miRNEST 2.0, an integrative microRNA resource :: BLAST
>48395_bra-miR159a:pmrd
Length = 185
Score = 278 bits (140), Expect = 1e-75
Identities = 170/180 (94%)
Strand = Plus / Plus
Query: 1 tagggctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatg 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4 tagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatg 63
Query: 61 gataccataagccctaatccttgtattgaaaaaggacttggtaatatggcttgcatatct 120
|| |||||||||||||||||| ||| |||||||| ||||| ||||||||| |||||||
Sbjct: 64 aatcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatct 123
Query: 121 caggagctttaacttaccctttaattgcttttactcttctttggattgaagggagctcta 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 124 caggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctcta 183
>48339_bna-miR159:pmrd
Length = 183
Score = 278 bits (140), Expect = 1e-75
Identities = 170/180 (94%)
Strand = Plus / Plus
Query: 1 tagggctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatg 60
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2 tagggctccttatagttcaaacgagagtttagcagggtaaagaaaagctgctaagctatg 61
Query: 61 gataccataagccctaatccttgtattgaaaaaggacttggtaatatggcttgcatatct 120
|| |||||||||||||||||| ||| |||||||| ||||| ||||||||| |||||||
Sbjct: 62 aatcccataagccctaatccttatatataaaaaggatttggttatatggcttacatatct 121
Query: 121 caggagctttaacttaccctttaattgcttttactcttctttggattgaagggagctcta 180
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 caggagctttaacttgccctttaattgcttttactcttctttggattgaagggagctcta 181
>46931_ath-miR159a:pmrd
Length = 184
Score = 228 bits (115), Expect = 1e-60
Identities = 163/178 (91%), Gaps = 2/178 (1%)
Strand = Plus / Plus
Query: 5 gctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatggata 64
|||||||| ||||||||| ||||| ||| |||||||||||||||||||||||||||||
Sbjct: 6 gctccttaaagttcaaacatgagttgagcagggtaaagaaaagctgctaagctatggatc 65
Query: 65 ccataagccctaatccttgtattg--aaaaaggacttggtaatatggcttgcatatctca 122
||||||||||||||||||||| | |||||||| ||||| |||||| ||||||||||||
Sbjct: 66 ccataagccctaatccttgtaaagtaaaaaaggatttggttatatggattgcatatctca 125
Query: 123 ggagctttaacttaccctttaattgcttttactcttctttggattgaagggagctcta 180
||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 126 ggagctttaacttgccctttaatggcttttactcttctttggattgaagggagctcta 183
>46932_ath-miR159b:pmrd
Length = 196
Score = 77.8 bits (39), Expect = 3e-15
Identities = 62/67 (92%), Gaps = 2/67 (2%)
Strand = Plus / Plus
Query: 114 catatctcaggagctttaacttaccc-tttaattgcttttactcttctttggattgaagg 172
||||||||||||||||| |||||||| |||||| |||| ||||||||||||||||||||
Sbjct: 122 catatctcaggagctttcacttacccctttaatggcttc-actcttctttggattgaagg 180
Query: 173 gagctct 179
|||||||
Sbjct: 181 gagctct 187
Score = 65.9 bits (33), Expect = 1e-11
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 5 gctccttatagttcaaacgagagtttagcggggtaaagaaaagctgctaagctatggata 64
||||||| ||||||| ||| ||||||| |||| ||| ||||||||||||||||||||
Sbjct: 7 gctccttgaagttcaatggagggtttagcagggtgaagtaaagctgctaagctatggatc 66
Query: 65 ccataagcc 73
|||||||||
Sbjct: 67 ccataagcc 75
>54378_pvu-miR159:pmrd
Length = 174
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 156 cttctttggattgaagggagctcta 180
|||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctcta 173
>54377_pvu-miR159:pmrd
Length = 174
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 156 cttctttggattgaagggagctcta 180
|||||||||||||||||||||||||
Sbjct: 149 cttctttggattgaagggagctcta 173
>48539_gma-miR159a:pmrd
Length = 214
Score = 50.1 bits (25), Expect = 6e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 156 cttctttggattgaagggagctcta 180
|||||||||||||||||||||||||
Sbjct: 171 cttctttggattgaagggagctcta 195
>52093_ptc-miRf10271-akr:pmrd
Length = 174
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 108 ggcttgcatatctcaggagcttta 131
||||||||||||||||||||||||
Sbjct: 104 ggcttgcatatctcaggagcttta 127
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 149 tttggattgaagggagctcta 169
>51604_ptc-miR159c:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 108 ggcttgcatatctcaggagcttta 131
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>51603_ptc-miR159b:pmrd
Length = 187
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 108 ggcttgcatatctcaggagcttta 131
||||||||||||||||||||||||
Sbjct: 113 ggcttgcatatctcaggagcttta 136
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 158 tttggattgaagggagctcta 178
>51602_ptc-miR159a:pmrd
Length = 183
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 108 ggcttgcatatctcaggagcttta 131
||||||||||||||||||||||||
Sbjct: 109 ggcttgcatatctcaggagcttta 132
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>48699_mtr-miR159a:pmrd
Length = 168
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 157 ttctttggattgaagggagctcta 180
||||||||||||||||||||||||
Sbjct: 145 ttctttggattgaagggagctcta 168
>54930_zma-miR159a:pmrd
Length = 246
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 205 tctttggattgaagggagctct 226
>54777_vvi-miR159c:pmrd
Length = 190
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 107 tggcttgcatatctcaggagct 128
||||||||||||||||||||||
Sbjct: 114 tggcttgcatatctcaggagct 135
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 160 tttggattgaagggagctcta 180
>54674_tae-miR159b:pmrd
Length = 255
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 228 tctttggattgaagggagctct 249
>54631_sof-miR159d:pmrd
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>54629_sof-miR159b:pmrd
Length = 266
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 225 tctttggattgaagggagctct 246
>54628_sof-miR159a:pmrd
Length = 265
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 224 tctttggattgaagggagctct 245
>54392_sar-miR159:pmrd
Length = 175
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 153 tctttggattgaagggagctct 174
>51338_pgl-miR159:pmrd
Length = 226
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 204 tctttggattgaagggagctct 225
>48825_osa-miR159m:pmrd
Length = 249
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 227 tctttggattgaagggagctct 248
>48820_osa-miR159b:pmrd
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 156 tctttggattgaagggagctct 177
>48819_osa-miR159a:pmrd
Length = 272
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>48796_oru-miR159:pmrd
Length = 274
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 158 tctttggattgaagggagctct 179
||||||||||||||||||||||
Sbjct: 240 tctttggattgaagggagctct 261
>54540_sly-miR159:pmrd
Length = 177
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 157 tttggattgaagggagctcta 177
Score = 40.1 bits (20), Expect = 6e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 111 ttgcatatctcaggagctttaacttacccttt 142
|||||||| |||||||||||| |||||||||
Sbjct: 113 ttgcatatgtcaggagctttattttacccttt 144
>48701_mtr-miR159c:pmrd
Length = 44
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
>48686_ltu-miR159:pmrd
Length = 345
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 160 tttggattgaagggagctcta 180
|||||||||||||||||||||
Sbjct: 1 tttggattgaagggagctcta 21
