miRNEST 2.0, an integrative microRNA resource :: BLAST
>54783_vvi-miR160f:pmrd
Length = 102
Score = 135 bits (68), Expect = 5e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggat 60
|||||||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaccggcacatcgatggccttcgtggat 70
Query: 61 ggcgtatgaggagccatgca 80
||||||||||||||||||||
Sbjct: 71 ggcgtatgaggagccatgca 90
>51610_ptc-miR160c:pmrd
Length = 98
Score = 135 bits (68), Expect = 5e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggat 60
|||||||||||||||||||||||||||||||||||||| | ||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaccggttcttcgatggcctccgtggat 70
Query: 61 ggcgtatgaggagccatgca 80
||||||||||||||||||||
Sbjct: 71 ggcgtatgaggagccatgca 90
>51609_ptc-miR160b:pmrd
Length = 98
Score = 135 bits (68), Expect = 5e-33
Identities = 77/80 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggat 60
|||||||||||||||||||||||||||||||||| |||| | ||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccatttgcagagcccaacggatcctcgatggcctccgtggat 70
Query: 61 ggcgtatgaggagccatgca 80
||||||||||||||||||||
Sbjct: 71 ggcgtatgaggagccatgca 90
>47213_ath-miRf10113-akr:pmrd
Length = 85
Score = 103 bits (52), Expect = 2e-23
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggat 60
|||||||||||||||||||||| ||| ||||||| || || ||||||| |||||||||||
Sbjct: 4 tgcctggctccctgtatgccatatgctgagcccatcg-agtatcgatgacctccgtggat 62
Query: 61 ggcgtatgaggagccatgca 80
||||||||||||||||||||
Sbjct: 63 ggcgtatgaggagccatgca 82
>46934_ath-miR160a:pmrd
Length = 85
Score = 103 bits (52), Expect = 2e-23
Identities = 74/80 (92%), Gaps = 1/80 (1%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggat 60
|||||||||||||||||||||| ||| ||||||| || || ||||||| |||||||||||
Sbjct: 4 tgcctggctccctgtatgccatatgctgagcccatcg-agtatcgatgacctccgtggat 62
Query: 61 ggcgtatgaggagccatgca 80
||||||||||||||||||||
Sbjct: 63 ggcgtatgaggagccatgca 82
>48542_gma-miR160a:pmrd
Length = 119
Score = 87.7 bits (44), Expect = 1e-18
Identities = 68/76 (89%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggat 60
||||||||||||||||||||||||| ||||| || || |||||| ||| ||| ||||||
Sbjct: 21 tgcctggctccctgtatgccatttgtagagctcatcgaagcatcaatgacctttgtggat 80
Query: 61 ggcgtatgaggagcca 76
||||||||||||||||
Sbjct: 81 ggcgtatgaggagcca 96
>54781_vvi-miR160d:pmrd
Length = 102
Score = 71.9 bits (36), Expect = 6e-14
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggat 60
||||||||||||||||||||||||||| || ||||| ||| || | | |||| || ||||
Sbjct: 11 tgcctggctccctgtatgccatttgcaaagtccacccgaggattggtagccttcgcggat 70
Query: 61 ggcgtatgaggagccatgca 80
||||| |||||||||||||
Sbjct: 71 ggcgtgcgaggagccatgca 90
>54541_sly-miR160a:pmrd
Length = 129
Score = 58.0 bits (29), Expect = 1e-09
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgcagagcccaccg 37
||||||||||||||||||||||||||| ||| |||||
Sbjct: 20 tgcctggctccctgtatgccatttgcaaagctcaccg 56
>48397_bra-miR160a:pmrd
Length = 127
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 45 gatggcctccgtggatggcgtatgaggagccatgca 80
|||| |||||||| ||||||||||||||||||||||
Sbjct: 69 gatgacctccgtgaatggcgtatgaggagccatgca 104
>48396_bra-miR160a:pmrd
Length = 127
Score = 56.0 bits (28), Expect = 4e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 45 gatggcctccgtggatggcgtatgaggagccatgca 80
|||| |||||||| ||||||||||||||||||||||
Sbjct: 69 gatgacctccgtgaatggcgtatgaggagccatgca 104
>48703_mtr-miR160d:pmrd
Length = 91
Score = 52.0 bits (26), Expect = 6e-08
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgcagag 30
||||||||||||||||||||||||| ||||
Sbjct: 6 tgcctggctccctgtatgccatttgtagag 35
>46865_aqc-miR160b:pmrd
Length = 82
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgc 26
||||||||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgccatttgc 26
Score = 40.1 bits (20), Expect = 2e-04
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 45 gatggcctccgtggatggcgtatgaggagccatgca 80
|||||||| ||||||||||| |||||||||||||
Sbjct: 45 gatggcctttgtggatggcgtgcgaggagccatgca 80
>51615_ptc-miR160h:pmrd
Length = 98
Score = 50.1 bits (25), Expect = 2e-07
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgcagagcccaccggagcatcgatggcctccgtggat 60
|||||||||||||| |||||||||||| ||| || | || | ||| |||||| ||||||
Sbjct: 11 tgcctggctccctgcatgccatttgcatagctcatcagaacgtcggtggccttggtggat 70
Query: 61 ggcgt 65
|||||
Sbjct: 71 ggcgt 75
>54574_smo-miR160a:pmrd
Length = 106
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccat 22
||||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgccat 32
>51363_ppt-miR160e:pmrd
Length = 138
Score = 44.1 bits (22), Expect = 1e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccatttgc 26
||||||||||||||||||||| ||||
Sbjct: 30 tgcctggctccctgtatgccacttgc 55
>48704_mtr-miR160e:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccat 22
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccat 27
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 gtggatggcgtatgaggagcca 76
||||||||||||||||||||||
Sbjct: 60 gtggatggcgtatgaggagcca 81
>48702_mtr-miR160b:pmrd
Length = 91
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgccat 22
||||||||||||||||||||||
Sbjct: 6 tgcctggctccctgtatgccat 27
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 55 gtggatggcgtatgaggagcca 76
||||||||||||||||||||||
Sbjct: 60 gtggatggcgtatgaggagcca 81
>54947_zma-miR160m:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54946_zma-miR160i:pmrd
Length = 81
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 2 tgcctggctccctgtatgcca 22
>54945_zma-miR160h:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54944_zma-miR160g:pmrd
Length = 86
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54942_zma-miR160e:pmrd
Length = 94
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 9 tgcctggctccctgtatgcca 29
>54941_zma-miR160d:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>54940_zma-miR160c:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>54939_zma-miR160b:pmrd
Length = 121
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcca 41
>54938_zma-miR160a:pmrd
Length = 104
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 10 tgcctggctccctgtatgcca 30
>54780_vvi-miR160c:pmrd
Length = 106
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>54759_ttu-miR160a:pmrd
Length = 87
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54675_tae-miR160:pmrd
Length = 148
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 22 tgcctggctccctgtatgcca 42
>54575_smo-miR160b:pmrd
Length = 108
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 13 tgcctggctccctgtatgcca 33
>54408_sbi-miR160e:pmrd
Length = 95
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54407_sbi-miR160d:pmrd
Length = 100
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54406_sbi-miR160c:pmrd
Length = 83
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54405_sbi-miR160b:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>54404_sbi-miR160a:pmrd
Length = 84
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>53874_ptc-miRf12052-akr:pmrd
Length = 110
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 12 tgcctggctccctgtatgcca 32
>51611_ptc-miR160d:pmrd
Length = 103
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51608_ptc-miR160a:pmrd
Length = 102
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51364_ppt-miR160f:pmrd
Length = 138
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>51359_ppt-miR160a:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcca 31
>51334_pga-miR160:pmrd
Length = 80
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48833_osa-miR160n:pmrd
Length = 131
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48832_osa-miR160m:pmrd
Length = 82
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcca 21
>48829_osa-miR160d:pmrd
Length = 142
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 8 tgcctggctccctgtatgcca 28
>48828_osa-miR160c:pmrd
Length = 99
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 7 tgcctggctccctgtatgcca 27
>48827_osa-miR160b:pmrd
Length = 139
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 30 tgcctggctccctgtatgcca 50
>48826_osa-miR160a:pmrd
Length = 88
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>48791_oba-miR160:pmrd
Length = 90
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 4 tgcctggctccctgtatgcca 24
>48658_hvv-miR160a:pmrd
Length = 344
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 324 tgcctggctccctgtatgcca 344
>47338_ath-miRf10238-akr:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>46936_ath-miR160c:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>46935_ath-miR160b:pmrd
Length = 89
Score = 42.1 bits (21), Expect = 6e-05
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcca 21
|||||||||||||||||||||
Sbjct: 5 tgcctggctccctgtatgcca 25
>54943_zma-miR160f:pmrd
Length = 116
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcc 20
||||||||||||||||||||
Sbjct: 21 tgcctggctccctgtatgcc 40
>54760_ttu-miR160b:pmrd
Length = 218
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcc 20
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>54528_sce-miR160:pmrd
Length = 180
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcc 20
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>51367_ppt-miR160i:pmrd
Length = 139
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 gcctggctccctgtatgcca 21
||||||||||||||||||||
Sbjct: 31 gcctggctccctgtatgcca 50
>51360_ppt-miR160b:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 2 gcctggctccctgtatgcca 21
||||||||||||||||||||
Sbjct: 12 gcctggctccctgtatgcca 31
>48830_osa-miR160e:pmrd
Length = 114
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcc 20
||||||||||||||||||||
Sbjct: 11 tgcctggctccctgtatgcc 30
>48659_hvv-miR160b:pmrd
Length = 47
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcc 20
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>48635_gra-miR160b:pmrd
Length = 293
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcc 20
||||||||||||||||||||
Sbjct: 273 tgcctggctccctgtatgcc 292
>48634_gra-miR160a:pmrd
Length = 106
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcc 20
||||||||||||||||||||
Sbjct: 86 tgcctggctccctgtatgcc 105
>48544_gma-miR160o:pmrd
Length = 503
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcc 20
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>48543_gma-miR160n:pmrd
Length = 107
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcc 20
||||||||||||||||||||
Sbjct: 1 tgcctggctccctgtatgcc 20
>48306_bdi-miR160:pmrd
Length = 120
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 tgcctggctccctgtatgcc 20
||||||||||||||||||||
Sbjct: 18 tgcctggctccctgtatgcc 37
