miRNEST 2.0, an integrative microRNA resource :: BLAST
>41463_ptc-MIR408:mirbase
Length = 105
Score = 157 bits (79), Expect = 1e-39
Identities = 82/83 (98%)
Strand = Plus / Plus
Query: 1 gacggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctctac 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 14 gacggggaacaggcagagcatggatggagctactaacagaagtacttgttttggctctac 73
Query: 61 ccatgcactgcctcttccctggc 83
|||||||||||||||||||||||
Sbjct: 74 ccatgcactgcctcttccctggc 96
>40391_rco-MIR408:mirbase
Length = 92
Score = 91.7 bits (46), Expect = 7e-20
Identities = 74/81 (91%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 5 gggaacaggcagagcatggatggagctactaacagaagtaca--tgttttggctctaccc 62
|||||||||||| |||||||||| ||||||||||||| ||| ||||||||||||||||
Sbjct: 8 gggaacaggcagtgcatggatggggctactaacagaa-aacatctgttttggctctaccc 66
Query: 63 atgcactgcctcttccctggc 83
||||||||||||||||||||
Sbjct: 67 ctgcactgcctcttccctggc 87
>41252_csi-MIR408:mirbase
Length = 153
Score = 73.8 bits (37), Expect = 2e-14
Identities = 74/84 (88%), Gaps = 3/84 (3%)
Strand = Plus / Plus
Query: 1 gacggggaacaggcagagcatggatggagctactaacagaagtaca-tgttttggctcta 59
|||||||||||||||||||||||||||| | | |||||| || | |||||||||||
Sbjct: 59 gacggggaacaggcagagcatggatggaaccattaacag--gttctctgttttggctcct 116
Query: 60 cccatgcactgcctcttccctggc 83
||||||||||||||||||||||||
Sbjct: 117 cccatgcactgcctcttccctggc 140
>41683_vvi-MIR408:mirbase
Length = 107
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 47 tgttttggctctacccatgcactgcctcttccctggc 83
|||||| ||||||||||||||||||||||||||||||
Sbjct: 61 tgtttttgctctacccatgcactgcctcttccctggc 97
>40108_ath-MIR408:mirbase
Length = 218
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 47 tgttttggctctacccatgcactgcctcttccctggc 83
||||||| |||||||||||||||||||||||||||||
Sbjct: 104 tgttttgtctctacccatgcactgcctcttccctggc 140
>39897_aly-MIR408:mirbase
Length = 211
Score = 65.9 bits (33), Expect = 4e-12
Identities = 36/37 (97%)
Strand = Plus / Plus
Query: 47 tgttttggctctacccatgcactgcctcttccctggc 83
||||||| |||||||||||||||||||||||||||||
Sbjct: 101 tgttttgtctctacccatgcactgcctcttccctggc 137
>41193_aqc-MIR408:mirbase
Length = 87
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 61 ccatgcactgcctcttccctggc 83
|||||||||||||||||||||||
Sbjct: 24 ccatgcactgcctcttccctggc 2
>40405_ahy-MIR408:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 catgcactgcctcttccctggc 83
||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggc 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 gggaacaggcagagcatggatgga 28
|||||||||||||||||| |||||
Sbjct: 23 gggaacaggcagagcatgaatgga 46
>40404_ahy-MIR408:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 catgcactgcctcttccctggc 83
||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggc 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 5 gggaacaggcagagcatggatgga 28
|||||||||||||||||| |||||
Sbjct: 23 gggaacaggcagagcatgaatgga 46
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 catgcactgcctcttccctggc 83
||||||||||||||||||||||
Sbjct: 92 catgcactgcctcttccctggc 113
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 acccatgcactgcctcttccctggc 83
|||| ||||||||||||||||||||
Sbjct: 154 acccctgcactgcctcttccctggc 178
>42465_sof-MIR408d:mirbase
Length = 215
Score = 42.1 bits (21), Expect = 6e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 59 acccatgcactgcctcttccctggc 83
|||| ||||||||||||||||||||
Sbjct: 172 acccctgcactgcctcttccctggc 196
>39742_smo-MIR408:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 63 atgcactgcctcttccctggc 83
|||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggc 96
>39428_pta-MIR408:mirbase
Length = 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 63 atgcactgcctcttccctggc 83
|||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggc 84
>42830_zma-MIR408b:mirbase
Length = 147
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgcactgcctcttccctggc 83
||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggc 145
>42829_zma-MIR408:mirbase
Length = 191
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgcactgcctcttccctggc 83
||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggc 172
>42647_tae-MIR408:mirbase
Length = 187
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgcactgcctcttccctggc 83
||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggc 156
>42600_sbi-MIR408:mirbase
Length = 205
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgcactgcctcttccctggc 83
||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggc 204
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgcactgcctcttccctggc 83
||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggc 246
>42464_sof-MIR408c:mirbase
Length = 286
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgcactgcctcttccctggc 83
||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggc 267
>42463_sof-MIR408b:mirbase
Length = 286
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgcactgcctcttccctggc 83
||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggc 267
>42462_sof-MIR408a:mirbase
Length = 283
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgcactgcctcttccctggc 83
||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggc 264
>42052_osa-MIR408:mirbase
Length = 213
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 64 tgcactgcctcttccctggc 83
||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggc 173
