miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46795_miR398:micropc
Length = 101
Score = 196 bits (99), Expect = 2e-51
Identities = 99/99 (100%)
Strand = Plus / Plus
Query: 1 aggggcgacctgcgaccacacgagctgaagtccttcatcgaaatctcgtccctcgattgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 aggggcgacctgcgaccacacgagctgaagtccttcatcgaaatctcgtccctcgattgc 61
Query: 61 tgcaatcggacggtgcccgtgtgttctcaggtcgcccct 99
|||||||||||||||||||||||||||||||||||||||
Sbjct: 62 tgcaatcggacggtgcccgtgtgttctcaggtcgcccct 100
>46392_miR398:micropc
Length = 68
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 78 cgtgtgttctcaggtcgcccct 99
||||||||||||||||||||||
Sbjct: 46 cgtgtgttctcaggtcgcccct 67
>45898_miR398:micropc
Length = 66
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 78 cgtgtgttctcaggtcgcccct 99
||||||||||||||||||||||
Sbjct: 45 cgtgtgttctcaggtcgcccct 66
>46725_miR398:micropc
Length = 67
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 47 tgtgttctcaggtcgcccct 66
>46690_miR398:micropc
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 56 tgtgttctcaggtcgcccct 75
>46686_miR398:micropc
Length = 96
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 77 tgtgttctcaggtcgcccct 96
>46604_miR398:micropc
Length = 67
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 47 tgtgttctcaggtcgcccct 66
>46371_miR398:micropc
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 57 tgtgttctcaggtcgcccct 76
>46304_miR398:micropc
Length = 59
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 40 tgtgttctcaggtcgcccct 59
>46303_miR398:micropc
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 56 tgtgttctcaggtcgcccct 75
>46116_miR398:micropc
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 57 tgtgttctcaggtcgcccct 76
>46114_miR398:micropc
Length = 65
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 46 tgtgttctcaggtcgcccct 65
>46111_miR398:micropc
Length = 76
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 57 tgtgttctcaggtcgcccct 76
>46074_miR398:micropc
Length = 75
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 56 tgtgttctcaggtcgcccct 75
>46034_miR398:micropc
Length = 77
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 57 tgtgttctcaggtcgcccct 76
>45519_miR398:micropc
Length = 61
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 41 tgtgttctcaggtcgcccct 60
>45422_miR398:micropc
Length = 78
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 58 tgtgttctcaggtcgcccct 77
>45294_miR398:micropc
Length = 98
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 78 tgtgttctcaggtcgcccct 97
>45192_miR398:micropc
Length = 65
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 46 tgtgttctcaggtcgcccct 65
>45095_miR398:micropc
Length = 87
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 68 tgtgttctcaggtcgcccct 87
>44891_miR398:micropc
Length = 89
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 80 tgtgttctcaggtcgcccct 99
||||||||||||||||||||
Sbjct: 69 tgtgttctcaggtcgcccct 88
