miRNEST 2.0, an integrative microRNA resource :: BLAST
>41463_ptc-MIR408:mirbase
Length = 105
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 agacggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctcta 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 13 agacggggaacaggcagagcatggatggagctactaacagaagtacttgttttggctcta 72
Query: 61 cccatgcactgcctcttccctggct 85
|||||||||||||||||||||||||
Sbjct: 73 cccatgcactgcctcttccctggct 97
>40391_rco-MIR408:mirbase
Length = 92
Score = 95.6 bits (48), Expect = 5e-21
Identities = 79/87 (90%), Gaps = 3/87 (3%)
Strand = Plus / Plus
Query: 1 agacggggaacaggcagagcatggatggagctactaacagaagtaca--tgttttggctc 58
|||| |||||||||||| |||||||||| ||||||||||||| ||| |||||||||||
Sbjct: 3 agactgggaacaggcagtgcatggatggggctactaacagaa-aacatctgttttggctc 61
Query: 59 tacccatgcactgcctcttccctggct 85
||||| |||||||||||||||||||||
Sbjct: 62 tacccctgcactgcctcttccctggct 88
>41252_csi-MIR408:mirbase
Length = 153
Score = 77.8 bits (39), Expect = 1e-15
Identities = 76/86 (88%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 1 agacggggaacaggcagagcatggatggagctactaacagaagtaca-tgttttggctct 59
||||||||||||||||||||||||||||| | | |||||| || | |||||||||||
Sbjct: 58 agacggggaacaggcagagcatggatggaaccattaacag--gttctctgttttggctcc 115
Query: 60 acccatgcactgcctcttccctggct 85
|||||||||||||||||||||||||
Sbjct: 116 tcccatgcactgcctcttccctggct 141
>41683_vvi-MIR408:mirbase
Length = 107
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 48 tgttttggctctacccatgcactgcctcttccctggct 85
|||||| |||||||||||||||||||||||||||||||
Sbjct: 61 tgtttttgctctacccatgcactgcctcttccctggct 98
>40108_ath-MIR408:mirbase
Length = 218
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 48 tgttttggctctacccatgcactgcctcttccctggct 85
||||||| ||||||||||||||||||||||||||||||
Sbjct: 104 tgttttgtctctacccatgcactgcctcttccctggct 141
>39897_aly-MIR408:mirbase
Length = 211
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 48 tgttttggctctacccatgcactgcctcttccctggct 85
||||||| ||||||||||||||||||||||||||||||
Sbjct: 101 tgttttgtctctacccatgcactgcctcttccctggct 138
>41193_aqc-MIR408:mirbase
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 62 ccatgcactgcctcttccctggct 85
||||||||||||||||||||||||
Sbjct: 24 ccatgcactgcctcttccctggct 1
>40405_ahy-MIR408:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 catgcactgcctcttccctggct 85
|||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggct 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 gggaacaggcagagcatggatgga 29
|||||||||||||||||| |||||
Sbjct: 23 gggaacaggcagagcatgaatgga 46
>40404_ahy-MIR408:mirbase
Length = 122
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 catgcactgcctcttccctggct 85
|||||||||||||||||||||||
Sbjct: 80 catgcactgcctcttccctggct 102
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 6 gggaacaggcagagcatggatgga 29
|||||||||||||||||| |||||
Sbjct: 23 gggaacaggcagagcatgaatgga 46
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 catgcactgcctcttccctggct 85
|||||||||||||||||||||||
Sbjct: 92 catgcactgcctcttccctggct 114
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 acccatgcactgcctcttccctggct 85
|||| |||||||||||||||||||||
Sbjct: 154 acccctgcactgcctcttccctggct 179
>42465_sof-MIR408d:mirbase
Length = 215
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 acccatgcactgcctcttccctggct 85
|||| |||||||||||||||||||||
Sbjct: 172 acccctgcactgcctcttccctggct 197
>39742_smo-MIR408:mirbase
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 atgcactgcctcttccctggct 85
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>39428_pta-MIR408:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 atgcactgcctcttccctggct 85
||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggct 85
>42830_zma-MIR408b:mirbase
Length = 147
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgcactgcctcttccctggct 85
|||||||||||||||||||||
Sbjct: 126 tgcactgcctcttccctggct 146
>42829_zma-MIR408:mirbase
Length = 191
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgcactgcctcttccctggct 85
|||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggct 173
>42647_tae-MIR408:mirbase
Length = 187
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgcactgcctcttccctggct 85
|||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggct 157
>42600_sbi-MIR408:mirbase
Length = 205
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgcactgcctcttccctggct 85
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgcactgcctcttccctggct 85
|||||||||||||||||||||
Sbjct: 227 tgcactgcctcttccctggct 247
>42464_sof-MIR408c:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgcactgcctcttccctggct 85
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>42463_sof-MIR408b:mirbase
Length = 286
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgcactgcctcttccctggct 85
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>42462_sof-MIR408a:mirbase
Length = 283
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgcactgcctcttccctggct 85
|||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggct 265
>42052_osa-MIR408:mirbase
Length = 213
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgcactgcctcttccctggct 85
|||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggct 174
