miRNEST 2.0, an integrative microRNA resource :: BLAST
>40367_rco-MIR319a:mirbase
Length = 211
Score = 121 bits (61), Expect = 2e-28
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 122 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 181
|||||| ||||||||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 133 cagtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtacttggact 192
Query: 182 gaagggagctccc 194
|||||||||||||
Sbjct: 193 gaagggagctccc 205
Score = 101 bits (51), Expect = 2e-22
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 1 gagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcatt 60
||||||||||||||||||| |||||||||| |||||||| |||||||| ||||||||||
Sbjct: 5 gagagctttcttcagtccactcatgggtggcggtaggatttaattagctgccgactcatt 64
Query: 61 catccaaatgctgag 75
||||||||| |||||
Sbjct: 65 catccaaatactgag 79
>41404_ptc-MIR319a:mirbase
Length = 188
Score = 113 bits (57), Expect = 5e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 122 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 181
|||||| ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 107 cagtaaatgagtgaatgatgcgggagacaaattgaatcctaagcttcctgtacttggact 166
Query: 182 gaagggagctccc 194
|||||||||||||
Sbjct: 167 gaagggagctccc 179
Score = 101 bits (51), Expect = 2e-22
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 1 gagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcatt 60
||||||||||||||||||| ||||||||| ||||||||| |||||||| ||||||||||
Sbjct: 11 gagagctttcttcagtccactcatgggtggtagtaggatttaattagctgccgactcatt 70
Query: 61 catccaaatgctgag 75
||||||||| |||||
Sbjct: 71 catccaaatactgag 85
>41282_ctr-MIR319:mirbase
Length = 186
Score = 113 bits (57), Expect = 5e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 122 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 181
|||||| ||||||||||||||||||||||| ||| |||||||||||||||| ||||||||
Sbjct: 104 cagtaaatgagtgaatgatgcgggagacaaattgaatcttaagcttcctgtgcttggact 163
Query: 182 gaagggagctccc 194
|||||||||||||
Sbjct: 164 gaagggagctccc 176
Score = 69.9 bits (35), Expect = 7e-13
Identities = 59/67 (88%)
Strand = Plus / Plus
Query: 3 gagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcattca 62
||||||||||| ||||| |||||||||| ||||||| |||||||| | ||||||||||
Sbjct: 10 gagctttcttcggtccacttatgggtggcaataggatttaattagctgctgactcattca 69
Query: 63 tccaaat 69
|||||||
Sbjct: 70 tccaaat 76
>40464_gma-MIR319a:mirbase
Length = 207
Score = 107 bits (54), Expect = 3e-24
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 129 tgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggactgaaggga 188
||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||
Sbjct: 123 tgagtgaatgatgcgggagacaaattgaatcttaagtttcctgtacttggactgaaggga 182
Query: 189 gctccc 194
||||||
Sbjct: 183 gctccc 188
Score = 101 bits (51), Expect = 2e-22
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 1 gagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcatt 60
||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||
Sbjct: 21 gagagctttcttcagtccactcatgggtgacagtaagattcaattagctgccgactcatt 80
Query: 61 catccaaatgctgag 75
|||||||||| ||||
Sbjct: 81 catccaaatgttgag 95
>41636_vvi-MIR319c:mirbase
Length = 182
Score = 105 bits (53), Expect = 1e-23
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 gagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcatt 60
||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||
Sbjct: 11 gagagctttcttcagtccactcatgggtggcagtaggattgaattagctgccgactcatt 70
Query: 61 catccaaat 69
|||||||||
Sbjct: 71 catccaaat 79
Score = 105 bits (53), Expect = 1e-23
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 122 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 181
|||||| ||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 98 cagtaaatgattgaatgatgcgggagacaaattggatcttaagctccctgtgcttggact 157
Query: 182 gaagggagctccc 194
|||||||||||||
Sbjct: 158 gaagggagctccc 170
>40465_gma-MIR319b:mirbase
Length = 208
Score = 101 bits (51), Expect = 2e-22
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 120 ctcagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttgga 179
||||| || ||||||||||||||||||||||| ||| ||||||| ||||||||||||||
Sbjct: 115 ctcagcaaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttgga 174
Query: 180 ctgaagggagctccc 194
|||||||||||||||
Sbjct: 175 ctgaagggagctccc 189
Score = 79.8 bits (40), Expect = 7e-16
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gagagctttcttcagtccaaacatgggtggcagtaggatt-caattagcttccgactcat 59
||||||||||||||||||| ||||||| || || |||| ||||||||| |||||||||
Sbjct: 21 gagagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgactcat 80
Query: 60 tcatccaaatgctgag 75
||||||||||||||||
Sbjct: 81 tcatccaaatgctgag 96
>40704_mtr-MIR319b:mirbase
Length = 180
Score = 99.6 bits (50), Expect = 8e-22
Identities = 62/66 (93%)
Strand = Plus / Plus
Query: 129 tgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggactgaaggga 188
||||||||||||||||||||||| ||| |||||||| ||||| |||||||||||||||||
Sbjct: 110 tgagtgaatgatgcgggagacaaattgaatcttaagtttcctatacttggactgaaggga 169
Query: 189 gctccc 194
||||||
Sbjct: 170 gctccc 175
Score = 63.9 bits (32), Expect = 4e-11
Identities = 66/76 (86%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gagagctttcttcagtccaaacatgggtggcagtaggatt-caattagcttccgactcat 59
|||||||||||| |||||| |||||||| || || |||| ||||||||| | |||||||
Sbjct: 4 gagagctttctttagtccactcatgggtgacaataagatttcaattagctgctgactcat 63
Query: 60 tcatccaaatgctgag 75
||||||||||| ||||
Sbjct: 64 tcatccaaatgttgag 79
>41544_sly-MIR319:mirbase
Length = 168
Score = 93.7 bits (47), Expect = 5e-20
Identities = 69/75 (92%), Gaps = 1/75 (1%)
Strand = Plus / Plus
Query: 120 ctcagtaactgagtgaatgatgcgggag-acaagttggatcttaagcttcctgtacttgg 178
||||| |||||||||||||| ||||||| |||||||| |||| ||||||||||||||||
Sbjct: 94 ctcagcaactgagtgaatgaagcgggagtacaagttgagtcttgagcttcctgtacttgg 153
Query: 179 actgaagggagctcc 193
|||||||||||||||
Sbjct: 154 actgaagggagctcc 168
Score = 52.0 bits (26), Expect = 2e-07
Identities = 38/42 (90%)
Strand = Plus / Plus
Query: 34 taggattcaattagcttccgactcattcatccaaatgctgag 75
|||| ||||||| ||| |||||||||||||||||||| ||||
Sbjct: 31 tagggttcaatttgctgccgactcattcatccaaatgttgag 72
>41185_aqc-MIR319:mirbase
Length = 177
Score = 77.8 bits (39), Expect = 3e-15
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 124 gtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggactga 183
|||| ||| |||||||| ||||||| | |||||||||| ||||| ||||||||||||||
Sbjct: 104 gtaaatgaatgaatgatccgggagattaattggatcttatgcttcttgtacttggactga 163
Query: 184 agggagctccc 194
|||||||||||
Sbjct: 164 agggagctccc 174
Score = 52.0 bits (26), Expect = 2e-07
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 1 gagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcatt 60
||||||| ||||||||||| ||| ||| | ||| ||||||||| ||| ||||||||||
Sbjct: 2 gagagctctcttcagtccactcataggtagtagtcagattcaatttgctgccgactcatt 61
Query: 61 catcca 66
||||||
Sbjct: 62 catcca 67
>41405_ptc-MIR319b:mirbase
Length = 185
Score = 65.9 bits (33), Expect = 1e-11
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 122 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 181
|||||| ||| ||| ||||||||||||||| || ||||||| |||||| | |||||||
Sbjct: 104 cagtaaatgaatgagtgatgcgggagacaaattaaatcttaaacttcctatcattggact 163
Query: 182 gaagggagctccc 194
|||||||||||||
Sbjct: 164 gaagggagctccc 176
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 37 gattcaattagcttccgactcattcatccaaatgctgag 75
|||| |||||| | ||||||||||||||||||| |||||
Sbjct: 47 gatttaattagttaccgactcattcatccaaatactgag 85
>40069_ath-MIR319a:mirbase
Length = 176
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 37 gattcaattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||||||
Sbjct: 40 gattcaattagcttccgactcattcatccaaat 72
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 154 ttggactgaagggagctccc 173
>39858_aly-MIR319a:mirbase
Length = 221
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 41 caattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||
Sbjct: 67 caattagcttccgactcattcatccaaat 95
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 177 ttggactgaagggagctccc 196
>41638_vvi-MIR319f:mirbase
Length = 193
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 169 ctgtacttggactgaagggagctccc 194
|||| |||||||||||||||||||||
Sbjct: 156 ctgtgcttggactgaagggagctccc 181
>41407_ptc-MIR319d:mirbase
Length = 193
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 169 ctgtacttggactgaagggagctccc 194
|||| |||||||||||||||||||||
Sbjct: 159 ctgtgcttggactgaagggagctccc 184
>41406_ptc-MIR319c:mirbase
Length = 196
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 169 ctgtacttggactgaagggagctccc 194
|||| |||||||||||||||||||||
Sbjct: 162 ctgtgcttggactgaagggagctccc 187
>40369_rco-MIR319c:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 169 ctgtacttggactgaagggagctccc 194
|||| |||||||||||||||||||||
Sbjct: 157 ctgtgcttggactgaagggagctccc 182
>42642_tae-MIR319:mirbase
Length = 211
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 183 cttggactgaagggagctccc 203
>41770_bdi-MIR319:mirbase
Length = 280
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 225 cttggactgaagggagctccc 245
>41635_vvi-MIR319b:mirbase
Length = 194
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctccc 182
>41410_ptc-MIR319g:mirbase
Length = 204
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 169 ctgtacttggactgaagggagctcc 193
|||| ||||||||||||||||||||
Sbjct: 170 ctgtgcttggactgaagggagctcc 194
>41409_ptc-MIR319f:mirbase
Length = 202
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 169 ctgtacttggactgaagggagctcc 193
|||| ||||||||||||||||||||
Sbjct: 168 ctgtgcttggactgaagggagctcc 192
>40703_mtr-MIR319:mirbase
Length = 207
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 168 cttggactgaagggagctccc 188
>40368_rco-MIR319b:mirbase
Length = 179
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 153 cttggactgaagggagctccc 173
>40070_ath-MIR319b:mirbase
Length = 172
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 151 cttggactgaagggagctccc 171
>39859_aly-MIR319b:mirbase
Length = 246
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 190 cttggactgaagggagctccc 210
>39740_smo-MIR319:mirbase
Length = 215
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccc 205
>39484_ppt-MIR319e:mirbase
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>39483_ppt-MIR319d:mirbase
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>39482_ppt-MIR319c:mirbase
Length = 189
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174
>41639_vvi-MIR319g:mirbase
Length = 222
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211
>41026_pvu-MIR319c:mirbase
Length = 734
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 409 cttggactgaagggagctcc 428
>39481_ppt-MIR319b:mirbase
Length = 160
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>39480_ppt-MIR319a:mirbase
Length = 169
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
