miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00075;mir-166;EU548911.1/166-263 3702:Arabidopsis thaliana (thale
cress)
Length = 98
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 96 tgtcggaccaggcttcattccc 117
||||||||||||||||||||||
Sbjct: 71 tgtcggaccaggcttcattccc 92
>RF00075;mir-166;EU548905.1/187-287 3702:Arabidopsis thaliana (thale
cress)
Length = 101
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 96 tgtcggaccaggcttcattccc 117
||||||||||||||||||||||
Sbjct: 74 tgtcggaccaggcttcattccc 95
>RF00075;mir-166;AARH01006070.1/215270-215403 3694:Populus
trichocarpa
Length = 134
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 96 tgtcggaccaggcttcattccc 117
||||||||||||||||||||||
Sbjct: 107 tgtcggaccaggcttcattccc 128
>RF00075;mir-166;AARH01000156.1/300448-300294 3694:Populus
trichocarpa
Length = 155
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 96 tgtcggaccaggcttcattccc 117
||||||||||||||||||||||
Sbjct: 128 tgtcggaccaggcttcattccc 149
>RF00075;mir-166;BABK01006649.1/1239-1127 34305:Lotus japonicus
Length = 113
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 96 tgtcggaccaggcttcattccc 117
||||||||||||||||||||||
Sbjct: 86 tgtcggaccaggcttcattccc 107
>RF00075;mir-166;AP009261.1/72240-72093 4081:Solanum lycopersicum
Length = 148
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 96 tgtcggaccaggcttcattccc 117
||||||||||||||||||||||
Sbjct: 121 tgtcggaccaggcttcattccc 142
>RF00075;mir-166;AY599420.1/1-185 4096:Nicotiana sylvestris (wood
tobacco)
Length = 185
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 96 tgtcggaccaggcttcattccc 117
||||||||||||||||||||||
Sbjct: 160 tgtcggaccaggcttcattccc 181
>RF00075;mir-166;AM485267.2/15969-16057 29760:Vitis vinifera
Length = 89
Score = 44.1 bits (22), Expect = 4e-04
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 95 gtgtcggaccaggcttcattcc 116
||||||||||||||||||||||
Sbjct: 61 gtgtcggaccaggcttcattcc 82
