miRNEST 2.0, an integrative microRNA resource

miRNEST 2.0, an integrative microRNA resource :: BLAST

BLASTN 2.2.20 [Feb-08-2009]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.
>RF00695;MIR398;AASG02014986.1/899-1036 3988:Ricinus communis
           (castor bean)
          Length = 138

 Score = 44.1 bits (22), Expect = 2e-04
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 38  tttcacgtgttctcaggtcgcccctg 63
           ||||| ||||||||||||||||||||
Sbjct: 103 tttcatgtgttctcaggtcgcccctg 128

>RF00695;MIR398;AARH01000462.1/173558-173473 3694:Populus
          trichocarpa
          Length = 86

 Score = 42.1 bits (21), Expect = 8e-04
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                   
Query: 39 ttcacgtgttctcaggtcgcccctg 63
          |||| ||||||||||||||||||||
Sbjct: 52 ttcatgtgttctcaggtcgcccctg 76