miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF01005;MIR530;AC182714.2/17566-17395 3694:Populus trichocarpa
          Length = 172

 Score =  204 bits (103), Expect = 2e-52
 Identities = 128/135 (94%), Gaps = 1/135 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgcatttgcacctgcatcttattgcttttgttttgttcttgactccacaaacaaaatcaa 60
           |||||||||||||||||||| |||| ||||||||||| ||||||||||||||||||||||
Sbjct: 21  tgcatttgcacctgcatctt-ttgcgtttgttttgtttttgactccacaaacaaaatcaa 79

                                                                       
Query: 61  cttctgtcgatacagtatgtggtacaattagctatggaaactcataagcttagttgaggt 120
            ||||||||||||||||||||| |||||||| |||||||||| |||||||||||||||||
Sbjct: 80  gttctgtcgatacagtatgtgggacaattagatatggaaactaataagcttagttgaggt 139

                          
Query: 121 gcaggtgcaagtgca 135
           |||||||||||||||
Sbjct: 140 gcaggtgcaagtgca 154