miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45761_miR157:micropc
Length = 83
Score = 153 bits (77), Expect = 2e-38
Identities = 77/77 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 63
Query: 61 tgctctctattcttctg 77
|||||||||||||||||
Sbjct: 64 tgctctctattcttctg 80
>46572_miR157:micropc
Length = 83
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 60
||||||||||||||||| ||||||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 4 cagaagatagagagcactgatgatgaaatgcatgaaagggaatggcatctcactcctttg 63
Query: 61 tgctctctattcttctg 77
||||||||| |||||||
Sbjct: 64 tgctctctagtcttctg 80
>44931_miR157:micropc
Length = 84
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 60
||||||||||||||||| ||||||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 5 cagaagatagagagcactgatgatgaaatgcatgaaagggaatggcatctcactcctttg 64
Query: 61 tgctctctattcttctg 77
||||||||| |||||||
Sbjct: 65 tgctctctagtcttctg 81
>44856_miR156:micropc
Length = 77
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 60
||||||||||||||||| ||||||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 1 cagaagatagagagcactgatgatgaaatgcatgaaagggaatggcatctcactcctttg 60
Query: 61 tgctctctattcttctg 77
||||||||| |||||||
Sbjct: 61 tgctctctagtcttctg 77
>46332_miR157:micropc
Length = 162
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgca 32
|||||||||||||||||||||||||| |||||
Sbjct: 5 cagaagatagagagcacagatgatgatatgca 36
>45959_miR157:micropc
Length = 161
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgca 32
|||||||||||||||||||||||||| |||||
Sbjct: 4 cagaagatagagagcacagatgatgatatgca 35
>45352_miR156:micropc
Length = 155
Score = 56.0 bits (28), Expect = 4e-09
Identities = 31/32 (96%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgca 32
|||||||||||||||||||||||||| |||||
Sbjct: 1 cagaagatagagagcacagatgatgatatgca 32
>46830_miR157:micropc
Length = 81
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcgctcctttgtgctctctattcttctg 77
|||||||| |||||||||||||||||| ||||||
Sbjct: 45 tgcatctcactcctttgtgctctctatgcttctg 78
>46821_miR157:micropc
Length = 84
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatga 29
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcgctcctttgtgctctctattcttctg 77
|||||||| |||||||||||||||||| ||||||
Sbjct: 48 tgcatctcactcctttgtgctctctatgcttctg 81
>46718_miR157:micropc
Length = 84
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatga 29
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 53 ctcctttgtgctctctattcttctg 77
|||||||||||||||||| ||||||
Sbjct: 57 ctcctttgtgctctctatgcttctg 81
>46687_miR156:micropc
Length = 74
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcgctcctttgtgctctctattcttctg 77
|||||||| |||||||||||||||||| ||||||
Sbjct: 41 tgcatctcactcctttgtgctctctatgcttctg 74
>46591_miR156:micropc
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatga 26
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 53 ctcctttgtgctctctattcttctg 77
|||||||||||||||||| ||||||
Sbjct: 54 ctcctttgtgctctctatgcttctg 78
>46542_miR157:micropc
Length = 82
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcgctcctttgtgctctctattcttctg 77
|||||||| |||||||||||||||||| ||||||
Sbjct: 46 tgcatctcactcctttgtgctctctatgcttctg 79
>46407_miR156:micropc
Length = 75
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcgctcctttgtgctctctattcttctg 77
|||||||| |||||||||||||||||| ||||||
Sbjct: 42 tgcatctcactcctttgtgctctctatgcttctg 75
>46391_miR157:micropc
Length = 129
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatga 29
>45944_miR157:micropc
Length = 136
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatga 29
>45911_miR157:micropc
Length = 130
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatgatga 30
>45877_miR156:micropc
Length = 123
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatga 26
>45538_miR157:micropc
Length = 85
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatgatga 30
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcgctcctttgtgctctctattcttctg 77
|||||||| |||||||||||||||||| ||||||
Sbjct: 49 tgcatctcactcctttgtgctctctatgcttctg 82
>45460_miR157:micropc
Length = 81
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcgctcctttgtgctctctattcttctg 77
|||||||| |||||||||||||||||| ||||||
Sbjct: 45 tgcatctcactcctttgtgctctctatgcttctg 78
>45409_miR157:micropc
Length = 85
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatgatga 30
Score = 42.1 bits (21), Expect = 5e-05
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 53 ctcctttgtgctctctattcttctg 77
|||||||||||||||||| ||||||
Sbjct: 58 ctcctttgtgctctctatgcttctg 82
>45004_miR156:micropc
Length = 78
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatga 26
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcgctcctttgtgctctctattcttctg 77
|||||||| |||||||||||||||||| ||||||
Sbjct: 45 tgcatctcactcctttgtgctctctatgcttctg 78
>44822_miR157:micropc
Length = 80
Score = 52.0 bits (26), Expect = 6e-08
Identities = 32/34 (94%)
Strand = Plus / Plus
Query: 44 tgcatctcgctcctttgtgctctctattcttctg 77
|||||||| |||||||||||||||||| ||||||
Sbjct: 44 tgcatctcactcctttgtgctctctatgcttctg 77
>44820_miR157:micropc
Length = 137
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatgatga 30
>45936_miR157:micropc
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatg 28
>45840_miR156:micropc
Length = 85
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatg 25
>45457_miR156:micropc
Length = 85
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacagatgatg 25
>45172_miR157:micropc
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacagatgatg 28
>45152_miR157:micropc
Length = 92
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatgatg 29
>44919_miR157:micropc
Length = 92
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatgatg 29
>46595_miR157:micropc
Length = 84
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacaga 20
||||||||||||||||||||
Sbjct: 4 cagaagatagagagcacaga 23
>46488_miR156:micropc
Length = 78
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacaga 20
||||||||||||||||||||
Sbjct: 1 cagaagatagagagcacaga 20
>45574_miR157:micropc
Length = 85
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacaga 20
||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacaga 24
>46518_miR156:micropc
Length = 92
Score = 38.2 bits (19), Expect = 9e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgc 31
||||||||||||||||| ||||||| ||||
Sbjct: 1 cagaagatagagagcactaatgatgatatgc 31
>46149_miR156:micropc
Length = 83
Score = 38.2 bits (19), Expect = 9e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgc 31
||||||||||||||||| ||||||| ||||
Sbjct: 1 cagaagatagagagcactaatgatgatatgc 31
>46100_miR157:micropc
Length = 89
Score = 38.2 bits (19), Expect = 9e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgc 31
||||||||||||||||| ||||||| ||||
Sbjct: 4 cagaagatagagagcactaatgatgatatgc 34
>45968_miR157:micropc
Length = 90
Score = 38.2 bits (19), Expect = 9e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgc 31
||||||||||||||||| ||||||| ||||
Sbjct: 5 cagaagatagagagcactaatgatgatatgc 35
>45009_miR157:micropc
Length = 99
Score = 38.2 bits (19), Expect = 9e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgc 31
||||||||||||||||| ||||||| ||||
Sbjct: 5 cagaagatagagagcactaatgatgatatgc 35
>44895_miR157:micropc
Length = 98
Score = 38.2 bits (19), Expect = 9e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgc 31
||||||||||||||||| ||||||| ||||
Sbjct: 4 cagaagatagagagcactaatgatgatatgc 34
