miRNEST 2.0, an integrative microRNA resource :: BLAST
>54777_vvi-miR159c:pmrd
Length = 190
Score = 97.6 bits (49), Expect = 3e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| |||||||||||||| |||| | ||||||||||||||||||| ||||||
Sbjct: 10 ggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgga 69
Query: 61 taccacagccctatccc 77
| |||||||||||||||
Sbjct: 70 tcccacagccctatccc 86
Score = 87.7 bits (44), Expect = 3e-18
Identities = 73/82 (89%), Gaps = 3/82 (3%)
Strand = Plus / Plus
Query: 111 ttggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatcct 170
|||||||||||||||||||||||||||| |||||| ||||| | | | |||||||||
Sbjct: 101 ttggataggcttgtggcttgcatatctcaggagctgcattatccaagt---ttagatcct 157
Query: 171 tgtttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 158 tgtttggattgaagggagctct 179
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 85.7 bits (43), Expect = 1e-17
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||
Sbjct: 7 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 66
Query: 61 taccacagccctatc 75
| |||||| ||||||
Sbjct: 67 t-ccacagtcctatc 80
Score = 67.9 bits (34), Expect = 3e-12
Identities = 69/80 (86%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 113 ggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatccttg 172
||||||| ||| |||||||||||||| ||||||| ||| ||| || ||||||||| |
Sbjct: 92 ggataggtttgcggcttgcatatctcaggagctttattgcctaat---gttagatccctt 148
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctct 168
>51604_ptc-miR159c:pmrd
Length = 183
Score = 85.7 bits (43), Expect = 1e-17
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 taccacagccctatc 75
| |||||| ||||||
Sbjct: 72 t-ccacagtcctatc 85
Score = 67.9 bits (34), Expect = 3e-12
Identities = 69/80 (86%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 113 ggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatccttg 172
||||||| ||| |||||||||||||| ||||||| ||| ||| || ||||||||| |
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttattgcctaat---gttagatccctt 153
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>51603_ptc-miR159b:pmrd
Length = 187
Score = 85.7 bits (43), Expect = 1e-17
Identities = 67/75 (89%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| |||||||||||| | || ||| |||||||| |||||||||||||||| |
Sbjct: 12 ggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatgaa 71
Query: 61 taccacagccctatc 75
| |||||||||||||
Sbjct: 72 tcccacagccctatc 86
Score = 67.9 bits (34), Expect = 3e-12
Identities = 60/68 (88%), Gaps = 3/68 (4%)
Strand = Plus / Plus
Query: 125 ggcttgcatatctctggagcttcattaccttattatgttagatccttgtttggattgaag 184
|||||||||||||| ||||||| ||||||| || |||||||| || ||||||||||||
Sbjct: 113 ggcttgcatatctcaggagctttattacctaat---gttagatctttttttggattgaag 169
Query: 185 ggagctct 192
||||||||
Sbjct: 170 ggagctct 177
>51602_ptc-miR159a:pmrd
Length = 183
Score = 85.7 bits (43), Expect = 1e-17
Identities = 68/75 (90%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| |||||||||||||| |||||| ||||||||| ||||||| |||||||||
Sbjct: 12 ggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgga 71
Query: 61 taccacagccctatc 75
| |||||| ||||||
Sbjct: 72 t-ccacagtcctatc 85
Score = 67.9 bits (34), Expect = 3e-12
Identities = 69/80 (86%), Gaps = 3/80 (3%)
Strand = Plus / Plus
Query: 113 ggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatccttg 172
||||||| ||| |||||||||||||| ||||||| ||| ||| || ||||||||| |
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttattgcctaat---gttagatccctt 153
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctct 173
>54378_pvu-miR159:pmrd
Length = 174
Score = 79.8 bits (40), Expect = 7e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| ||||||||| ||||||||| | |||| |||||||||||| |||||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 taccacag 68
| ||||||
Sbjct: 63 tcccacag 70
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 166 atccttgtttggattgaagggagctct 192
|||||| ||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctct 172
>54377_pvu-miR159:pmrd
Length = 174
Score = 79.8 bits (40), Expect = 7e-16
Identities = 61/68 (89%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| ||||||||| ||||||||| | |||| |||||||||||| |||||||||
Sbjct: 3 ggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgga 62
Query: 61 taccacag 68
| ||||||
Sbjct: 63 tcccacag 70
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 166 atccttgtttggattgaagggagctct 192
|||||| ||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctct 172
>48539_gma-miR159a:pmrd
Length = 214
Score = 71.9 bits (36), Expect = 2e-13
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| ||||||||| ||||||||| | |||| ||||||||||| |||||||||
Sbjct: 22 ggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgga 81
Query: 61 taccacag 68
| ||||||
Sbjct: 82 tcccacag 89
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 168 ccttgtttggattgaagggagctct 192
|||| ||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctct 194
>54540_sly-miR159:pmrd
Length = 177
Score = 54.0 bits (27), Expect = 4e-08
Identities = 63/75 (84%)
Strand = Plus / Plus
Query: 1 ggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgga 60
|||||||||| |||||||| | | |||| |||| || ||||||||||||| |||||||
Sbjct: 2 ggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgga 61
Query: 61 taccacagccctatc 75
| || ||||||||||
Sbjct: 62 ttcctcagccctatc 76
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 160 tgttagatccttgtttggattgaagggagctct 192
|||| |||| || ||||||||||||||||||||
Sbjct: 144 tgtttgatcattttttggattgaagggagctct 176
>54931_zma-miR159b:pmrd
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tgtttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>54673_tae-miR159a:pmrd
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tgtttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>48657_hvv-miR159b:pmrd
Length = 174
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 171 tgtttggattgaagggagctct 192
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>54937_zma-miR159m:pmrd
Length = 457
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54930_zma-miR159a:pmrd
Length = 246
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 207 tttggattgaagggagctct 226
>54674_tae-miR159b:pmrd
Length = 255
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 230 tttggattgaagggagctct 249
>54653_spr-miR159:pmrd
Length = 392
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>54631_sof-miR159d:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 227 tttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 226 tttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 155 tttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 114 gataggcttgtggcttgcat 133
||||||||||||||||||||
Sbjct: 150 gataggcttgtggcttgcat 169
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 206 tttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 229 tttggattgaagggagctct 248
>48820_osa-miR159b:pmrd
Length = 188
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctct 177
>48819_osa-miR159a:pmrd
Length = 272
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>48796_oru-miR159:pmrd
Length = 274
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 242 tttggattgaagggagctct 261
>48701_mtr-miR159c:pmrd
Length = 44
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48699_mtr-miR159a:pmrd
Length = 168
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 148 tttggattgaagggagctct 167
>48686_ltu-miR159:pmrd
Length = 345
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48656_hvv-miR159a:pmrd
Length = 303
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctct 20
>48395_bra-miR159a:pmrd
Length = 185
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
>48339_bna-miR159:pmrd
Length = 183
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctct 180
>46933_ath-miR159c:pmrd
Length = 225
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 172 gtttggattgaagggagctc 191
||||||||||||||||||||
Sbjct: 194 gtttggattgaagggagctc 213
>46932_ath-miR159b:pmrd
Length = 196
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 168 tttggattgaagggagctct 187
>46931_ath-miR159a:pmrd
Length = 184
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 173 tttggattgaagggagctct 192
||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctct 182
