattgaagggagctcta 181
|||||| |||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctcta 173
>40397_ahy-MIR159:mirbase
Length = 197
Score = 105 bits (53), Expect = 1e-23
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
|||||||||||||||||||| ||||| ||||| |||||||||||||||||| ||||||||
Sbjct: 3 tggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgg 62
Query: 61 atcccacag 69
|||||||||
Sbjct: 63 atcccacag 71
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 152 agatccttgtttggattgaagggagctcta 181
|||||||| |||||||||||||||||||||
Sbjct: 148 agatccttatttggattgaagggagctcta 177
>40432_gma-MIR159a:mirbase
Length = 214
Score = 97.6 bits (49), Expect = 3e-21
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
||||||||||||||||||||| ||||||||| |||||| ||||||||||| ||||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 61 atcccacag 69
|||||||||
Sbjct: 81 atcccacag 89
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 156 ccttgtttggattgaagggagctcta 181
|||| |||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctcta 195
>41218_csi-MIR159:mirbase
Length = 216
Score = 87.7 bits (44), Expect = 3e-18
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgct-gggtagattgagctgctgagctatg 59
|||||||||||||||||||| ||||| ||| || ||||| |||||||||||||||||||
Sbjct: 12 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 71
Query: 60 gatcccacagccctat 75
|||||||||| |||||
Sbjct: 72 gatcccacagtcctat 87
Score = 58.0 bits (29), Expect = 2e-09
Identities = 41/45 (91%)
Strand = Plus / Plus
Query: 103 gataggcttgtggcttgcatatctcaggagcttcattacctctta 147
|||||||||||||||||||||| || ||| |||||||||| ||||
Sbjct: 125 gataggcttgtggcttgcatatttctggaccttcattacccctta 169
>41528_sly-MIR159:mirbase
Length = 177
Score = 58.0 bits (29), Expect = 2e-09
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
|||||||||||||||||||| | | |||| | || || ||||||||||||| ||||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 61 atcccacagccctatct 77
|| || |||||||||||
Sbjct: 61 attcctcagccctatct 77
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 148 tgttagatccttgtttggattgaagggagctcta 181
|||| |||| || |||||||||||||||||||||
Sbjct: 144 tgtttgatcattttttggattgaagggagctcta 177
>40435_gma-MIR159d:mirbase
Length = 103
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 41 attgagctgctgagctatggatcccacag 69
||||||||||| |||||||||||||||||
Sbjct: 7 attgagctgcttagctatggatcccacag 35
>39804_aly-MIR159a:mirbase
Length = 222
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 113 tggcttgcatatctcaggagctt 135
|||||||||||||||||||||||
Sbjct: 130 tggcttgcatatctcaggagctt 152
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctcta 181
|||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctcta 203
>42700_zma-MIR159k:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tgtttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctct 198
>42699_zma-MIR159j:mirbase
Length = 252
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tgtttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctct 250
>42691_zma-MIR159b:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tgtttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>42634_tae-MIR159a:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tgtttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tgtttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 9 tgtttggattgaagggagctct 30
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tgtttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctct 175
