miRNEST 2.0, an integrative microRNA resource :: BLAST
>54777_vvi-miR159c:pmrd
Length = 190
Score = 129 bits (65), Expect = 8e-31
Identities = 155/182 (85%), Gaps = 11/182 (6%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||||| |||| ||||||||||||||||||||| |||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
Query: 61 atcccacagccctatctcat-aataaagactctagtcttcttggataggcttgtggcttg 119
|||||||||||||||| | | ||| | | | ||||||||||||||||||||
Sbjct: 69 atcccacagccctatcccgtcaatgggg------ggc--attggataggcttgtggcttg 120
Query: 120 catatctcaggagcttcattacctcttatgttagatccttgtttggattgaagggagctc 179
||||||||||||||| ||||| || | ||||||||||||||||||||||||||||||
Sbjct: 121 catatctcaggagctgcatta--tccaagtttagatccttgtttggattgaagggagctc 178
Query: 180 ta 181
||
Sbjct: 179 ta 180
>51603_ptc-miR159b:pmrd
Length = 187
Score = 111 bits (56), Expect = 2e-25
Identities = 71/76 (93%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||| | || |||||||||||| ||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 70
Query: 61 atcccacagccctatc 76
||||||||||||||||
Sbjct: 71 atcccacagccctatc 86
>54378_pvu-miR159:pmrd
Length = 174
Score = 105 bits (53), Expect = 1e-23
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
||||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 atcccacag 69
|||||||||
Sbjct: 62 atcccacag 70
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 154 atccttgtttggattgaagggagctcta 181
|||||| |||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctcta 173
>54377_pvu-miR159:pmrd
Length = 174
Score = 105 bits (53), Expect = 1e-23
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
||||||||||||||||||||| ||||||||| |||||| |||||||||||| ||||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 atcccacag 69
|||||||||
Sbjct: 62 atcccacag 70
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 154 atccttgtttggattgaagggagctcta 181
|||||| |||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctcta 173
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 105 bits (53), Expect = 1e-23
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||
Sbjct: 6 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 65
Query: 61 atcccacagccctatct 77
|| |||||| |||||||
Sbjct: 66 at-ccacagtcctatct 81
>51604_ptc-miR159c:pmrd
Length = 183
Score = 105 bits (53), Expect = 1e-23
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 atcccacagccctatct 77
|| |||||| |||||||
Sbjct: 71 at-ccacagtcctatct 86
>51602_ptc-miR159a:pmrd
Length = 183
Score = 105 bits (53), Expect = 1e-23
Identities = 72/77 (93%), Gaps = 1/77 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
|||||||||||||||||||||||||| |||||||||||||||| ||||||| ||||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 atcccacagccctatct 77
|| |||||| |||||||
Sbjct: 71 at-ccacagtcctatct 86
>48539_gma-miR159a:pmrd
Length = 214
Score = 97.6 bits (49), Expect = 3e-21
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
||||||||||||||||||||| ||||||||| |||||| ||||||||||| ||||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 61 atcccacag 69
|||||||||
Sbjct: 81 atcccacag 89
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 156 ccttgtttggattgaagggagctcta 181
|||| |||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctcta 195
>54540_sly-miR159:pmrd
Length = 177
Score = 58.0 bits (29), Expect = 2e-09
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 1 tggagctccttgaagtccaatagaggatcttgctgggtagattgagctgctgagctatgg 60
|||||||||||||||||||| | | |||| | || || ||||||||||||| ||||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 61 atcccacagccctatct 77
|| || |||||||||||
Sbjct: 61 attcctcagccctatct 77
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 148 tgttagatccttgtttggattgaagggagctcta 181
|||| |||| || |||||||||||||||||||||
Sbjct: 144 tgtttgatcattttttggattgaagggagctcta 177
>54931_zma-miR159b:pmrd
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tgtttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>54673_tae-miR159a:pmrd
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tgtttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>48657_hvv-miR159b:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 159 tgtttggattgaagggagctct 180
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>48701_mtr-miR159c:pmrd
Length = 44
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctcta 181
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
>48699_mtr-miR159a:pmrd
Length = 168
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctcta 181
|||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctcta 168
>48686_ltu-miR159:pmrd
Length = 345
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctcta 181
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
>48395_bra-miR159a:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctcta 181
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>48339_bna-miR159:pmrd
Length = 183
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctcta 181
|||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctcta 181
>46931_ath-miR159a:pmrd
Length = 184
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 161 tttggattgaagggagctcta 181
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
