miRNEST 2.0, an integrative microRNA resource :: BLAST
>48537_gma-miR157c:pmrd
Length = 84
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Minus
Query: 1 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 60
||||||||||||||||| ||||||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 80 cagaagatagagagcactgatgatgaaatgcatgaaagggaatggcatctcactcctttg 21
Query: 61 tgctctctattcttctg 77
||||||||| |||||||
Sbjct: 20 tgctctctagtcttctg 4
>48532_gma-miR156e:pmrd
Length = 124
Score = 113 bits (57), Expect = 2e-26
Identities = 72/77 (93%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 60
||||||||||||||||| ||||||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 25 cagaagatagagagcactgatgatgaaatgcatgaaagggaatggcatctcactcctttg 84
Query: 61 tgctctctattcttctg 77
||||||||| |||||||
Sbjct: 85 tgctctctagtcttctg 101
>48697_mtr-miR156h:pmrd
Length = 94
Score = 105 bits (53), Expect = 4e-24
Identities = 71/77 (92%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 60
|||||||||||||||||||||||||||||||||| |||| ||| ||||||| |||||||
Sbjct: 10 cagaagatagagagcacagatgatgaaatgcatggaaggcaatggcatctcattcctttg 69
Query: 61 tgctctctattcttctg 77
|||||| ||||||||||
Sbjct: 70 tgctctttattcttctg 86
>51597_ptc-miR156g:pmrd
Length = 103
Score = 97.6 bits (49), Expect = 1e-21
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 60
|||||||||||||||||||||||||||||||||| | ||||||||||| ||||||||
Sbjct: 15 cagaagatagagagcacagatgatgaaatgcatggagcttaattgcatctcactcctttg 74
Query: 61 tgctctctattcttctg 77
||||||||| |||||||
Sbjct: 75 tgctctctagtcttctg 91
>52807_ptc-miRf10985-akr:pmrd
Length = 87
Score = 81.8 bits (41), Expect = 6e-17
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 60
||||||||||||||||| || ||||||||||||| | ||||||||||| ||||||||
Sbjct: 6 cagaagatagagagcactgacgatgaaatgcatggagcttaattgcatctcactcctttg 65
Query: 61 tgctctctattcttctg 77
||||||||| |||||||
Sbjct: 66 tgctctctagtcttctg 82
>51598_ptc-miR156h:pmrd
Length = 103
Score = 81.8 bits (41), Expect = 6e-17
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 60
||||||||||||||||| || ||||||||||||| | ||||||||||| ||||||||
Sbjct: 15 cagaagatagagagcactgacgatgaaatgcatggagcttaattgcatctcactcctttg 74
Query: 61 tgctctctattcttctg 77
||||||||| |||||||
Sbjct: 75 tgctctctagtcttctg 91
>54774_vvi-miR156i:pmrd
Length = 103
Score = 79.8 bits (40), Expect = 3e-16
Identities = 68/77 (88%), Gaps = 4/77 (5%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 60
||||||||||||||||||||||||||||||| ||||| ||||||| ||||||||
Sbjct: 15 cagaagatagagagcacagatgatgaaatgc----aaggagccagcatctcactcctttg 70
Query: 61 tgctctctattcttctg 77
|||||||||||||||||
Sbjct: 71 tgctctctattcttctg 87
>46862_aqc-miR156b:pmrd
Length = 83
Score = 75.8 bits (38), Expect = 4e-15
Identities = 68/77 (88%), Gaps = 2/77 (2%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 60
|||||||||||||||||||||||||| ||||||| | || |||||||| ||||||||
Sbjct: 4 cagaagatagagagcacagatgatgatatgcatgga--gagtctgcatctcactcctttg 61
Query: 61 tgctctctattcttctg 77
|||||||||| ||||||
Sbjct: 62 tgctctctatgcttctg 78
>54772_vvi-miR156g:pmrd
Length = 103
Score = 63.9 bits (32), Expect = 1e-11
Identities = 60/69 (86%), Gaps = 4/69 (5%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 60
|||||||||||||||||||||||||| ||||| ||| ||||||||| ||||||||
Sbjct: 15 cagaagatagagagcacagatgatgatgtgcat----ggagtttgcatctcactcctttg 70
Query: 61 tgctctcta 69
|||||||||
Sbjct: 71 tgctctcta 79
>46861_aqc-miR156a:pmrd
Length = 81
Score = 63.9 bits (32), Expect = 1e-11
Identities = 66/77 (85%), Gaps = 4/77 (5%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 60
||||||||||||||||||||||| ||| ||||| ||| |||||||||| | |||||
Sbjct: 4 cagaagatagagagcacagatgacgaattgcat----ggagtttgcatctcgatactttg 59
Query: 61 tgctctctattcttctg 77
|||||||||| ||||||
Sbjct: 60 tgctctctatgcttctg 76
>52045_ptc-miRf10223-akr:pmrd
Length = 86
Score = 61.9 bits (31), Expect = 6e-11
Identities = 66/77 (85%), Gaps = 3/77 (3%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 60
|||||||||||||||||||||||||| |||| || ||| |||||| | ||||||||
Sbjct: 7 cagaagatagagagcacagatgatgatatgc---aatggactctgcatcccactcctttg 63
Query: 61 tgctctctattcttctg 77
|||||||||| ||||||
Sbjct: 64 tgctctctatgcttctg 80
>51600_ptc-miR156j:pmrd
Length = 100
Score = 61.9 bits (31), Expect = 6e-11
Identities = 66/77 (85%), Gaps = 3/77 (3%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcatgaaaggaaattgcatctcgctcctttg 60
|||||||||||||||||||||||||| |||| || ||| |||||| | ||||||||
Sbjct: 15 cagaagatagagagcacagatgatgatatgc---aatggactctgcatcccactcctttg 71
Query: 61 tgctctctattcttctg 77
|||||||||| ||||||
Sbjct: 72 tgctctctatgcttctg 88
>48695_mtr-miR156e:pmrd
Length = 172
Score = 58.0 bits (29), Expect = 9e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcat 33
|||||||||||||||||||||||||| ||||||
Sbjct: 10 cagaagatagagagcacagatgatgatatgcat 42
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 44 tgcatctcgctcctttgtgctctctattcttctg 77
||||| || |||||||||||||||||| ||||||
Sbjct: 131 tgcatatcactcctttgtgctctctatgcttctg 164
>48531_gma-miR156d:pmrd
Length = 151
Score = 58.0 bits (29), Expect = 9e-10
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgcat 33
|||||||||||||||||||||||||| ||||||
Sbjct: 25 cagaagatagagagcacagatgatgatatgcat 57
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 44 tgcatctcgctcctttgtgctctctattcttctg 77
||||||| |||||||||||||||||| ||||||
Sbjct: 95 tgcatcttactcctttgtgctctctatacttctg 128
>48790_nta-miR157:pmrd
Length = 131
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacagatgatga 30
>46924_ath-miR157a:pmrd
Length = 98
Score = 52.0 bits (26), Expect = 6e-08
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatga 26
||||||||||||||||||||||||||
Sbjct: 8 cagaagatagagagcacagatgatga 33
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 43 ttgcatctcgctcctttgtgctctcta 69
|||||||| |||||||||||||||||
Sbjct: 56 ttgcatcttactcctttgtgctctcta 82
>51599_ptc-miR156i:pmrd
Length = 99
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 15 cagaagatagagagcacagatgatg 39
Score = 46.1 bits (23), Expect = 3e-06
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 47 atctcgctcctttgtgctctctattcttctg 77
||||| |||||||||||||||||| ||||||
Sbjct: 58 atctcactcctttgtgctctctatgcttctg 88
>48631_gra-miR157b:pmrd
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 9 cagaagatagagagcacagatgatg 33
Score = 44.1 bits (22), Expect = 1e-05
Identities = 31/34 (91%)
Strand = Plus / Plus
Query: 44 tgcatctcgctcctttgtgctctctattcttctg 77
|||||| | |||||||||||||||||| ||||||
Sbjct: 50 tgcatcccactcctttgtgctctctatgcttctg 83
>48630_gra-miR157a:pmrd
Length = 101
Score = 50.1 bits (25), Expect = 2e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatg 25
|||||||||||||||||||||||||
Sbjct: 9 cagaagatagagagcacagatgatg 33
>46925_ath-miR157b:pmrd
Length = 132
Score = 48.1 bits (24), Expect = 9e-07
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgat 24
||||||||||||||||||||||||
Sbjct: 23 cagaagatagagagcacagatgat 46
Score = 38.2 bits (19), Expect = 9e-04
Identities = 25/27 (92%)
Strand = Plus / Plus
Query: 43 ttgcatctcgctcctttgtgctctcta 69
|||||||| |||||||||||||||||
Sbjct: 71 ttgcatcttactcctttgtgctctcta 97
>54572_smo-miR156d:pmrd
Length = 103
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 58 ttgtgctctctattcttctg 77
||||||||||||||||||||
Sbjct: 67 ttgtgctctctattcttctg 86
>54570_smo-miR156b:pmrd
Length = 112
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacaga 20
||||||||||||||||||||
Sbjct: 15 cagaagatagagagcacaga 34
>48642_han-miR157a:pmrd
Length = 86
Score = 40.1 bits (20), Expect = 2e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacaga 20
||||||||||||||||||||
Sbjct: 5 cagaagatagagagcacaga 24
>54661_stu-miR157a:pmrd
Length = 91
Score = 38.2 bits (19), Expect = 9e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgc 31
||||||||||||||||| ||||||| ||||
Sbjct: 5 cagaagatagagagcactaatgatgatatgc 35
>54532_sly-miR156a:pmrd
Length = 100
Score = 38.2 bits (19), Expect = 9e-04
Identities = 28/31 (90%)
Strand = Plus / Plus
Query: 1 cagaagatagagagcacagatgatgaaatgc 31
||||||||||||||||| ||||||| ||||
Sbjct: 5 cagaagatagagagcactaatgatgatatgc 35
