miRNEST 2.0, an integrative microRNA resource :: BLAST
>40338_rco-MIR159:mirbase
Length = 180
Score = 115 bits (58), Expect = 1e-26
Identities = 70/74 (94%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 5 ggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgga 64
Query: 61 taccacagccctat 74
| ||||||||||||
Sbjct: 65 tcccacagccctat 78
Score = 111 bits (56), Expect = 2e-25
Identities = 76/82 (92%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 111 ttggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatcct 170
|||||||||||||||||||||||||||| |||||||||||||||| | |||||||||
Sbjct: 96 ttggataggcttgtggcttgcatatctcaggagcttcattaccttgta---ttagatcct 152
Query: 171 tgtttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 153 tgtttggattgaagggagctct 174
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 97.6 bits (49), Expect = 3e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| |||||||||||||| |||| | ||||||||||||||||||| ||||||
Sbjct: 10 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 69
Query: 61 taccacagccctatccc 77
| |||||||||||||||
Sbjct: 70 tcccacagccctatccc 86
Score = 87.7 bits (44), Expect = 3e-18
Identities = 73/82 (89%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 111 ttggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatcct 170
|||||||||||||||||||||||||||| |||||| ||||| | | | |||||||||
Sbjct: 101 ttggataggcttgtggcttgcatatctcaggagctgcattatccaagt---ttagatcct 157
Query: 171 tgtttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 158 tgtttggattgaagggagctct 179
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 85.7 bits (43), Expect = 1e-17
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 taccacagccctatc 75
| |||||| ||||||
Sbjct: 72 t-ccacagtcctatc 85
Score = 67.9 bits (34), Expect = 3e-12
Identities = 69/80 (86%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 113 ggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatccttg 172
||||||| ||| |||||||||||||| ||||||| ||| ||| || ||||||||| |
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttattgcctaat---gttagatccctt 153
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 85.7 bits (43), Expect = 1e-17
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| |||||||||||| | || ||| |||||||| |||||||||||||||| |
Sbjct: 12 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 71
Query: 61 taccacagccctatc 75
| |||||||||||||
Sbjct: 72 tcccacagccctatc 86
Score = 67.9 bits (34), Expect = 3e-12
Identities = 60/68 (88%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 125 ggcttgcatatctctggagcttcattaccttattatgttagatccttgtttggattgaag 184
|||||||||||||| ||||||| ||||||| || |||||||| || ||||||||||||
Sbjct: 113 ggcttgcatatctcaggagctttattacctaat---gttagatctttttttggattgaag 169
Query: 185 ggagctct 192
||||||||
Sbjct: 170 ggagctct 177
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 85.7 bits (43), Expect = 1e-17
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 taccacagccctatc 75
| |||||| ||||||
Sbjct: 72 t-ccacagtcctatc 85
Score = 67.9 bits (34), Expect = 3e-12
Identities = 69/80 (86%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 113 ggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatccttg 172
||||||| ||| |||||||||||||| ||||||| ||| ||| || ||||||||| |
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttattgcctaat---gttagatccctt 153
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 79.8 bits (40), Expect = 7e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| ||||||||| ||||||||| | |||| |||||||||||| |||||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 taccacag 68
| ||||||
Sbjct: 63 tcccacag 70
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 166 atccttgtttggattgaagggagctct 192
|||||| ||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctct 172
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 79.8 bits (40), Expect = 7e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| ||||||||| ||||||||| | |||| |||||||||||| |||||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 taccacag 68
| ||||||
Sbjct: 63 tcccacag 70
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 166 atccttgtttggattgaagggagctct 192
|||||| ||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctct 172
>40397_ahy-MIR159:mirbase
Length = 197
Score = 79.8 bits (40), Expect = 7e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| |||||||| ||||| ||||| ||||||||||||||||| |||||||||
Sbjct: 4 ggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgga 63
Query: 61 taccacag 68
| ||||||
Sbjct: 64 tcccacag 71
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 164 agatccttgtttggattgaagggagctct 192
|||||||| ||||||||||||||||||||
Sbjct: 148 agatccttatttggattgaagggagctct 176
>41218_csi-MIR159:mirbase
Length = 216
Score = 77.8 bits (39), Expect = 3e-15
Identities = 67/75 (89%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgca-gggtagattgagctgctgagctatgg 59
|||||||||| |||||||| ||||| ||| ||| ||||| ||||||||||||||||||||
Sbjct: 13 ggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatgg 72
Query: 60 ataccacagccctat 74
|| |||||| |||||
Sbjct: 73 atcccacagtcctat 87
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 114 gataggcttgtggcttgcatatctctggagcttcattacc 153
|||||||||||||||||||||| |||||| ||||||||||
Sbjct: 125 gataggcttgtggcttgcatatttctggaccttcattacc 164
>40432_gma-MIR159a:mirbase
Length = 214
Score = 71.9 bits (36), Expect = 2e-13
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| ||||||||| ||||||||| | |||| ||||||||||| |||||||||
Sbjct: 22 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 81
Query: 61 taccacag 68
| ||||||
Sbjct: 82 tcccacag 89
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 168 ccttgtttggattgaagggagctct 192
|||| ||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctct 194
>41528_sly-MIR159:mirbase
Length = 177
Score = 54.0 bits (27), Expect = 4e-08
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| |||||||| | | |||| |||| || ||||||||||||| |||||||
Sbjct: 2 ggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgga 61
Query: 61 taccacagccctatc 75
| || ||||||||||
Sbjct: 62 ttcctcagccctatc 76
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 160 tgttagatccttgtttggattgaagggagctct 192
|||| |||| || ||||||||||||||||||||
Sbjct: 144 tgtttgatcattttttggattgaagggagctct 176
>42700_zma-MIR159k:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tgtttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctct 198
>42699_zma-MIR159j:mirbase
Length = 252
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tgtttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctct 250
>42691_zma-MIR159b:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tgtttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>42634_tae-MIR159a:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tgtttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tgtttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 9 tgtttggattgaagggagctct 30
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tgtttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctct 175
>40435_gma-MIR159d:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 40 attgagctgctgagctatggataccacag 68
||||||||||| |||||||||| ||||||
Sbjct: 7 attgagctgcttagctatggatcccacag 35
