miRNEST 2.0, an integrative microRNA resource :: BLAST
>51707_ptc-miR319a:pmrd
Length = 188
Score = 113 bits (57), Expect = 5e-26
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 122 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 181
|||||| ||||||||||||||||||||||| ||| ||| |||||||||||||||||||||
Sbjct: 107 cagtaaatgagtgaatgatgcgggagacaaattgaatcctaagcttcctgtacttggact 166
Query: 182 gaagggagctccc 194
|||||||||||||
Sbjct: 167 gaagggagctccc 179
Score = 101 bits (51), Expect = 2e-22
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 1 gagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcatt 60
||||||||||||||||||| ||||||||| ||||||||| |||||||| ||||||||||
Sbjct: 11 gagagctttcttcagtccactcatgggtggtagtaggatttaattagctgccgactcatt 70
Query: 61 catccaaatgctgag 75
||||||||| |||||
Sbjct: 71 catccaaatactgag 85
>48572_gma-miR319a:pmrd
Length = 207
Score = 107 bits (54), Expect = 3e-24
Identities = 63/66 (95%)
Strand = Plus / Plus
Query: 129 tgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggactgaaggga 188
||||||||||||||||||||||| ||| |||||||| |||||||||||||||||||||||
Sbjct: 123 tgagtgaatgatgcgggagacaaattgaatcttaagtttcctgtacttggactgaaggga 182
Query: 189 gctccc 194
||||||
Sbjct: 183 gctccc 188
Score = 101 bits (51), Expect = 2e-22
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 1 gagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcatt 60
||||||||||||||||||| |||||||| ||||| ||||||||||||| ||||||||||
Sbjct: 21 gagagctttcttcagtccactcatgggtgacagtaagattcaattagctgccgactcatt 80
Query: 61 catccaaatgctgag 75
|||||||||| ||||
Sbjct: 81 catccaaatgttgag 95
>54844_vvi-miR319c:pmrd
Length = 182
Score = 105 bits (53), Expect = 1e-23
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 1 gagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcatt 60
||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||||
Sbjct: 11 gagagctttcttcagtccactcatgggtggcagtaggattgaattagctgccgactcatt 70
Query: 61 catccaaat 69
|||||||||
Sbjct: 71 catccaaat 79
Score = 105 bits (53), Expect = 1e-23
Identities = 68/73 (93%)
Strand = Plus / Plus
Query: 122 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 181
|||||| ||| ||||||||||||||||||| |||||||||||||| ||||| ||||||||
Sbjct: 98 cagtaaatgattgaatgatgcgggagacaaattggatcttaagctccctgtgcttggact 157
Query: 182 gaagggagctccc 194
|||||||||||||
Sbjct: 158 gaagggagctccc 170
>48573_gma-miR319b:pmrd
Length = 208
Score = 101 bits (51), Expect = 2e-22
Identities = 69/75 (92%)
Strand = Plus / Plus
Query: 120 ctcagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttgga 179
||||| || ||||||||||||||||||||||| ||| ||||||| ||||||||||||||
Sbjct: 115 ctcagcaaatgagtgaatgatgcgggagacaaattgattcttaagtttcctgtacttgga 174
Query: 180 ctgaagggagctccc 194
|||||||||||||||
Sbjct: 175 ctgaagggagctccc 189
Score = 79.8 bits (40), Expect = 7e-16
Identities = 68/76 (89%), Gaps = 1/76 (1%)
Strand = Plus / Plus
Query: 1 gagagctttcttcagtccaaacatgggtggcagtaggatt-caattagcttccgactcat 59
||||||||||||||||||| ||||||| || || |||| ||||||||| |||||||||
Sbjct: 21 gagagctttcttcagtccacttatgggtgacaataagatttcaattagctgccgactcat 80
Query: 60 tcatccaaatgctgag 75
||||||||||||||||
Sbjct: 81 tcatccaaatgctgag 96
>46884_aqc-miR319:pmrd
Length = 177
Score = 77.8 bits (39), Expect = 3e-15
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 124 gtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggactga 183
|||| ||| |||||||| ||||||| | |||||||||| ||||| ||||||||||||||
Sbjct: 104 gtaaatgaatgaatgatccgggagattaattggatcttatgcttcttgtacttggactga 163
Query: 184 agggagctccc 194
|||||||||||
Sbjct: 164 agggagctccc 174
Score = 52.0 bits (26), Expect = 2e-07
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 1 gagagctttcttcagtccaaacatgggtggcagtaggattcaattagcttccgactcatt 60
||||||| ||||||||||| ||| ||| | ||| ||||||||| ||| ||||||||||
Sbjct: 2 gagagctctcttcagtccactcataggtagtagtcagattcaatttgctgccgactcatt 61
Query: 61 catcca 66
||||||
Sbjct: 62 catcca 67
>54391_rin-miR159:pmrd
Length = 192
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 37 gattcaattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||||||
Sbjct: 47 gattcaattagcttccgactcattcatccaaat 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccc 180
>51708_ptc-miR319b:pmrd
Length = 185
Score = 65.9 bits (33), Expect = 1e-11
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 122 cagtaactgagtgaatgatgcgggagacaagttggatcttaagcttcctgtacttggact 181
|||||| ||| ||| ||||||||||||||| || ||||||| |||||| | |||||||
Sbjct: 104 cagtaaatgaatgagtgatgcgggagacaaattaaatcttaaacttcctatcattggact 163
Query: 182 gaagggagctccc 194
|||||||||||||
Sbjct: 164 gaagggagctccc 176
Score = 46.1 bits (23), Expect = 1e-05
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 37 gattcaattagcttccgactcattcatccaaatgctgag 75
|||| |||||| | ||||||||||||||||||| |||||
Sbjct: 47 gatttaattagttaccgactcattcatccaaatactgag 85
>47656_ath-miRf10556-akr:pmrd
Length = 203
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 37 gattcaattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||||||
Sbjct: 151 gattcaattagcttccgactcattcatccaaat 119
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 37 ttggactgaagggagctccc 18
>46992_ath-miR319a:pmrd
Length = 176
Score = 65.9 bits (33), Expect = 1e-11
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 37 gattcaattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||||||
Sbjct: 40 gattcaattagcttccgactcattcatccaaat 72
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 154 ttggactgaagggagctccc 173
>54754_tar-miR159:pmrd
Length = 192
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 41 caattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||
Sbjct: 51 caattagcttccgactcattcatccaaat 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccc 180
>54670_svi-miR159:pmrd
Length = 191
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 41 caattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||
Sbjct: 51 caattagcttccgactcattcatccaaat 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccc 180
>48694_mma-miR159:pmrd
Length = 192
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 41 caattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||
Sbjct: 51 caattagcttccgactcattcatccaaat 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccc 180
>48479_fal-miR159:pmrd
Length = 192
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 41 caattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||
Sbjct: 51 caattagcttccgactcattcatccaaat 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccc 180
>48478_ech-miR159:pmrd
Length = 192
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 41 caattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||
Sbjct: 51 caattagcttccgactcattcatccaaat 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccc 180
>48429_crb-miR159:pmrd
Length = 194
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 41 caattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||
Sbjct: 51 caattagcttccgactcattcatccaaat 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 163 ttggactgaagggagctccc 182
>48422_cor-miR159:pmrd
Length = 193
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 41 caattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||
Sbjct: 51 caattagcttccgactcattcatccaaat 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 162 ttggactgaagggagctccc 181
>48421_cmi-miR159:pmrd
Length = 193
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 41 caattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||
Sbjct: 51 caattagcttccgactcattcatccaaat 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 162 ttggactgaagggagctccc 181
>48415_bvl-miR159:pmrd
Length = 192
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 41 caattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||
Sbjct: 51 caattagcttccgactcattcatccaaat 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccc 180
>46860_ape-miR159:pmrd
Length = 192
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 41 caattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||
Sbjct: 51 caattagcttccgactcattcatccaaat 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccc 180
>46856_ahi-miR159:pmrd
Length = 192
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 41 caattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||
Sbjct: 51 caattagcttccgactcattcatccaaat 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccc 180
>46855_aha-miR159:pmrd
Length = 192
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 41 caattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||
Sbjct: 51 caattagcttccgactcattcatccaaat 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccc 180
>46846_acb-miR159:pmrd
Length = 191
Score = 58.0 bits (29), Expect = 3e-09
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 41 caattagcttccgactcattcatccaaat 69
|||||||||||||||||||||||||||||
Sbjct: 50 caattagcttccgactcattcatccaaat 78
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 160 ttggactgaagggagctccc 179
>48476_dso-miR159:pmrd
Length = 192
Score = 52.0 bits (26), Expect = 2e-07
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 41 caattagcttccgactcattcatcca 66
||||||||||||||||||||||||||
Sbjct: 51 caattagcttccgactcattcatcca 76
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccc 180
>48788_nof-miR159:pmrd
Length = 192
Score = 50.1 bits (25), Expect = 6e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 41 caattagcttccgactcattcatccaaat 69
||||||||||||||||||||||| |||||
Sbjct: 51 caattagcttccgactcattcatacaaat 79
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 161 ttggactgaagggagctccc 180
>54846_vvi-miR319f:pmrd
Length = 193
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 169 ctgtacttggactgaagggagctccc 194
|||| |||||||||||||||||||||
Sbjct: 156 ctgtgcttggactgaagggagctccc 181
>51710_ptc-miR319d:pmrd
Length = 193
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 169 ctgtacttggactgaagggagctccc 194
|||| |||||||||||||||||||||
Sbjct: 159 ctgtgcttggactgaagggagctccc 184
>51709_ptc-miR319c:pmrd
Length = 196
Score = 44.1 bits (22), Expect = 4e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 169 ctgtacttggactgaagggagctccc 194
|||| |||||||||||||||||||||
Sbjct: 162 ctgtgcttggactgaagggagctccc 187
>54843_vvi-miR319b:pmrd
Length = 194
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 162 cttggactgaagggagctccc 182
>54686_tae-miR319a:pmrd
Length = 196
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 176 cttggactgaagggagctccc 196
>54583_smo-miR319:pmrd
Length = 215
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 185 cttggactgaagggagctccc 205
>51713_ptc-miR319g:pmrd
Length = 204
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 169 ctgtacttggactgaagggagctcc 193
|||| ||||||||||||||||||||
Sbjct: 170 ctgtgcttggactgaagggagctcc 194
>51712_ptc-miR319f:pmrd
Length = 202
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 169 ctgtacttggactgaagggagctcc 193
|||| ||||||||||||||||||||
Sbjct: 168 ctgtgcttggactgaagggagctcc 192
>51390_ppt-miR319e:pmrd
Length = 174
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>51389_ppt-miR319d:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>51388_ppt-miR319d:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>51387_ppt-miR319d:pmrd
Length = 170
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 145 cttggactgaagggagctccc 165
>51386_ppt-miR319c:pmrd
Length = 189
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 154 cttggactgaagggagctccc 174
>51351_ppl-miR319:pmrd
Length = 204
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 169 ctgtacttggactgaagggagctcc 193
|||| ||||||||||||||||||||
Sbjct: 168 ctgtgcttggactgaagggagctcc 192
Score = 40.1 bits (20), Expect = 6e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 36 ggattcaattagcttccgactcattcat 63
||||| |||||||| |||||||||||||
Sbjct: 48 ggattgaattagctgccgactcattcat 75
>48687_ltu-miR319:pmrd
Length = 167
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 147 cttggactgaagggagctccc 167
>46993_ath-miR319b:pmrd
Length = 172
Score = 42.1 bits (21), Expect = 2e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctccc 194
|||||||||||||||||||||
Sbjct: 151 cttggactgaagggagctccc 171
>54847_vvi-miR319g:pmrd
Length = 222
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 175 ttggactgaagggagctccc 194
||||||||||||||||||||
Sbjct: 192 ttggactgaagggagctccc 211
>54380_pvu-miR319c:pmrd
Length = 734
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 409 cttggactgaagggagctcc 428
>52451_ptc-miRf10629-akr:pmrd
Length = 170
Score = 40.1 bits (20), Expect = 6e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 169 ctgtacttggactgaagggagctc 192
|||| |||||||||||||||||||
Sbjct: 147 ctgtgcttggactgaagggagctc 170
>51385_ppt-miR319b:pmrd
Length = 160
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 140 cttggactgaagggagctcc 159
>51384_ppt-miR319a:pmrd
Length = 169
Score = 40.1 bits (20), Expect = 6e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 174 cttggactgaagggagctcc 193
||||||||||||||||||||
Sbjct: 148 cttggactgaagggagctcc 167
