miRNEST 2.0, an integrative microRNA resource :: BLAST
>40311_bra-MIR159a:mirbase
Length = 185
Score = 274 bits (138), Expect = 2e-74
Identities = 168/178 (94%)
Strand = Plus / Plus
Query: 1 agggctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatgg 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5 agggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatga 64
Query: 61 ataccataagccctaatccttgtattgaaaaaggacttggtaatatggcttgcatatctc 120
|| |||||||||||||||||| ||| |||||||| ||||| ||||||||| ||||||||
Sbjct: 65 atcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctc 124
Query: 121 aggagctttaacttaccctttaattgcttttactcttctttggattgaagggagctct 178
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 182
>40261_bna-MIR159:mirbase
Length = 183
Score = 274 bits (138), Expect = 2e-74
Identities = 168/178 (94%)
Strand = Plus / Plus
Query: 1 agggctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatgg 60
|||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 3 agggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatga 62
Query: 61 ataccataagccctaatccttgtattgaaaaaggacttggtaatatggcttgcatatctc 120
|| |||||||||||||||||| ||| |||||||| ||||| ||||||||| ||||||||
Sbjct: 63 atcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatctc 122
Query: 121 aggagctttaacttaccctttaattgcttttactcttctttggattgaagggagctct 178
|||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 123 aggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctct 180
>39804_aly-MIR159a:mirbase
Length = 222
Score = 230 bits (116), Expect = 3e-61
Identities = 163/178 (91%), Gaps = 3/178 (1%)
Strand = Plus / Plus
Query: 4 gctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatggata 63
||||||| |||||||||||||||| ||| |||||||||||||||||||||||||||||
Sbjct: 25 gctccttgaagttcaaacgagagttgagcagggtaaagaaaagctgctaagctatggatc 84
Query: 64 ccataagccctaatccttgtattg---aaaaaggacttggtaatatggcttgcatatctc 120
|||||||||||||||||| || | |||||||| ||||| ||||||||||||||||||
Sbjct: 85 ccataagccctaatccttataaagaaaaaaaaggatttggttatatggcttgcatatctc 144
Query: 121 aggagctttaacttaccctttaattgcttttactcttctttggattgaagggagctct 178
|||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 145 aggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctct 202
>40016_ath-MIR159a:mirbase
Length = 184
Score = 226 bits (114), Expect = 4e-60
Identities = 162/177 (91%), Gaps = 2/177 (1%)
Strand = Plus / Plus
Query: 4 gctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatggata 63
|||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||
Sbjct: 6 gctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctatggatc 65
Query: 64 ccataagccctaatccttgtattg--aaaaaggacttggtaatatggcttgcatatctca 121
||||||||||||||||||||| | |||||||| ||||| |||||| ||||||||||||
Sbjct: 66 ccataagccctaatccttgtaaagtaaaaaaggatttggttatatggattgcatatctca 125
Query: 122 ggagctttaacttaccctttaattgcttttactcttctttggattgaagggagctct 178
||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 126 ggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctct 182
>39805_aly-MIR159b:mirbase
Length = 202
Score = 79.8 bits (40), Expect = 6e-16
Identities = 69/76 (90%), Gaps = 2/76 (2%)
Strand = Plus / Plus
Query: 104 tatggcttgcatatctcaggagctttaacttaccc-tttaattgcttttactcttctttg 162
||||| || ||||||||||||||||| |||||||| |||||| |||| |||||||||||
Sbjct: 114 tatggattccatatctcaggagctttcacttacccctttaatggcttc-actcttctttg 172
Query: 163 gattgaagggagctct 178
||||||||||||||||
Sbjct: 173 gattgaagggagctct 188
Score = 67.9 bits (34), Expect = 2e-12
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 4 gctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatggata 63
||||||| ||||||| ||| ||||||| |||||||| ||||||||||||||||||||
Sbjct: 19 gctccttgaagttcaatggagggtttagcagggtaaagtaaagctgctaagctatggatc 78
Query: 64 ccataa 69
||||||
Sbjct: 79 ccataa 84
>40017_ath-MIR159b:mirbase
Length = 196
Score = 77.8 bits (39), Expect = 3e-15
Identities = 62/67 (92%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 113 catatctcaggagctttaacttaccc-tttaattgcttttactcttctttggattgaagg 171
||||||||||||||||| |||||||| |||||| |||| ||||||||||||||||||||
Sbjct: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
Query: 172 gagctct 178
|||||||
Sbjct: 181 gagctct 187
Score = 65.9 bits (33), Expect = 1e-11
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 4 gctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatggata 63
||||||| ||||||| ||| ||||||| |||| ||| ||||||||||||||||||||
Sbjct: 7 gctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatggatc 66
Query: 64 ccataagcc 72
|||||||||
Sbjct: 67 ccataagcc 75
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 ggcttgcatatctcaggagcttta 130
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 tttggattgaagggagctct 178
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 ggcttgcatatctcaggagcttta 130
||||||||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 tttggattgaagggagctct 178
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 107 ggcttgcatatctcaggagcttta 130
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 tttggattgaagggagctct 178
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 155 cttctttggattgaagggagctct 178
||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 155 cttctttggattgaagggagctct 178
||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctct 172
>40432_gma-MIR159a:mirbase
Length = 214
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 155 cttctttggattgaagggagctct 178
||||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctct 194
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 156 ttctttggattgaagggagctct 178
|||||||||||||||||||||||
Sbjct: 149 ttctttggattgaagggagctct 171
>40338_rco-MIR159:mirbase
Length = 180
Score = 46.1 bits (23), Expect = 9e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 106 tggcttgcatatctcaggagctt 128
|||||||||||||||||||||||
Sbjct: 109 tggcttgcatatctcaggagctt 131
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 tttggattgaagggagctct 178
||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctct 174
>42695_zma-MIR159f:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 192 tctttggattgaagggagctct 213
>42690_zma-MIR159a:mirbase
Length = 246
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>42635_tae-MIR159b:mirbase
Length = 255
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>42494_sbi-MIR159:mirbase
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 202 tctttggattgaagggagctct 223
>42468_ssp-MIR159a:mirbase
Length = 261
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 221 tctttggattgaagggagctct 242
>42455_sof-MIR159d:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>42453_sof-MIR159b:mirbase
Length = 266
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>42452_sof-MIR159a:mirbase
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>41918_osa-MIR159b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>41917_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41916_osa-MIR159a:mirbase
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>41868_far-MIR159:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 157 tctttggattgaagggagctct 178
||||||||||||||||||||||
Sbjct: 167 tctttggattgaagggagctct 188
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 tggcttgcatatctcaggagct 127
||||||||||||||||||||||
Sbjct: 114 tggcttgcatatctcaggagct 135
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 159 tttggattgaagggagctct 178
||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctct 179
