miRNEST 2.0, an integrative microRNA resource :: BLAST
>51762_ptc-miR408:pmrd
Length = 105
Score = 161 bits (81), Expect = 1e-40
Identities = 84/85 (98%)
Strand = Plus / Plus
Query: 1 agacggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctcta 60
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 13 agacggggaacaggcagagcatggatggagctactaacagaagtacttgttttggctcta 72
Query: 61 cccatgcactgcctcttccctggct 85
|||||||||||||||||||||||||
Sbjct: 73 cccatgcactgcctcttccctggct 97
>53677_ptc-miRf11855-akr:pmrd
Length = 79
Score = 149 bits (75), Expect = 4e-37
Identities = 78/79 (98%)
Strand = Plus / Plus
Query: 4 cggggaacaggcagagcatggatggagctactaacagaagtacatgttttggctctaccc 63
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 1 cggggaacaggcagagcatggatggagctactaacagaagtacttgttttggctctaccc 60
Query: 64 atgcactgcctcttccctg 82
|||||||||||||||||||
Sbjct: 61 atgcactgcctcttccctg 79
>54389_rco-miR408:pmrd
Length = 129
Score = 95.6 bits (48), Expect = 5e-21
Identities = 79/87 (90%), Gaps = 3/87 (3%)
Strand = Plus / Plus
Query: 1 agacggggaacaggcagagcatggatggagctactaacagaagtaca--tgttttggctc 58
|||| |||||||||||| |||||||||| ||||||||||||| ||| |||||||||||
Sbjct: 26 agactgggaacaggcagtgcatggatggggctactaacagaa-aacatctgttttggctc 84
Query: 59 tacccatgcactgcctcttccctggct 85
||||| |||||||||||||||||||||
Sbjct: 85 tacccctgcactgcctcttccctggct 111
>48428_cpt-miR408:pmrd
Length = 100
Score = 77.8 bits (39), Expect = 1e-15
Identities = 76/86 (88%), Gaps = 3/86 (3%)
Strand = Plus / Plus
Query: 1 agacggggaacaggcagagcatggatggagctactaacagaagtaca-tgttttggctct 59
||||||||||||||||||||||||||||| | | |||||| || | |||||||||||
Sbjct: 8 agacggggaacaggcagagcatggatggaaccattaacag--gttctctgttttggctcc 65
Query: 60 acccatgcactgcctcttccctggct 85
|||||||||||||||||||||||||
Sbjct: 66 tcccatgcactgcctcttccctggct 91
>54892_vvi-miR408:pmrd
Length = 107
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 48 tgttttggctctacccatgcactgcctcttccctggct 85
|||||| |||||||||||||||||||||||||||||||
Sbjct: 61 tgtttttgctctacccatgcactgcctcttccctggct 98
>48142_ath-miRf11042-akr:pmrd
Length = 99
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 48 tgttttggctctacccatgcactgcctcttccctggct 85
||||||| ||||||||||||||||||||||||||||||
Sbjct: 42 tgttttgtctctacccatgcactgcctcttccctggct 5
>47031_ath-miR408:pmrd
Length = 218
Score = 67.9 bits (34), Expect = 1e-12
Identities = 37/38 (97%)
Strand = Plus / Plus
Query: 48 tgttttggctctacccatgcactgcctcttccctggct 85
||||||| ||||||||||||||||||||||||||||||
Sbjct: 104 tgttttgtctctacccatgcactgcctcttccctggct 141
>51347_ppe-miR408:pmrd
Length = 105
Score = 63.9 bits (32), Expect = 2e-11
Identities = 75/89 (84%), Gaps = 4/89 (4%)
Strand = Plus / Plus
Query: 1 agacggggaacaggcagagcatggatggagctactaacagaagtaca----tgttttggc 56
|||| ||||||||| ||||||||||||||| | | ||||||| | | |||| ||||
Sbjct: 8 agacagggaacaggtagagcatggatggagttcccaacagaaaaatagagctgttgtggc 67
Query: 57 tctacccatgcactgcctcttccctggct 85
||||| |||||||||||||||||||||||
Sbjct: 68 tctactcatgcactgcctcttccctggct 96
>46892_aqc-miR408:pmrd
Length = 87
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 62 ccatgcactgcctcttccctggct 85
||||||||||||||||||||||||
Sbjct: 24 ccatgcactgcctcttccctggct 1
>51397_ppt-miR408b:pmrd
Length = 144
Score = 46.1 bits (23), Expect = 4e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 63 catgcactgcctcttccctggct 85
|||||||||||||||||||||||
Sbjct: 92 catgcactgcctcttccctggct 114
>54649_sof-miR408d:pmrd
Length = 215
Score = 44.1 bits (22), Expect = 2e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 60 acccatgcactgcctcttccctggct 85
|||| |||||||||||||||||||||
Sbjct: 172 acccctgcactgcctcttccctggct 197
>54585_smo-miR408:pmrd
Length = 109
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 atgcactgcctcttccctggct 85
||||||||||||||||||||||
Sbjct: 76 atgcactgcctcttccctggct 97
>51566_pta-miR408:pmrd
Length = 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 64 atgcactgcctcttccctggct 85
||||||||||||||||||||||
Sbjct: 64 atgcactgcctcttccctggct 85
>48317_bdi-miR408:pmrd
Length = 133
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 62 ccatgcactgcctcttccctgg 83
||||||||||||||||||||||
Sbjct: 67 ccatgcactgcctcttccctgg 88
>55104_zma-miR408:pmrd
Length = 191
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgcactgcctcttccctggct 85
|||||||||||||||||||||
Sbjct: 153 tgcactgcctcttccctggct 173
>54690_tae-miR408:pmrd
Length = 187
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgcactgcctcttccctggct 85
|||||||||||||||||||||
Sbjct: 137 tgcactgcctcttccctggct 157
>54648_sof-miR408c:pmrd
Length = 286
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgcactgcctcttccctggct 85
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>54647_sof-miR408b:pmrd
Length = 286
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgcactgcctcttccctggct 85
|||||||||||||||||||||
Sbjct: 248 tgcactgcctcttccctggct 268
>54646_sof-miR408a:pmrd
Length = 283
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgcactgcctcttccctggct 85
|||||||||||||||||||||
Sbjct: 245 tgcactgcctcttccctggct 265
>54499_sbi-miR408:pmrd
Length = 205
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgcactgcctcttccctggct 85
|||||||||||||||||||||
Sbjct: 185 tgcactgcctcttccctggct 205
>48975_osa-miR408:pmrd
Length = 213
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 65 tgcactgcctcttccctggct 85
|||||||||||||||||||||
Sbjct: 154 tgcactgcctcttccctggct 174
