miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>46471_miR399:micropc
Length = 90
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 caggcgactctcccttggcaaacggatgatgatcactattcaccatgcaaattaatgcat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 caggcgactctcccttggcaaacggatgatgatcactattcaccatgcaaattaatgcat 60
Query: 61 aatctgctttgccaaaggagaattgccctg 90
||||||||||||||||||||||||||||||
Sbjct: 61 aatctgctttgccaaaggagaattgccctg 90
>46490_miR399:micropc
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 3 ggcgactctcccttggcaaacggatgatgatcactattcaccatgcaaattaatgcataa 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcgactctcccttggcaaacggatgatgatcactattcaccatgcaaattaatgcataa 60
Query: 63 tctgctttgccaaaggagaattgccc 88
||||||||||||||||||||||||||
Sbjct: 61 tctgctttgccaaaggagaattgccc 86
>46173_miR399:micropc
Length = 86
Score = 170 bits (86), Expect = 1e-43
Identities = 86/86 (100%)
Strand = Plus / Plus
Query: 3 ggcgactctcccttggcaaacggatgatgatcactattcaccatgcaaattaatgcataa 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 ggcgactctcccttggcaaacggatgatgatcactattcaccatgcaaattaatgcataa 60
Query: 63 tctgctttgccaaaggagaattgccc 88
||||||||||||||||||||||||||
Sbjct: 61 tctgctttgccaaaggagaattgccc 86
>46746_miR399:micropc
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 70 tgccaaaggagaattgccctg 90
|||||||||||||||||||||
Sbjct: 66 tgccaaaggagaattgccctg 86
>46133_miR399:micropc
Length = 124
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 70 tgccaaaggagaattgccctg 90
|||||||||||||||||||||
Sbjct: 104 tgccaaaggagaattgccctg 124
>45856_miR399:micropc
Length = 124
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 70 tgccaaaggagaattgccctg 90
|||||||||||||||||||||
Sbjct: 104 tgccaaaggagaattgccctg 124
>45532_miR399:micropc
Length = 114
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 70 tgccaaaggagaattgccctg 90
|||||||||||||||||||||
Sbjct: 94 tgccaaaggagaattgccctg 114
>45183_miR399:micropc
Length = 114
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 70 tgccaaaggagaattgccctg 90
|||||||||||||||||||||
Sbjct: 94 tgccaaaggagaattgccctg 114
>45072_miR399:micropc
Length = 86
Score = 42.1 bits (21), Expect = 7e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 70 tgccaaaggagaattgccctg 90
|||||||||||||||||||||
Sbjct: 66 tgccaaaggagaattgccctg 86
>46617_miR399:micropc
Length = 122
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 tgccaaaggagaattgccct 89
||||||||||||||||||||
Sbjct: 103 tgccaaaggagaattgccct 122
>46409_miR399:micropc
Length = 112
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 tgccaaaggagaattgccct 89
||||||||||||||||||||
Sbjct: 93 tgccaaaggagaattgccct 112
>45403_miR399:micropc
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 tgccaaaggagaattgccct 89
||||||||||||||||||||
Sbjct: 65 tgccaaaggagaattgccct 84
>45028_miR399:micropc
Length = 84
Score = 40.1 bits (20), Expect = 3e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 70 tgccaaaggagaattgccct 89
||||||||||||||||||||
Sbjct: 65 tgccaaaggagaattgccct 84
