miRNEST 2.0, an integrative microRNA resource :: BLAST
>44941_miR398:micropc
Length = 61
Score = 121 bits (61), Expect = 6e-29
Identities = 61/61 (100%)
Strand = Plus / Plus
Query: 2 aggtgtgacatgagaacacatgatatacttagatattttcacgtgttctcaggtcgcccc 61
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 aggtgtgacatgagaacacatgatatacttagatattttcacgtgttctcaggtcgcccc 60
Query: 62 t 62
|
Sbjct: 61 t 61
>46312_miR398:micropc
Length = 60
Score = 87.7 bits (44), Expect = 8e-19
Identities = 57/60 (95%), Gaps = 1/60 (1%)
Strand = Plus / Plus
Query: 3 ggtgtgacatgagaacacatgatatacttagata-ttttcacgtgttctcaggtcgcccc 61
||||||||||||||||||| ||||||||| |||| |||||||||||||||||||||||||
Sbjct: 1 ggtgtgacatgagaacacacgatatacttcgatatttttcacgtgttctcaggtcgcccc 60
>46367_miR398:micropc
Length = 73
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 41 cacgtgttctcaggtcgcccctg 63
|||||||||||||||||||||||
Sbjct: 51 cacgtgttctcaggtcgcccctg 73
>45087_miR398:micropc
Length = 84
Score = 46.1 bits (23), Expect = 3e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 41 cacgtgttctcaggtcgcccctg 63
|||||||||||||||||||||||
Sbjct: 62 cacgtgttctcaggtcgcccctg 84
>45384_miR398:micropc
Length = 83
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 41 cacgtgttctcaggtcgcccct 62
||||||||||||||||||||||
Sbjct: 62 cacgtgttctcaggtcgcccct 83
>45163_miR398:micropc
Length = 71
Score = 44.1 bits (22), Expect = 1e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 41 cacgtgttctcaggtcgcccct 62
||||||||||||||||||||||
Sbjct: 50 cacgtgttctcaggtcgcccct 71
>45294_miR398:micropc
Length = 98
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 39 ttcacgtgttctcaggtcgcccctg 63
|||| ||||||||||||||||||||
Sbjct: 74 ttcatgtgttctcaggtcgcccctg 98
>46795_miR398:micropc
Length = 101
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccctg 63
||||||||||||||||||||
Sbjct: 82 gtgttctcaggtcgcccctg 101
>46725_miR398:micropc
Length = 67
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccctg 63
||||||||||||||||||||
Sbjct: 48 gtgttctcaggtcgcccctg 67
>46686_miR398:micropc
Length = 96
Score = 40.1 bits (20), Expect = 2e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 39 ttcacgtgttctcaggtcgcccct 62
|||| |||||||||||||||||||
Sbjct: 73 ttcatgtgttctcaggtcgcccct 96
>46604_miR398:micropc
Length = 67
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccctg 63
||||||||||||||||||||
Sbjct: 48 gtgttctcaggtcgcccctg 67
>46392_miR398:micropc
Length = 68
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccctg 63
||||||||||||||||||||
Sbjct: 49 gtgttctcaggtcgcccctg 68
>46371_miR398:micropc
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccctg 63
||||||||||||||||||||
Sbjct: 58 gtgttctcaggtcgcccctg 77
>46116_miR398:micropc
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccctg 63
||||||||||||||||||||
Sbjct: 58 gtgttctcaggtcgcccctg 77
>46034_miR398:micropc
Length = 77
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccctg 63
||||||||||||||||||||
Sbjct: 58 gtgttctcaggtcgcccctg 77
>45519_miR398:micropc
Length = 61
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccctg 63
||||||||||||||||||||
Sbjct: 42 gtgttctcaggtcgcccctg 61
>45422_miR398:micropc
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccctg 63
||||||||||||||||||||
Sbjct: 59 gtgttctcaggtcgcccctg 78
>44891_miR398:micropc
Length = 89
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccctg 63
||||||||||||||||||||
Sbjct: 70 gtgttctcaggtcgcccctg 89
>46690_miR398:micropc
Length = 75
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccct 62
|||||||||||||||||||
Sbjct: 57 gtgttctcaggtcgcccct 75
>46550_miR398:micropc
Length = 61
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 45 tgttctcaggtcgcccctg 63
|||||||||||||||||||
Sbjct: 43 tgttctcaggtcgcccctg 61
>46304_miR398:micropc
Length = 59
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccct 62
|||||||||||||||||||
Sbjct: 41 gtgttctcaggtcgcccct 59
>46303_miR398:micropc
Length = 75
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccct 62
|||||||||||||||||||
Sbjct: 57 gtgttctcaggtcgcccct 75
>46124_miR398:micropc
Length = 97
Score = 38.2 bits (19), Expect = 7e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 37 ttttcacgtgttctcaggtcgcccctg 63
|||||| ||||||||||||| ||||||
Sbjct: 71 ttttcatgtgttctcaggtcacccctg 97
>46114_miR398:micropc
Length = 65
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccct 62
|||||||||||||||||||
Sbjct: 47 gtgttctcaggtcgcccct 65
>46111_miR398:micropc
Length = 76
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccct 62
|||||||||||||||||||
Sbjct: 58 gtgttctcaggtcgcccct 76
>46074_miR398:micropc
Length = 75
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccct 62
|||||||||||||||||||
Sbjct: 57 gtgttctcaggtcgcccct 75
>45898_miR398:micropc
Length = 66
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccct 62
|||||||||||||||||||
Sbjct: 48 gtgttctcaggtcgcccct 66
>45694_miR398:micropc
Length = 99
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccct 62
|||||||||||||||||||
Sbjct: 81 gtgttctcaggtcgcccct 99
>45192_miR398:micropc
Length = 65
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccct 62
|||||||||||||||||||
Sbjct: 47 gtgttctcaggtcgcccct 65
>45095_miR398:micropc
Length = 87
Score = 38.2 bits (19), Expect = 7e-04
Identities = 19/19 (100%)
Strand = Plus / Plus
Query: 44 gtgttctcaggtcgcccct 62
|||||||||||||||||||
Sbjct: 69 gtgttctcaggtcgcccct 87
