miRNEST 2.0, an integrative microRNA resource :: BLAST
>40338_rco-MIR159:mirbase
Length = 180
Score = 117 bits (59), Expect = 3e-27
Identities = 71/75 (94%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 4 tggagctccttgaagtccaatagaggatcttgatgggtagattgagctgctgagctatgg 63
Query: 61 ataccacagccctat 75
|| ||||||||||||
Sbjct: 64 atcccacagccctat 78
Score = 113 bits (57), Expect = 5e-26
Identities = 77/83 (92%), Gaps = 3/83 (3%)
Strand = Plus / Plus
Query: 112 ttggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatcct 171
|||||||||||||||||||||||||||| |||||||||||||||| | |||||||||
Sbjct: 96 ttggataggcttgtggcttgcatatctcaggagcttcattaccttgta---ttagatcct 152
Query: 172 tgtttggattgaagggagctcta 194
|||||||||||||||||||||||
Sbjct: 153 tgtttggattgaagggagctcta 175
>41572_vvi-MIR159c:mirbase
Length = 190
Score = 99.6 bits (50), Expect = 8e-22
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| |||||||||||||| |||| | ||||||||||||||||||| |||||
Sbjct: 9 tggagctccttgaagtccaatagagggtcttactgggtagattgagctgctgacttatgg 68
Query: 61 ataccacagccctatccc 78
|| |||||||||||||||
Sbjct: 69 atcccacagccctatccc 86
Score = 89.7 bits (45), Expect = 7e-19
Identities = 74/83 (89%), Gaps = 3/83 (3%)
Strand = Plus / Plus
Query: 112 ttggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatcct 171
|||||||||||||||||||||||||||| |||||| ||||| | | | |||||||||
Sbjct: 101 ttggataggcttgtggcttgcatatctcaggagctgcattatccaagt---ttagatcct 157
Query: 172 tgtttggattgaagggagctcta 194
|||||||||||||||||||||||
Sbjct: 158 tgtttggattgaagggagctcta 180
>41301_ptc-MIR159c:mirbase
Length = 183
Score = 87.7 bits (44), Expect = 3e-18
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| |||||||||||||| |||||| ||||||||| ||||||| ||||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 ataccacagccctatc 76
|| |||||| ||||||
Sbjct: 71 at-ccacagtcctatc 85
Score = 69.9 bits (35), Expect = 7e-13
Identities = 70/81 (86%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 114 ggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatccttg 173
||||||| ||| |||||||||||||| ||||||| ||| ||| || ||||||||| |
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttattgcctaat---gttagatccctt 153
Query: 174 tttggattgaagggagctcta 194
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>41300_ptc-MIR159b:mirbase
Length = 187
Score = 87.7 bits (44), Expect = 3e-18
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| |||||||||||| | || ||| |||||||| ||||||||||||||||
Sbjct: 11 tggagctccttgaagtccaatagaagctcctgctgggtagatcgagctgctgagctatga 70
Query: 61 ataccacagccctatc 76
|| |||||||||||||
Sbjct: 71 atcccacagccctatc 86
Score = 69.9 bits (35), Expect = 7e-13
Identities = 61/69 (88%), Gaps = 3/69 (4%)
Strand = Plus / Plus
Query: 126 ggcttgcatatctctggagcttcattaccttattatgttagatccttgtttggattgaag 185
|||||||||||||| ||||||| ||||||| || |||||||| || ||||||||||||
Sbjct: 113 ggcttgcatatctcaggagctttattacctaat---gttagatctttttttggattgaag 169
Query: 186 ggagctcta 194
|||||||||
Sbjct: 170 ggagctcta 178
>41299_ptc-MIR159a:mirbase
Length = 183
Score = 87.7 bits (44), Expect = 3e-18
Identities = 69/76 (90%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| |||||||||||||| |||||| ||||||||| ||||||| ||||||||
Sbjct: 11 tggagctccttgaagtccaatagaggttcttgctgggtagattaagctgctaagctatgg 70
Query: 61 ataccacagccctatc 76
|| |||||| ||||||
Sbjct: 71 at-ccacagtcctatc 85
Score = 69.9 bits (35), Expect = 7e-13
Identities = 70/81 (86%), Gaps = 3/81 (3%)
Strand = Plus / Plus
Query: 114 ggataggcttgtggcttgcatatctctggagcttcattaccttattatgttagatccttg 173
||||||| ||| |||||||||||||| ||||||| ||| ||| || ||||||||| |
Sbjct: 97 ggataggtttgcggcttgcatatctcaggagctttattgcctaat---gttagatccctt 153
Query: 174 tttggattgaagggagctcta 194
|||||||||||||||||||||
Sbjct: 154 tttggattgaagggagctcta 174
>41024_pvu-MIR159a:mirbase
Length = 174
Score = 81.8 bits (41), Expect = 2e-16
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| ||||||||| ||||||||| | |||| |||||||||||| ||||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 ataccacag 69
|| ||||||
Sbjct: 62 atcccacag 70
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 167 atccttgtttggattgaagggagctcta 194
|||||| |||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctcta 173
>41023_pvu-MIR159a:mirbase
Length = 174
Score = 81.8 bits (41), Expect = 2e-16
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| ||||||||| ||||||||| | |||| |||||||||||| ||||||||
Sbjct: 2 tggagctccttgaagtccaattgaggatcttactgggtggattgagctgcttagctatgg 61
Query: 61 ataccacag 69
|| ||||||
Sbjct: 62 atcccacag 70
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 167 atccttgtttggattgaagggagctcta 194
|||||| |||||||||||||||||||||
Sbjct: 146 atccttctttggattgaagggagctcta 173
>40397_ahy-MIR159:mirbase
Length = 197
Score = 81.8 bits (41), Expect = 2e-16
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| |||||||| ||||| ||||| ||||||||||||||||| ||||||||
Sbjct: 3 tggagctccttgaagtccaacagagggtcttggtgggtagattgagctgctaagctatgg 62
Query: 61 ataccacag 69
|| ||||||
Sbjct: 63 atcccacag 71
Score = 52.0 bits (26), Expect = 2e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 165 agatccttgtttggattgaagggagctcta 194
|||||||| |||||||||||||||||||||
Sbjct: 148 agatccttatttggattgaagggagctcta 177
>41218_csi-MIR159:mirbase
Length = 216
Score = 79.8 bits (40), Expect = 7e-16
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgca-gggtagattgagctgctgagctatg 59
||||||||||| |||||||| ||||| ||| ||| ||||| |||||||||||||||||||
Sbjct: 12 tggagctccttgaagtccaaaagaggttctagcaagggtaaattgagctgctgagctatg 71
Query: 60 gataccacagccctat 75
||| |||||| |||||
Sbjct: 72 gatcccacagtcctat 87
Score = 63.9 bits (32), Expect = 4e-11
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 115 gataggcttgtggcttgcatatctctggagcttcattacc 154
|||||||||||||||||||||| |||||| ||||||||||
Sbjct: 125 gataggcttgtggcttgcatatttctggaccttcattacc 164
>40432_gma-MIR159a:mirbase
Length = 214
Score = 73.8 bits (37), Expect = 4e-14
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| ||||||||| ||||||||| | |||| ||||||||||| ||||||||
Sbjct: 21 tggagctccttgaagtccaattgaggatcttactgggtgaattgagctgcttagctatgg 80
Query: 61 ataccacag 69
|| ||||||
Sbjct: 81 atcccacag 89
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 169 ccttgtttggattgaagggagctcta 194
|||| |||||||||||||||||||||
Sbjct: 170 ccttctttggattgaagggagctcta 195
>41528_sly-MIR159:mirbase
Length = 177
Score = 56.0 bits (28), Expect = 1e-08
Identities = 64/76 (84%)
Strand = Plus / Plus
Query: 1 tggagctccttaaagtccaatagaggatcttgcagggtagattgagctgctgagctatgg 60
||||||||||| |||||||| | | |||| |||| || ||||||||||||| ||||||
Sbjct: 1 tggagctccttgaagtccaacaaaaaatctaacaggttaaattgagctgctgacctatgg 60
Query: 61 ataccacagccctatc 76
|| || ||||||||||
Sbjct: 61 attcctcagccctatc 76
Score = 44.1 bits (22), Expect = 4e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 161 tgttagatccttgtttggattgaagggagctcta 194
|||| |||| || |||||||||||||||||||||
Sbjct: 144 tgtttgatcattttttggattgaagggagctcta 177
>42700_zma-MIR159k:mirbase
Length = 200
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tgtttggattgaagggagctct 193
||||||||||||||||||||||
Sbjct: 177 tgtttggattgaagggagctct 198
>42699_zma-MIR159j:mirbase
Length = 252
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tgtttggattgaagggagctct 193
||||||||||||||||||||||
Sbjct: 229 tgtttggattgaagggagctct 250
>42691_zma-MIR159b:mirbase
Length = 221
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tgtttggattgaagggagctct 193
||||||||||||||||||||||
Sbjct: 180 tgtttggattgaagggagctct 201
>42634_tae-MIR159a:mirbase
Length = 177
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tgtttggattgaagggagctct 193
||||||||||||||||||||||
Sbjct: 152 tgtttggattgaagggagctct 173
>41883_hvu-MIR159b:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tgtttggattgaagggagctct 193
||||||||||||||||||||||
Sbjct: 9 tgtttggattgaagggagctct 30
>41882_hvu-MIR159a:mirbase
Length = 178
Score = 44.1 bits (22), Expect = 4e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 172 tgtttggattgaagggagctct 193
||||||||||||||||||||||
Sbjct: 154 tgtttggattgaagggagctct 175
>40657_mtr-MIR159a:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 tttggattgaagggagctcta 194
|||||||||||||||||||||
Sbjct: 152 tttggattgaagggagctcta 172
>40435_gma-MIR159d:mirbase
Length = 103
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 41 attgagctgctgagctatggataccacag 69
||||||||||| |||||||||| ||||||
Sbjct: 7 attgagctgcttagctatggatcccacag 35
>40311_bra-MIR159a:mirbase
Length = 185
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 tttggattgaagggagctcta 194
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>40261_bna-MIR159:mirbase
Length = 183
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 tttggattgaagggagctcta 194
|||||||||||||||||||||
Sbjct: 161 tttggattgaagggagctcta 181
>40016_ath-MIR159a:mirbase
Length = 184
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 tttggattgaagggagctcta 194
|||||||||||||||||||||
Sbjct: 163 tttggattgaagggagctcta 183
>39804_aly-MIR159a:mirbase
Length = 222
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 tttggattgaagggagctcta 194
|||||||||||||||||||||
Sbjct: 183 tttggattgaagggagctcta 203
