miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 234 bits (118), Expect = 3e-61
Identities = 145/154 (94%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||||||| ||||||||||||||||||| | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||||||||||||||||||||||||||| |||||| || ||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 172 bits (87), Expect = 1e-42
Identities = 138/155 (89%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||||||||| |||||| ||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | |||||| | |||||||||||||||| ||||||||| || ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| ||||||||||||||||||||| |||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 232 bits (117), Expect = 1e-60
Identities = 147/157 (93%)
Strand = Plus / Plus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
||||||||||||||||||||||||||||||||| ||||||| |||||||||||||||||
Sbjct: 2 tactactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatg 61
Query: 71 ttaataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaa 130
||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 62 ttaatgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaa 121
Query: 131 atgctagaatcacttacattgtgaaacggaggaagta 167
|||||| ||| ||||| ||||||||||||||||||||
Sbjct: 122 atgctaaaatgacttatattgtgaaacggaggaagta 158
Score = 165 bits (83), Expect = 3e-40
Identities = 137/155 (88%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||||||| ||||||||| |||||||||||||||||||||| || ||
Sbjct: 159 ctacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtt 100
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| |||||||| | |||||| | ||||||||||||||||| ||||||||| || |||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||| ||| ||||||||||||||||||||| ||||
Sbjct: 39 gctataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 226 bits (114), Expect = 8e-59
Identities = 144/154 (93%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| |||||||| ||||||||||||||||||||||||||||| |||||| |
Sbjct: 98 atgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaag 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| ||||| ||||||||||||||||||||
Sbjct: 38 ttagaatgacttatattgtgaaacggaggaagta 5
Score = 163 bits (82), Expect = 1e-39
Identities = 139/158 (87%)
Strand = Plus / Plus
Query: 10 atactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||| ||||||||||||||| |||||||||||| | ||| ||||||||||||| ||
Sbjct: 1 atactacttcctccgtttcacaatataagtcattctaactttttccacattcatattaat 60
Query: 70 attaataaatctagacatatatatctatctagattcattaacattaatatgaatagggaa 129
||||| |||||||| | |||||| |||||||||||||||| || ||||||||| || |
Sbjct: 61 gttaatgaatctagataaatatatatatctagattcattaatatcaatatgaatgtggga 120
Query: 130 aatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 121 aatgctagaatgacttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 226 bits (114), Expect = 8e-59
Identities = 144/154 (93%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||||||||||||||||||||||||||||| || ||||||||| | |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||||||| |||| ||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | |||||| | |||||||||||||| || ||||||||| || |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| ||||||||||||||||||||| ||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 222 bits (112), Expect = 1e-57
Identities = 145/156 (92%)
Strand = Plus / Minus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||||||||||||||||||||||||||||||||||||| ||||||||||||| || |
Sbjct: 160 actactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgt 101
Query: 72 taataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaa 131
|||| |||||||||||||||||||||||||||||||||||| |||||||||| || |||
Sbjct: 100 taatgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaa 41
Query: 132 tgctagaatcacttacattgtgaaacggaggaagta 167
||||| ||| ||||||||||||||||||||||||||
Sbjct: 40 tgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 186 bits (94), Expect = 7e-47
Identities = 139/154 (90%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||| |||||||||||||||||||||| | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | |||||| | ||||||||||||||||||||||||||| ||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 220 bits (111), Expect = 5e-57
Identities = 144/155 (92%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||||||||||||||||||||||||| |||||||| | |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| |||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagtat 159
Score = 147 bits (74), Expect = 6e-35
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | |||||| | |||||||||||||| || ||||||||| || |||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| ||||||||||||||||||||| ||||
Sbjct: 38 atagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 220 bits (111), Expect = 5e-57
Identities = 144/155 (92%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
|||||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtt 63
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| ||||||||||||||||||||| |||||||||||| || ||||||||| |||||||
Sbjct: 64 aatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaat 123
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
| |||||| ||||||||||||||||||||| ||||
Sbjct: 124 gttagaatgacttacattgtgaaacggagggagta 158
Score = 186 bits (94), Expect = 7e-47
Identities = 139/154 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatatta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| | | |||||| | ||||||||||||||||| | ||||||| || |||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 218 bits (110), Expect = 2e-56
Identities = 143/154 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||||||||||||||||||||||||||| ||||| ||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatttctagtgaaaata 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 131 bits (66), Expect = 4e-30
Identities = 135/158 (85%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||||||||||||||||||||||||| |||| | | |||||||| ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgtt 63
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| |||||||| | |||||| | |||||||||||||| || ||||||||| || ||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaat 123
Query: 133 gctagaatcacttacattgtgaaacggaggaagtattg 170
||||||| |||||||||||||||||||| |||||||
Sbjct: 124 actagaatgtcttacattgtgaaacggagggagtattg 161
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 218 bits (110), Expect = 2e-56
Identities = 146/158 (92%)
Strand = Plus / Minus
Query: 10 atactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 162 atactacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 103
Query: 70 attaataaatctagacatatatatctatctagattcattaacattaatatgaatagggaa 129
||||| |||||||| | |||||| | | ||||||||||||||| |||||||||| ||||
Sbjct: 102 gttaatgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaa 43
Query: 130 aatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||||| ||||||||||||||||||||| ||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggagggagta 5
Score = 218 bits (110), Expect = 2e-56
Identities = 143/154 (92%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| |||||||||| ||||||||||||||||||| ||||||||| || |||||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 216 bits (109), Expect = 8e-56
Identities = 149/162 (91%), Gaps = 4/162 (2%)
Strand = Plus / Minus
Query: 10 atactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 166 atactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgat 107
Query: 70 attaataaatctagacatatatatctatctagattcattaacatta----atatgaatag 125
||||| ||||||||||||||||||||||||||||||||||||| | ||||||||
Sbjct: 106 gttaatgaatctagacatatatatctatctagattcattaacatcactatgtatgaatat 47
Query: 126 ggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
| |||||||||||| ||||||||||||||||||||||||||
Sbjct: 46 gcgaaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 145 bits (73), Expect = 2e-34
Identities = 137/158 (86%), Gaps = 4/158 (2%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat----tgat 69
|||| ||||||||||||||||||||||||||||||||||| || ||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgat 64
Query: 70 attaataaatctagacatatatatctatctagattcattaacattaatatgaatagggaa 129
||||| |||||||| | |||||| | ||||||||||||||||| | ||||||| || |
Sbjct: 65 gttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtggga 124
Query: 130 aatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||||| ||||||||||||||||||||| ||||
Sbjct: 125 aatgctagaatgacttacattgtgaaacggagggagta 162
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 212 bits (107), Expect = 1e-54
Identities = 143/155 (92%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| |||||||||||||||||||||||||||| ||||||||||||||||||||| ||
Sbjct: 159 ctacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtt 100
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| ||| ||||||||||||||||||||||||||||||||| ||||||||| || ||||
Sbjct: 99 aatgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||||||||||||||||||||| ||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagta 5
Score = 194 bits (98), Expect = 3e-49
Identities = 140/154 (90%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | |||||| | |||| |||||||||||| ||||||||| || ||||
Sbjct: 65 atgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaata 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| ||||||||||||||||||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 210 bits (106), Expect = 5e-54
Identities = 142/154 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||||||||||||| |||||||||||| || |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||||||||||||| | |||||||||||||||| ||||||||| || ||||
Sbjct: 98 atgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 163 bits (82), Expect = 1e-39
Identities = 136/154 (88%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||||||||||| |||| |||||||| ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||| |||||| | ||||||||||||||||||||||||||| | |||||
Sbjct: 65 atgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 210 bits (106), Expect = 5e-54
Identities = 142/154 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||||||| | || ||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||| ||||||| ||||||||||||||||||||||||| |||||||||| | |||||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 172 bits (87), Expect = 1e-42
Identities = 138/155 (89%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||||||||||| | |||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | ||||| | |||| |||||||||||| ||||||||| |||| |||
Sbjct: 65 atgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| ||||||||||||||||||||| |||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 208 bits (105), Expect = 2e-53
Identities = 144/157 (91%)
Strand = Plus / Minus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||||||||||||||||||| |||||||||||||||||| | | ||||||||||||
Sbjct: 160 actactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgc 101
Query: 72 taataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaa 131
|||| |||||||||||||||||||||||||| |||||||||| |||| |||| ||||||
Sbjct: 100 taatgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaa 41
Query: 132 tgctagaatcacttacattgtgaaacggaggaagtat 168
||||||||| |||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagtat 4
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||||||||| |||||||| ||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| | |||||| | |||||| | ||||||||||||| ||| |||||||||| |||||||
Sbjct: 65 atgactctagatagatatatatgtctagattcattagcatcaatatgaatatagaaaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||| ||||||||||||||| ||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagggagta 158
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 208 bits (105), Expect = 2e-53
Identities = 144/157 (91%)
Strand = Plus / Minus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 160 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgt 101
Query: 72 taataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaa 131
|||| ||||||||||||||||| || ||| ||| ||||| || ||||||||| ||||||
Sbjct: 100 taatgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaa 41
Query: 132 tgctagaatcacttacattgtgaaacggaggaagtat 168
||||| ||| ||||||||||||||||||||| |||||
Sbjct: 40 tgctataatgacttacattgtgaaacggagggagtat 4
Score = 186 bits (94), Expect = 7e-47
Identities = 139/154 (90%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||| |||||||| ||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|||||| ||| | |||||| | ||||||||||||||||| ||||||||| || |||||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 204 bits (103), Expect = 3e-52
Identities = 145/159 (91%)
Strand = Plus / Minus
Query: 10 atactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||||| ||||||||| |||||||||||||| | ||||||||||||||||||||||
Sbjct: 162 atactactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgat 103
Query: 70 attaataaatctagacatatatatctatctagattcattaacattaatatgaatagggaa 129
|||| |||||||||||||||||||||||||||||||||||| ||||||||| || |
Sbjct: 102 ggtaatgaatctagacatatatatctatctagattcattaacaacaatatgaatgtggga 43
Query: 130 aatgctagaatcacttacattgtgaaacggaggaagtat 168
||||||||||| ||||||||||||||||||||| |||||
Sbjct: 42 aatgctagaatgacttacattgtgaaacggagggagtat 4
Score = 165 bits (83), Expect = 3e-40
Identities = 131/147 (89%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||| | |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | |||||| | ||||||||||||| ||| ||||||||| || |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Query: 134 ctagaatcacttacattgtgaaacgga 160
| |||| ||||||||| |||||||||
Sbjct: 125 gtggaatgacttacattatgaaacgga 151
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 202 bits (102), Expect = 1e-51
Identities = 142/154 (92%), Gaps = 1/154 (0%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| |||||| ||| | |||||||||||||||| ||||||||| || |||||
Sbjct: 97 atgaatctaaacatatgtatgt-gctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 178 bits (90), Expect = 2e-44
Identities = 139/154 (90%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||| || ||| || | | ||||||||||||||| ||||||||| || |||||
Sbjct: 65 atgaatctag-cacatacatatgtttagattcattaacatcaatatgaatgtgggaaatg 123
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||| ||||
Sbjct: 124 ctagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 200 bits (101), Expect = 5e-51
Identities = 143/157 (91%)
Strand = Plus / Minus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
||||||||||||||||||||||| ||||||||| ||| |||||||||||| ||||||||
Sbjct: 161 tactactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatg 102
Query: 71 ttaataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaa 130
|||| |||||||| |||||||||||||||||||||||||| | ||||||||| || ||
Sbjct: 101 gtaatgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaa 42
Query: 131 atgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||| ||||||||||||||||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggaggaagta 5
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | |||||| | ||||||||||||| ||| ||||| ||| || ||||
Sbjct: 65 atgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaatt 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||| ||| ||||| ||||||||||||||| ||||
Sbjct: 125 ctaaaatgacttagattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 198 bits (100), Expect = 2e-50
Identities = 142/155 (91%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||||||||||| | |||| |||||||||||| ||||||||| |||||||
Sbjct: 96 atgaatctagacatatata--tgtctacattcattaacatcaatatgaatgtagaaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| |||||||||||| ||||||||||||||
Sbjct: 38 ctagaatgacttacattgtggaacggaggaagtat 4
Score = 165 bits (83), Expect = 3e-40
Identities = 137/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||| ||||||||||||||||||||||||| | |||||||||||||| |||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||| |||||||||||| | ||||||||||||||||| ||||||||| || |||||
Sbjct: 65 atgaatgtagacatatata--tgtctagattcattaacatcaatatgaatgtgggaaatg 122
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| |||||||||||| |||||||| ||||
Sbjct: 123 ctagaatgacttacattgtggaacggagggagta 156
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 196 bits (99), Expect = 7e-50
Identities = 141/155 (90%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 159 ctactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatt 100
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| |||||||| | |||||| | ||||||||||||||||| ||||| ||| || ||||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|| | ||| ||||||||||||||||||||||||||
Sbjct: 39 gcaaaaatgacttacattgtgaaacggaggaagta 5
Score = 194 bits (98), Expect = 3e-49
Identities = 140/154 (90%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||| | |||||||||||||| |||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||||||||||||||||||||||||||||| || ||||||||| || |||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||| ||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgatacggagggagta 158
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 196 bits (99), Expect = 7e-50
Identities = 141/155 (90%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
|||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtt 63
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| ||||||||||||||||||||| |||||||||||| || ||||||||| | |||||
Sbjct: 64 aatgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaat 123
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||||| |||||| |||||||| ||||
Sbjct: 124 gctagaatgacttatattgtggaacggagggagta 158
Score = 163 bits (82), Expect = 1e-39
Identities = 136/154 (88%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||| |||||| |||||||||||||||||| |||||||||||||||||||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| | | |||||| | |||||||||||||||| ||||| ||| || |||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 196 bits (99), Expect = 7e-50
Identities = 135/147 (91%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||||||||| | | |||||| |||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||||||||||||||||||||||||||| ||||||||| | |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 134 ctagaatcacttacattgtgaaacgga 160
|||||| |||||||||||||||||||
Sbjct: 38 gtagaatgacttacattgtgaaacgga 12
Score = 174 bits (88), Expect = 3e-43
Identities = 139/156 (89%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||| |||||||||||||||||||||||||| |||||| ||||||||||||||| |||
Sbjct: 5 tactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | |||||| | |||||||||||||| || || |||||| |||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaatatcaacatgaatttagaaaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagtatt 169
||||||| ||||||||||||||||||||| ||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtatt 160
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 196 bits (99), Expect = 7e-50
Identities = 141/155 (90%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||| |
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgct 100
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| ||||||||||||||||||||||||||||||||| || ||||||||| | ||||
Sbjct: 99 aatgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||||| ||||||||||||||||||||
Sbjct: 39 gctagaatgacttatattgtgaaacggaggaagta 5
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | |||||| | ||||||||||||| ||| ||||||||| || |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| ||||||||||||||||||||| ||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 190 bits (96), Expect = 5e-48
Identities = 141/155 (90%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 63
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| ||||||||||||||||||||| |||||| |||||||| ||||| ||| | ||||
Sbjct: 64 aatgaatctagacatatatatctatatagatttattaacatcaatataaat--gtgaaat 121
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||||||||||||||||||||| ||||
Sbjct: 122 gctagaatgacttacattgtgaaacggagggagta 156
Score = 182 bits (92), Expect = 1e-45
Identities = 140/155 (90%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtt 100
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
|||||||||| | | |||||| | ||||||||||||||||| |||||||||| || ||||
Sbjct: 99 aataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
||| |||| ||||||||||||||||||||| ||||
Sbjct: 39 gcttgaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 190 bits (96), Expect = 5e-48
Identities = 141/156 (90%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||||||||||||||||||||| ||||||||| ||||| ||||||||| |
Sbjct: 159 ctactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgct 100
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| |||||||||||||||||| |||||||||||||| || | ||||||| || ||||
Sbjct: 99 aatgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagtat 168
|||||||| |||||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagtat 4
Score = 163 bits (82), Expect = 1e-39
Identities = 136/154 (88%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||||||||||||||||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||| |||||| | ||||||||||||| ||| |||||| || | |||||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||| ||| ||||||||||||||||||||| ||||
Sbjct: 125 ctaaaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 190 bits (96), Expect = 5e-48
Identities = 141/155 (90%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
|||||||||||||||||||||||||||||||| ||||||||||| |||||||||||| ||
Sbjct: 157 ctactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtt 98
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| ||||||||||||||||||||| |||||| |||||||| ||||| ||| | ||||
Sbjct: 97 aatgaatctagacatatatatctatatagatttattaacatcaatataaat--gtgaaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||||||||||||||||||||| ||||
Sbjct: 39 gctagaatgacttacattgtgaaacggagggagta 5
Score = 182 bits (92), Expect = 1e-45
Identities = 140/155 (90%), Gaps = 2/155 (1%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttc--acatttatattgatgtt 61
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
|||||||||| | | |||||| | ||||||||||||||||| |||||||||| || ||||
Sbjct: 62 aataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaat 121
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
||| |||| ||||||||||||||||||||| ||||
Sbjct: 122 gcttgaatgacttacattgtgaaacggagggagta 156
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 186 bits (94), Expect = 7e-47
Identities = 139/154 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||| ||||||| | |||||||||||| ||| |||||||| ||| ||||
Sbjct: 98 atgaatctagacttatatatatgcctagattcattagcatctatatgaatgtggacaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| || |||||||||||||||||||||||
Sbjct: 38 ctagaatgacatacattgtgaaacggaggaagta 5
Score = 170 bits (86), Expect = 4e-42
Identities = 137/154 (88%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||| |||||||||||||| |||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||| ||||||||| ||||||||||||||||| ||||||||| ||||||||
Sbjct: 65 atgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||| ||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 186 bits (94), Expect = 7e-47
Identities = 139/154 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||| |||| ||||||||||||| |||||| |||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||||||||||||||||||||||||||| ||||||||| || |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||| ||| ||||| ||||||||||||||||||||
Sbjct: 38 ctacaatgacttatattgtgaaacggaggaagta 5
Score = 151 bits (76), Expect = 4e-36
Identities = 136/156 (87%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||||||| ||||||||| |||||||||||||||||||||| || ||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtt 63
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| |||||||| | |||||| | ||||||||||||| ||| ||||| ||| | |||||
Sbjct: 64 aatgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaat 123
Query: 133 gctagaatcacttacattgtgaaacggaggaagtat 168
|||||||| |||| ||||||||||||||| |||||
Sbjct: 124 gctagaatggcttatattgtgaaacggagggagtat 159
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 184 bits (93), Expect = 3e-46
Identities = 142/156 (91%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||| |||| |||||||||||||||| |||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaat-agggaaaat 132
|| |||||||||||||||||||||||||||||||||| || ||||||||| |||||||
Sbjct: 97 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaaa- 39
Query: 133 gctagaatcacttacattgtgaaacggaggaagtat 168
||||||| ||||||||||| ||||||||| |||||
Sbjct: 38 -ctagaataacttacattgtaaaacggagggagtat 4
Score = 172 bits (87), Expect = 1e-42
Identities = 139/155 (89%), Gaps = 1/155 (0%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 5 tactccctccgttttacaatgtaagttattctagt-tttcccacattcatattgatatta 63
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | |||||| | ||||||||||||||||| ||||||||| |||||||
Sbjct: 64 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaata 123
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
|||||| ||||||||||||||||||||| |||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagtat 158
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 178 bits (90), Expect = 2e-44
Identities = 140/158 (88%), Gaps = 9/158 (5%)
Strand = Plus / Plus
Query: 10 atactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1 atactacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Query: 70 attaataaatctagacatatatatctatctagattcattaacattaatatgaatagggaa 129
||||| ||||||||||| ||||||||||||||||| ||||||||| || |
Sbjct: 61 gttaatgaatctagacat---------tctagattcattaacatcaatatgaatgtggga 111
Query: 130 aatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||||| ||||||||||||||||||||| ||||
Sbjct: 112 aatgctagaatgacttacattgtgaaacggagggagta 149
Score = 172 bits (87), Expect = 1e-42
Identities = 137/155 (88%), Gaps = 9/155 (5%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 150 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 91
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| |||||||| | ||||||||||||||||| ||||||||| || ||||
Sbjct: 90 aatgaatctaga---------atgtctagattcattaacatcaatatgaatgtgggaaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 178 bits (90), Expect = 2e-44
Identities = 140/157 (89%), Gaps = 6/157 (3%)
Strand = Plus / Minus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||
Sbjct: 155 tactactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatg 96
Query: 71 ttaataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaa 130
|||| |||||||||||| ||||||||||||||| ||| ||||||||| || ||
Sbjct: 95 ctaatgaatctagacata------tatctagattcattagcatcaatatgaatgtgggaa 42
Query: 131 atgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||| ||||||||||||||||||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggaggaagta 5
Score = 141 bits (71), Expect = 4e-33
Identities = 133/154 (86%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||| |||| | ||||||||||||| ||| ||||||||| | |||||
Sbjct: 65 atgaatctag------atatatgtctagattcattagcatcaatatgaatgtaggaaatg 118
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||| ||||||||||||||| ||||
Sbjct: 119 ctagaatgacttatattgtgaaacggagggagta 152
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 178 bits (90), Expect = 2e-44
Identities = 138/154 (89%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||| |||||||||| | |||||||||||||| |||||||| ||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||||| ||||||||||||||||||||| ||||| ||| || |||||
Sbjct: 65 atgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||| ||| |||||| |||||||||||||||||||
Sbjct: 125 ctaaaatgacttactttgtgaaacggaggaagta 158
Score = 133 bits (67), Expect = 9e-31
Identities = 133/155 (85%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||| |||||||||| |||||||||||||||| |||||||| |||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | | |||| | ||||||||||| ||||| ||||| ||| || |||||
Sbjct: 98 atgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
| | ||| |||||| |||||||||||||| |||||
Sbjct: 38 caaaaatgacttactttgtgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 176 bits (89), Expect = 7e-44
Identities = 141/157 (89%), Gaps = 1/157 (0%)
Strand = Plus / Minus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
||||||||||||||||||||||||||||||||||| ||||||||| ||| ||||| || |
Sbjct: 159 actactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgt 100
Query: 72 taataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaa 131
|||| |||||||| |||||| ||||||||||||||||| ||| ||||||||| | |||
Sbjct: 99 taatgaatctagatatatat-tctatctagattcattaccatcaatatgaatgtgagaaa 41
Query: 132 tgctagaatcacttacattgtgaaacggaggaagtat 168
||||||||| |||||||||| ||||||||||||||||
Sbjct: 40 tgctagaatgacttacattgcgaaacggaggaagtat 4
Score = 170 bits (86), Expect = 4e-42
Identities = 138/154 (89%), Gaps = 1/154 (0%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||| |||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | | |||| ||||||||||||||||||||||||| |||| || |||||
Sbjct: 65 atgaatctagataga-atatatatctagattcattaacattaatataaatatgggaaatg 123
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| ||||||||||||||||||||| ||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagggagta 157
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 168 bits (85), Expect = 2e-41
Identities = 136/153 (88%)
Strand = Plus / Minus
Query: 15 actccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatattaa 74
||||||||||||||| ||||||||||||||||||||||||||||||||||| || |||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 75 taaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatgc 134
| ||||||||||||||||||||| |||||||| |||| | ||||||||| | ||||||
Sbjct: 97 tgaatctagacatatatatctatatagattcactaacctctatatgaatataggaaatgc 38
Query: 135 tagaatcacttacattgtgaaacggaggaagta 167
|||||| ||||||||| ||||||||||| ||||
Sbjct: 37 tagaatgacttacattatgaaacggagggagta 5
Score = 121 bits (61), Expect = 3e-27
Identities = 127/149 (85%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| |||||||||||||||||||||||| | |||||||| || |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
| |||||| | | |||||| | |||||||||| |||| | |||||||| || |||||
Sbjct: 65 gtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaatg 124
Query: 134 ctagaatcacttacattgtgaaacggagg 162
||||||| ||||||||| |||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagg 153
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 165 bits (83), Expect = 3e-40
Identities = 137/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||| ||||||||||| |||||||||||||||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||| |||||||||||| ||||||||||||||||||| | ||||||| | ||||||
Sbjct: 65 atgaatttagacatatata--tatctagattcattaacatgagtatgaatgtgaaaaatg 122
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||| ||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagggagta 156
Score = 151 bits (76), Expect = 4e-36
Identities = 136/155 (87%), Gaps = 2/155 (1%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||||||||| |||||||||| | || |||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||| |||||||| | |||| |||||||||||| | ||||||| || |||||
Sbjct: 96 atgaatctag--atatatatatgtctaaattcattaacatgagtatgaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
| ||||| ||||| |||||||||||||||||||||
Sbjct: 38 ccagaatgacttatattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 165 bits (83), Expect = 3e-40
Identities = 137/155 (88%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
|||||||||||||| |||||| |||||||||||| |||||| || |||||||||||| |
Sbjct: 159 ctactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgct 100
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| |||||| ||||||||||||||||| |||||||| ||| |||||||||| |||||||
Sbjct: 99 aatgaatctaaacatatatatctatctaaattcattagcatcaatatgaatatggaaaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||| | |||| |||||||||||||
Sbjct: 39 actagaatgacttatactgtggaacggaggaagta 5
Score = 103 bits (52), Expect = 8e-22
Identities = 130/156 (83%)
Strand = Plus / Plus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||| |||||||| |||| | ||||||||||||| |||| ||| ||||||||||||
Sbjct: 3 actacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgc 62
Query: 72 taataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaa 131
|||| ||| |||| | |||||| | | ||||||||||| ||| |||||||||| | |||
Sbjct: 63 taatgaatttagatagatatatatgtttagattcattagcatcaatatgaatatgagaaa 122
Query: 132 tgctagaatcacttacattgtgaaacggaggaagta 167
|| |||||| ||||| |||||| |||||||| ||||
Sbjct: 123 tgttagaatgacttatattgtggaacggagggagta 158
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 165 bits (83), Expect = 3e-40
Identities = 137/154 (88%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||| ||||||||||||||||||||||| || |||||||| |||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||| ||||||| |||||||||||||||||||| ||||||||| || |||||
Sbjct: 96 atgaatctggacatatgc--ctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 161 bits (81), Expect = 4e-39
Identities = 138/156 (88%), Gaps = 2/156 (1%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||| ||| || | || |||||||||||||| ||||| || || |||||
Sbjct: 65 atgaatctag--ataggcatatgtccagattcattaacatcaatataaacgtgggaaatg 122
Query: 134 ctagaatcacttacattgtgaaacggaggaagtatt 169
||||||| ||||| ||||||||||||||||||||||
Sbjct: 123 ctagaatgacttatattgtgaaacggaggaagtatt 158
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 165 bits (83), Expect = 3e-40
Identities = 136/154 (88%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt-- 62
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|||||||||||| |||||||||| | |||||||||| ||||||||| |||||| |
Sbjct: 63 ----atctagacatatgtatctatctaaactcattaacatcaatatgaatgtggaaaagg 118
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||| ||||
Sbjct: 119 ctagaatgacttacattgtgaaacggagggagta 152
Score = 143 bits (72), Expect = 9e-34
Identities = 134/155 (86%), Gaps = 6/155 (3%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
|||||||||||||||||||||||||||||||||||| ||| |||||||||||||||| ||
Sbjct: 153 ctactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtt 94
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| | | |||| | ||| || | ||||||| |||| ||||||||| |||||||
Sbjct: 93 aatgagtttagatagatacatatgtctagat------acatcaatatgaatgtggaaaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 165 bits (83), Expect = 3e-40
Identities = 137/155 (88%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||| ||||||||||| || |||||| ||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||| ||||| ||| ||||||||| ||||| |||||||| || |||||
Sbjct: 65 atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| ||||||||||||||||||||| |||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtat 159
Score = 147 bits (74), Expect = 6e-35
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| | ||||||| | ||||||||||||||||| |||||||| | |||||
Sbjct: 98 atgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|| ||| ||||||| ||||||||||||| ||||
Sbjct: 38 ataaaatgacttacaatgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 161 bits (81), Expect = 4e-39
Identities = 137/156 (87%), Gaps = 6/156 (3%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |
Sbjct: 153 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtc 94
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| |||||||||| | | |||||||||||| |||| ||||||||| || ||||
Sbjct: 93 aatgaatctagacaga------tgtctagattcattgacatcaatatgaatgtgggaaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagtat 168
| |||||| |||||||||||||||||||||||||||
Sbjct: 39 gatagaatgacttacattgtgaaacggaggaagtat 4
Score = 149 bits (75), Expect = 2e-35
Identities = 134/154 (87%), Gaps = 6/154 (3%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||| |||||||||||||||||||||| | |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||| |||| |||||||||||| |||| ||||||||| || |||||
Sbjct: 65 atgaatctagac------atctgtctagattcattgacatcaatatgaatgtgggaaatg 118
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||| ||||||||||| ||||
Sbjct: 119 ctagaatgacttacattatgaaacggagggagta 152
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 159 bits (80), Expect = 2e-38
Identities = 137/156 (87%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||| || |||||||||| | ||||||||||| ||| ||||||||| |||||||
Sbjct: 98 atgaatttaaacatatatatgcgtatagattcattagcatctatatgaatatagaaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagtatt 169
|||||| ||||||||||||||||||||| ||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggagggagtatt 3
Score = 133 bits (67), Expect = 9e-31
Identities = 133/155 (85%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||| ||||| | | |||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| || |||||| | | || |||||||| ||| |||||||| ||||||||
Sbjct: 65 atgaatctatacgcatatatatgtttaaattcattagcatctatatgaatgtggaaaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| ||||||||||||||||||||| |||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 159 bits (80), Expect = 2e-38
Identities = 129/146 (88%)
Strand = Plus / Plus
Query: 17 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatattaata 76
|||||||||||||||||||||||||||||||||| || |||||||||||||| || |
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaatcgntg 67
Query: 77 aatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatgcta 136
|||||||||||| |||| | |||||||||||| |||| ||||||||| | ||||||||
Sbjct: 68 aatctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaatgcta 127
Query: 137 gaatcacttacattgtgaaacggagg 162
|||| |||||||||||||||||||||
Sbjct: 128 gaatgacttacattgtgaaacggagg 153
Score = 143 bits (72), Expect = 9e-34
Identities = 127/146 (86%)
Strand = Plus / Minus
Query: 17 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatattaata 76
||||||||||||||||||||||||||||||||||||| ||||||||||||||| | |||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 77 aatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatgcta 136
||||||||||||||| | | |||||||||| | | ||||||||| | | ||||||
Sbjct: 95 aatctagacatatatgtatgtctagattcancgatttcaatatgaatgtgaganatgcta 36
Query: 137 gaatcacttacattgtgaaacggagg 162
|||| |||||||||||||||||||||
Sbjct: 35 gaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 159 bits (80), Expect = 2e-38
Identities = 137/156 (87%)
Strand = Plus / Plus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||||| |||||| || |||||||||||||||| |||||||||||||||||| | | |
Sbjct: 3 actactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgt 62
Query: 72 taataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaa 131
|||| |||||||| ||||||| | |||||||||||||||| |||||||| ||||||
Sbjct: 63 taatgaatctagatatatatagatgtctagattcattaacacctatatgaatgtggaaaa 122
Query: 132 tgctagaatcacttacattgtgaaacggaggaagta 167
||||||||| ||||||||||||||||||||| ||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagggagta 158
Score = 157 bits (79), Expect = 6e-38
Identities = 130/147 (88%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||||||||| |||||||||||| | | |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||| ||||| |||||||||||||||||| |||||||| || |||||
Sbjct: 98 atgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacgga 160
|||||| ||||||||| || ||||||
Sbjct: 38 ttagaatgacttacattatggaacgga 12
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 159 bits (80), Expect = 2e-38
Identities = 135/155 (87%), Gaps = 10/155 (6%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 148 tactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 89
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| | |||||| | ||||||||||||||||||||||| ||| || |||||
Sbjct: 88 atga----------atatatatgtctagattcattaacattaatataaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| |||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtat 4
Score = 141 bits (71), Expect = 4e-33
Identities = 126/146 (86%), Gaps = 10/146 (6%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||||||||||||||||| ||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||||| |||||||||||| ||||||||| || |||||
Sbjct: 65 atgaatctagacatatat----------attcattaacatcaatatgaatgtgggaaatg 114
Query: 134 ctagaatcacttacattgtgaaacgg 159
||||||| ||||||||||||||||||
Sbjct: 115 ctagaatgacttacattgtgaaacgg 140
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 157 bits (79), Expect = 6e-38
Identities = 135/154 (87%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| |
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt-- 95
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|||||||||||| |||||||||| | |||||||||| |||||||| ||||||||
Sbjct: 94 ----atctagacatatgtatctatctaaactcattaacatcgatatgaatgtggaaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
Score = 151 bits (76), Expect = 4e-36
Identities = 135/155 (87%), Gaps = 6/155 (3%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
|||||||||||||||||||||||||||||||||||||||| |||||||||||| ||| ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtt 63
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| | | |||| | ||| || | ||||||| |||| |||||||||| |||||||
Sbjct: 64 aatgagtttagatagatacatatgtctagat------acatcaatatgaatatggaaaat 117
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||||||||||||||||||||||||||
Sbjct: 118 gctagaatgacttacattgtgaaacggaggaagta 152
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 155 bits (78), Expect = 2e-37
Identities = 134/155 (86%), Gaps = 12/155 (7%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 147 ctactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 88
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| || ||||||| ||||||||||||||| ||||||||| |||||||
Sbjct: 87 aatgaaactagaca------------tagattcattaacatcaatatgaatgtggaaaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||||||||| ||||||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 129/155 (83%), Gaps = 12/155 (7%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| |||||| | ||||| ||||||||||| ||||||||| || ||||
Sbjct: 64 aatgaatcta------------tgtctagtttcattaacatcaatatgaatgtgggaaat 111
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||||||| |||||||||||||||| |||| ||||
Sbjct: 112 gctagaatgacttacattgtgaaaccgagggagta 146
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| |||||||||||||||||||||| |||||||||||| ||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||||||||||||||||||||||| ||| |||||| || | | |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaata 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| ||||||||| ||||||||||| ||||
Sbjct: 125 gtagaatgacttacattatgaaacggagggagta 158
Score = 125 bits (63), Expect = 2e-28
Identities = 132/155 (85%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| |||||||||||||||| ||| ||||| ||||||||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgcta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | |||||| | |||||||||||| ||| |||||||| ||||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| ||||||||| ||||||||||| |||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 155 bits (78), Expect = 2e-37
Identities = 102/110 (92%)
Strand = Plus / Minus
Query: 36 aagtcattctagcatttcccacattcatattgatattaataaatctagacatatatatct 95
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 96 atctagattcattaacattaatatgaatagggaaaatgctagaatcactt 145
|||||||||||||||||| ||||||||| | |||||||||||| ||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 123 bits (62), Expect = 9e-28
Identities = 98/110 (89%)
Strand = Plus / Plus
Query: 36 aagtcattctagcatttcccacattcatattgatattaataaatctagacatatatatct 95
|||||||||||||||||| ||||||||||||||| ||||| |||||||| | |||||| |
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 96 atctagattcattaacattaatatgaatagggaaaatgctagaatcactt 145
||||||||||||||||| ||||||||| || |||||||||||| ||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 155 bits (78), Expect = 2e-37
Identities = 135/154 (87%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| |||||||||||||||||||||| |||||||||||| ||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||||||| ||||||||||||||| ||| ||||| || | |||||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||| ||||||||||| ||||
Sbjct: 125 ctagaatgacttacattatgaaacggagggagta 158
Score = 133 bits (67), Expect = 9e-31
Identities = 133/155 (85%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| ||||||||||||||||| |||| ||||| ||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgcta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | |||||| | |||||||||||| ||| |||||||| ||||||||
Sbjct: 98 atgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| ||||||||| ||||||||||| |||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 155 bits (78), Expect = 2e-37
Identities = 102/110 (92%)
Strand = Plus / Plus
Query: 36 aagtcattctagcatttcccacattcatattgatattaataaatctagacatatatatct 95
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 96 atctagattcattaacattaatatgaatagggaaaatgctagaatcactt 145
|| ||||||||||||||| ||||||||| || |||||||||||| ||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 123 bits (62), Expect = 9e-28
Identities = 98/110 (89%)
Strand = Plus / Minus
Query: 36 aagtcattctagcatttcccacattcatattgatattaataaatctagacatatatatct 95
|||||||||||||||||||||||||||||||||| ||||| |||||| | | |||||| |
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 96 atctagattcattaacattaatatgaatagggaaaatgctagaatcactt 145
||||||||||||||||| ||||||||| || |||||||||||| ||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 151 bits (76), Expect = 4e-36
Identities = 136/156 (87%)
Strand = Plus / Plus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||||||||||||||| ||||||||||||||||||||| || | |||||||| ||| |
Sbjct: 3 actactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgt 62
Query: 72 taataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaa 131
|||| |||||||||||| | || ||||||||||||||||||| |||||||| | |
Sbjct: 63 taatgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcat 122
Query: 132 tgctagaatcacttacattgtgaaacggaggaagta 167
||||||||| ||||||||| ||||||||||||||||
Sbjct: 123 tgctagaatgacttacattatgaaacggaggaagta 158
Score = 133 bits (67), Expect = 9e-31
Identities = 133/155 (85%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||| ||||||||||||||||||| | | ||||||||||| ||| ||
Sbjct: 159 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 100
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| |||||||| |||| | | | ||||||||||||||||| ||||||||| | |||
Sbjct: 99 aatgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||||||||| ||||||||||| ||||
Sbjct: 39 gctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| ||||||||||||||||||||| |||| |||||||| ||| |||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||||| | || | |||||| |||||||||||| ||||| || || ||||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 143 bits (72), Expect = 9e-34
Identities = 135/156 (86%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||| ||||||||||||||||||||| ||||||| ||||| ||| ||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtt 63
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| ||| |||| ||| || | | ||||||||||||||||| ||||||||| || |||
Sbjct: 64 aatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaat 123
Query: 133 gctagaatcacttacattgtgaaacggaggaagtat 168
|||||||| ||||||||| ||||||||||| |||||
Sbjct: 124 gctagaatgacttacattatgaaacggagggagtat 159
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 147 bits (74), Expect = 6e-35
Identities = 134/154 (87%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| ||||||||||||| ||||||| ||||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| |||||| | | ||||||||||||||||||| ||||| ||| || || |
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||| ||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagta 5
Score = 103 bits (52), Expect = 8e-22
Identities = 130/156 (83%)
Strand = Plus / Plus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||| ||||||||||| |||||||||||||||||| || |||| || ||||| ||| |
Sbjct: 3 actacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgt 62
Query: 72 taataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaa 131
|||| |||||||| ||| | || | | ||||||||||| ||| |||||||| || ||
Sbjct: 63 taatgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaa 122
Query: 132 tgctagaatcacttacattgtgaaacggaggaagta 167
||||| ||| ||||||||| ||||||||||| ||||
Sbjct: 123 tgctaaaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 147 bits (74), Expect = 6e-35
Identities = 136/156 (87%), Gaps = 3/156 (1%)
Strand = Plus / Minus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||||||||||||||| |||||||||||||| | ||||||||||||||||||||||
Sbjct: 157 actactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgc 98
Query: 72 taataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaa 131
||| |||||||| ||||||||||||||||||||| || ||||||||| || |||
Sbjct: 97 caatggatctagac---tatatctatctagattcattagtatcaatatgaatgtgggaaa 41
Query: 132 tgctagaatcacttacattgtgaaacggaggaagta 167
| ||||||| ||||| ||||||||||||||||||||
Sbjct: 40 tactagaatgacttatattgtgaaacggaggaagta 5
Score = 119 bits (60), Expect = 1e-26
Identities = 131/154 (85%), Gaps = 3/154 (1%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||| ||||||||||||| |||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatacta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | ||||| ||||||| |||| ||| ||||||||| || |||||
Sbjct: 65 atgaatctagatagatata---gtctagatccattggcatcaatatgaatgtgggaaatg 121
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
| |||| ||||||||| ||||||||||| ||||
Sbjct: 122 gtggaatgacttacattatgaaacggagggagta 155
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 145 bits (73), Expect = 2e-34
Identities = 128/149 (85%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 19 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatattaataaa 78
||||||||||| ||||||||||||||||||||||| |||||| |||||||| ||||||||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaa 69
Query: 79 tctagacatatatatctatctagattcattaacattaatatgaatagggaaaatgctaga 138
||||| ||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 70 tctag-------------tctagattcattaacatcaatatgaatatggaaaatgctaga 116
Query: 139 atcacttacattgtgaaacggaggaagta 167
|| ||||||||||||||||||||| ||||
Sbjct: 117 atgacttacattgtgaaacggagggagta 145
Score = 113 bits (57), Expect = 8e-25
Identities = 127/153 (83%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||||||||| ||| |||||||||||| |||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 86
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| ||||||| |||||||| ||||| ||| | |||||
Sbjct: 85 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagt 166
||||||| ||||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagt 6
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 143 bits (72), Expect = 9e-34
Identities = 135/156 (86%)
Strand = Plus / Minus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||||||||||||||| ||||||||||||||||||||| || | |||||||| ||| |
Sbjct: 160 actactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgt 101
Query: 72 taataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaa 131
|||| |||||||| ||| | || ||||||||||||||||||| |||||||| | |
Sbjct: 100 taatgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcat 41
Query: 132 tgctagaatcacttacattgtgaaacggaggaagta 167
||||||||| ||||||||| ||||||||||||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggaggaagta 5
Score = 141 bits (71), Expect = 4e-33
Identities = 134/155 (86%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||| ||||||||||||||||||| | | ||||||||||| ||| ||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtt 63
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| |||||||| |||| | | ||||||||||||||||||| ||||||||| | |||
Sbjct: 64 aatgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaat 123
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||||||||| ||||||||||| ||||
Sbjct: 124 gctagaatgacttacattatgaaacggagggagta 158
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 143 bits (72), Expect = 9e-34
Identities = 135/154 (87%), Gaps = 9/154 (5%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||| ||||||||| |||||||||||| |||||||||||| |||
Sbjct: 149 tactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtta 90
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||| |||||||||||||||||||||||| ||| | || |||||
Sbjct: 89 atgaatctagacat--atatctatctagattcattaacatcaatgt------gggaaatg 38
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||||||||||||||| |||||||||
Sbjct: 37 ctagaa-gacttacattgtgaaacagaggaagta 5
Score = 111 bits (56), Expect = 3e-24
Identities = 131/154 (85%), Gaps = 9/154 (5%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||| ||||||||||||||||| ||||||||||||||||||| ||| |||
Sbjct: 5 tacttcctctgtttcacaatgtaagtc-ttctagcatttcccacatt------gatgtta 57
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | |||||| | |||||||||||||||| |||||||||| || |||||
Sbjct: 58 atgaatctagatagatatatgt--ctagattcattaacatcaatatgaatatgggaaatg 115
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||| ||| ||||| ||||||||||||||| ||||
Sbjct: 116 ctaaaatgacttatattgtgaaacggagggagta 149
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 141 bits (71), Expect = 4e-33
Identities = 86/91 (94%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| ||||||||||||||||||||||| || |||||||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 74 ataaatctagacatatatatctatctagatt 104
|| ||||||||||||||||||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagatt 95
Score = 115 bits (58), Expect = 2e-25
Identities = 128/154 (83%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 145 tacttcctccgttttacaatgtaagtcattctagcatttcccacattcata--------- 95
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
||||||| | |||||| | ||||||||||||||||| |||||||||| | |||||
Sbjct: 94 ----atctagatagatatatatgtctagattcattaacatcaatatgaatatgagaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 139 bits (70), Expect = 1e-32
Identities = 136/157 (86%), Gaps = 2/157 (1%)
Strand = Plus / Plus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
||||||| ||||||||||||||||||||||||| ||||||||||||||||||| | |||
Sbjct: 2 tactacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatg 61
Query: 71 ttaataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaa 130
||||| |||| |||||||||||| | ||||||||||||||| |||||||| | |||
Sbjct: 62 ttaatgaatcaagacatatatatgca--tagattcattaacatctatatgaatgtgaaaa 119
Query: 131 atgctagaatcacttacattgtgaaacggaggaagta 167
|||||| ||| |||| |||| ||||||||||| ||||
Sbjct: 120 atgctaaaatgacttgcattatgaaacggagggagta 156
Score = 125 bits (63), Expect = 2e-28
Identities = 132/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| |||| |||||||| |||||||| ||||||||||| ||| |||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| |||||||| | ||| ||||||||||||| | |||||| || |||||
Sbjct: 96 atgaatctatgcatatata--tgtcttgattcattaacatctacatgaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||| ||| ||||||||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 139 bits (70), Expect = 1e-32
Identities = 132/155 (85%), Gaps = 12/155 (7%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||| |||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||| ||||||||| ||||||||| ||||||||| ||||||||
Sbjct: 86 atgtatcta------------tatctagatacattaacatcaatatgaatgtggaaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| ||||||||||||||||||||| |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtat 4
Score = 131 bits (66), Expect = 4e-30
Identities = 131/155 (84%), Gaps = 12/155 (7%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| || ||||| ||||||||| ||||||||| || |||||
Sbjct: 65 atgtatctag------------atatagatacattaacatcaatatgaatgtgggaaatg 112
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| |||||||||||| ||||||||||||||
Sbjct: 113 ctagaatgacttacattgtggaacggaggaagtat 147
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| ||||||||||||||||||||| || |||||||||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||||| | || | |||||| |||||||||||| |||| || || ||||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||| ||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagta 158
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| ||||||||||||||||||||| ||||||| |||| ||| |||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||| |||| ||| || | | ||||||||||||||||| |||||||| | ||||
Sbjct: 98 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||| ||||||||||| ||||
Sbjct: 38 ctagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 139 bits (70), Expect = 1e-32
Identities = 133/154 (86%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| |||||||||| |||||| ||| ||||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||||||| | ||||||||||||||||| ||||||||| | ||||
Sbjct: 65 atgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||||||| ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
Score = 135 bits (68), Expect = 2e-31
Identities = 134/156 (85%)
Strand = Plus / Minus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||||||||||||||| |||||||| | |||||||||| | || |||||||| ||| |
Sbjct: 160 actactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgt 101
Query: 72 taataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaa 131
|||| |||||||||| |||||| | ||||||||||||||||| |||||||| || ||
Sbjct: 100 taatgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaa 41
Query: 132 tgctagaatcacttacattgtgaaacggaggaagta 167
| |||||| ||||||||| ||||||||||||||||
Sbjct: 40 tactagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 137 bits (69), Expect = 6e-32
Identities = 132/155 (85%), Gaps = 16/155 (10%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||| ||||| |||| |||| |||||||||| || |||||
Sbjct: 65 atgaatctag------atatc----------cattgacatcaatatgaatatgggaaatg 108
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| |||||||||||||||||||||||||||
Sbjct: 109 ctagaatgacttacattgtgaaacggaggaagtat 143
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat 87
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 133 bits (67), Expect = 9e-31
Identities = 126/148 (85%), Gaps = 12/148 (8%)
Strand = Plus / Plus
Query: 21 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatattaataaatc 80
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 81 tagacatatatatctatctagattcattaacattaatatgaatagggaaaatgctagaat 140
||| || |||||||||||| || ||||| |||| |||||||||||||||
Sbjct: 72 tag------------atgtagattcattaatatcaatataaatatggaaaatgctagaat 119
Query: 141 cacttacattgtgaaacggaggaagtat 168
||||||||||||||||||||| |||||
Sbjct: 120 gacttacattgtgaaacggagggagtat 147
Score = 131 bits (66), Expect = 4e-30
Identities = 131/155 (84%), Gaps = 12/155 (7%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||||||||| ||| ||| ||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| |||||||||||||||||| ||||||||| | |||||
Sbjct: 86 atgaatcta------------catctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| ||||||||||||||||||| |||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaagaagtat 4
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa
Japonica Group
Length = 144
Score = 133 bits (67), Expect = 9e-31
Identities = 76/79 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 ataaatctagacatatata 92
|| ||||||||||||||||
Sbjct: 65 atgaatctagacatatata 83
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||||||||||| ||||||||| || |||||||||||| |||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 157 cggaggaagta 167
|||||| ||||
Sbjct: 15 cggaggtagta 5
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 133 bits (67), Expect = 9e-31
Identities = 76/79 (96%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 74 ataaatctagacatatata 92
|| ||||||||||||||||
Sbjct: 75 atgaatctagacatatata 57
Score = 97.6 bits (49), Expect = 5e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 66
|||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt 57
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
|||||||||||||| || ||||||||| || |||||||||||| |||||||||||||||
Sbjct: 65 tctagattcattaatataaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 124
Query: 157 cggaggaagtat 168
||||||||||||
Sbjct: 125 cggaggaagtat 136
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 114 taatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagtatt 169
|||||||||| || |||||||||||| ||||||||||||||| ||||| ||||||
Sbjct: 58 taatatgaatgtgggaaatgctagaatgacttacattgtgaaatggagggagtatt 3
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 131 bits (66), Expect = 4e-30
Identities = 132/154 (85%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||| | |||||||||| |||| |||||| | ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||| ||| | | |||||||||||||||| ||||| || || ||||
Sbjct: 98 atgaatctagacatatgtatgtgtttagattcattaacatttatatgtatgtgggcaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||||||||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
Score = 105 bits (53), Expect = 2e-22
Identities = 131/157 (83%)
Strand = Plus / Plus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||| |||||||||||||||||||| | |||||||||| ||||||| ||||| || |
Sbjct: 3 actacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgt 62
Query: 72 taataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaa 131
|||| |||||| ||| ||| || | ||||||||||||| ||| | |||||| || ||
Sbjct: 63 taatgaatctaaacacatacatatgtctagattcattagcatctaaatgaatttgggcaa 122
Query: 132 tgctagaatcacttacattgtgaaacggaggaagtat 168
|||||||| |||||||||||||||||||| |||||
Sbjct: 123 tgctagaaagtcttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 131 bits (66), Expect = 4e-30
Identities = 133/155 (85%), Gaps = 9/155 (5%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
|||||||||| |||||||||||||||||||||||||||||| ||||||||||||||| ||
Sbjct: 150 ctactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtt 91
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| || | ||| || | ||||||||||||||| ||||||||| |||||||
Sbjct: 90 aatgaaac--------tatgtc-acatagattcattaacatcaatatgaatgtggaaaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||||||||| ||||||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggaggaagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||| |||||||||||||||||||||| |||||||||||||||| ||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtt 63
Query: 73 aataaatcta 82
||| ||||||
Sbjct: 64 aatgaatcta 73
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 131 bits (66), Expect = 4e-30
Identities = 131/155 (84%), Gaps = 12/155 (7%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||||||| ||||||||||||| || |||||||||||||||||||||| ||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtt 63
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| ||||||| |||||||||||||||||| |||||||||| | ||||
Sbjct: 64 aatgaatctag------------atctagattcattaacatcaatatgaatatagtaaat 111
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||||| |||||| |||||||||||||
Sbjct: 112 gctagaatgacttatattgtggaacggaggaagta 146
Score = 89.7 bits (45), Expect = 1e-17
Identities = 125/154 (81%), Gaps = 12/154 (7%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||| |||||| |||||||||||||||||| | | |||||||||||| |||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||| |||||||||||||||||| ||||||||| || |||||
Sbjct: 86 atgaatctag------------atctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|| ||| ||||||||| ||||||||||| ||||
Sbjct: 38 gtaaaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 131 bits (66), Expect = 4e-30
Identities = 132/154 (85%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||| | |||||||||| ||||||||||| | | | |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||| | ||| ||| ||||||||||||||| ||||| ||| ||| ||||
Sbjct: 65 atgaatctagacatgtgtatatatttagattcattaacatctatatgtatatggacaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||||||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||| | |||||||||| ||| || ||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| | ||||| | | |||||||||||||||| | |||||| || ||||
Sbjct: 98 atgaatctaaatatatacacatgtctagattcattaacaactaaatgaatgtgggtaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||||||||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 131 bits (66), Expect = 4e-30
Identities = 127/149 (85%), Gaps = 15/149 (10%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
|||||| ||||||||||||||||||||||||||| |||||||||||||||||||||| ||
Sbjct: 4 ctactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 63
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| |||||| ||| ||||||||||||||||||| ||||| ||||||
Sbjct: 64 aatgaatctaaaca--------tatctagattcattaacatcaatat-------gaaaat 108
Query: 133 gctagaatcacttacattgtgaaacggag 161
|||||||| ||||||||||||||||||||
Sbjct: 109 gctagaatgacttacattgtgaaacggag 137
Score = 89.7 bits (45), Expect = 1e-17
Identities = 121/148 (81%), Gaps = 15/148 (10%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||| ||||||||||||||||||||||||||||||||| |||||||||| |||
Sbjct: 143 tactctctccgtttcacaatgtaagtcattctagcattt-------tcatattgatgtta 91
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| || | || ||||||||||||| ||||||||| || |||||
Sbjct: 90 atgaatctagatatgttta--------gattcattaacatcaatatgaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggag 161
|||||| ||||||||||||||||||||
Sbjct: 38 ttagaatgacttacattgtgaaacggag 11
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 131 bits (66), Expect = 4e-30
Identities = 131/155 (84%), Gaps = 12/155 (7%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||||||| ||||||||||||| || |||||||||||||||||||||| ||
Sbjct: 147 ctactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtt 88
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| ||||||| |||||||||||||||||| |||||||||| | ||||
Sbjct: 87 aatgaatctag------------atctagattcattaacatcaatatgaatatagtaaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||||| |||||| |||||||||||||
Sbjct: 39 gctagaatgacttatattgtggaacggaggaagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 125/154 (81%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||| |||||| |||||||||||||||||| | | |||||||||||| |||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||| |||||||||||||||||| ||||||||| || |||||
Sbjct: 65 atgaatctag------------atctagattcattaacatcaatatgaatgtgggaaatg 112
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|| ||| ||||||||| ||||||||||| ||||
Sbjct: 113 gtaaaatgacttacattatgaaacggagggagta 146
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 129 bits (65), Expect = 1e-29
Identities = 74/77 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 ataaatctagacatata 90
|| ||||||||||||||
Sbjct: 65 atgaatctagacatata 81
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||||||||||| ||||||||| || |||||||||||| |||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 157 cggaggaagta 167
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagt 39
||||||||||||||||||||||||||
Sbjct: 107 tactccctccgtttcacaatgtaagt 82
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 142 acttacattgtgaaacggaggaagtat 168
||||||||||||||||||||| |||||
Sbjct: 82 acttacattgtgaaacggagggagtat 108
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 129 bits (65), Expect = 1e-29
Identities = 130/156 (83%), Gaps = 18/156 (11%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| | |||||||||||||||||| |||||||||| || |||||
Sbjct: 65 atga------------------atctagattcattaacatcaatatgaatatgggaaatg 106
Query: 134 ctagaatcacttacattgtgaaacggaggaagtatt 169
||||||| ||||||||| ||||||||||||||||||
Sbjct: 107 ctagaatgacttacattatgaaacggaggaagtatt 142
Score = 109 bits (55), Expect = 1e-23
Identities = 126/154 (81%), Gaps = 18/154 (11%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| |||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| ||||||||||| |||||||||| || |||||
Sbjct: 80 atgaatctaga------------------ttcattaacatcaatatgaatatgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||| ||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 125 bits (63), Expect = 2e-28
Identities = 90/98 (91%), Gaps = 2/98 (2%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 130 ctacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt 71
Query: 73 aataaatctagacatatatatctatctagattcattaa 110
||| |||||||||| |||||||||||||| ||||||
Sbjct: 70 aatggatctagacat--atatctatctagatccattaa 35
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||| ||||||||| ||||||||| || |||||||||||| ||||||||| |||||
Sbjct: 59 tctagatccattaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaa 118
Query: 157 cggaggaagta 167
|||||||||||
Sbjct: 119 cggaggaagta 129
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagt 39
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 142 acttacattgtgaaacggaggaagtatt 169
||||||||||||||||||||| ||||||
Sbjct: 30 acttacattgtgaaacggagggagtatt 3
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 125 bits (63), Expect = 2e-28
Identities = 125/148 (84%), Gaps = 12/148 (8%)
Strand = Plus / Plus
Query: 21 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatattaataaatc 80
||||||||||||||||||||||||||||||||| ||||||||||||||| ||||| ||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 81 tagacatatatatctatctagattcattaacattaatatgaatagggaaaatgctagaat 140
||| || |||||||||||| || ||||| |||| ||||||||||| |||
Sbjct: 72 tag------------atgtagattcattaatatcaatataaatatggaaaatgctataat 119
Query: 141 cacttacattgtgaaacggaggaagtat 168
||||||||||||||||||||| |||||
Sbjct: 120 gacttacattgtgaaacggagggagtat 147
Score = 123 bits (62), Expect = 9e-28
Identities = 130/155 (83%), Gaps = 12/155 (7%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||| |||||||| ||| ||| ||||||||||||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| |||||||||||||||||| ||||||||| | |||||
Sbjct: 86 atgaatcta------------catctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| ||||||||||||||||||| |||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaagaagtat 4
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 125 bits (63), Expect = 2e-28
Identities = 69/71 (97%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatatta 64
Query: 74 ataaatctaga 84
|||||| ||||
Sbjct: 65 ataaatttaga 75
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgatatt 78
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 132/155 (85%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| |||||||| | || ||||||| | ||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||||| | |||| | ||||||||||||||||| |||||||| || ||||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
|||||| |||||||| |||||||||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggaggaagtat 159
Score = 107 bits (54), Expect = 5e-23
Identities = 96/110 (87%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| |||||||| | |||||||||| ||||||||||||| ||| |||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaat 123
|| |||||||| |||||| | | ||||||||||||||||| ||||||||
Sbjct: 98 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaat 49
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 125 bits (63), Expect = 2e-28
Identities = 132/155 (85%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| |||||||| | || ||||||| | ||||||||||| ||| |||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||||| | |||| | ||||||||||||||||| |||||||| || ||||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
|||||| |||||||| |||||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagtat 4
Score = 107 bits (54), Expect = 5e-23
Identities = 96/110 (87%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| |||||||| | |||||||||| ||||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaat 123
|| |||||||| |||||| | | ||||||||||||||||| ||||||||
Sbjct: 65 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaat 114
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 125 bits (63), Expect = 2e-28
Identities = 128/154 (83%), Gaps = 18/154 (11%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||| ||||||||||||||||||||||||||||||||||| |||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| |||| |||||||||||||||||| || |||||
Sbjct: 80 atgaatctatacat------------------attaacattaatatgaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 74 ata 76
|||
Sbjct: 65 ata 67
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 125 bits (63), Expect = 2e-28
Identities = 78/83 (93%)
Strand = Plus / Plus
Query: 85 catatatatctatctagattcattaacattaatatgaatagggaaaatgctagaatcact 144
||||||||| ||||||||||||||||||||||||||||| |||||||||||||| |||
Sbjct: 52 catatatattcatctagattcattaacattaatatgaatatggaaaatgctagaaggact 111
Query: 145 tacattgtgaaacggaggaagta 167
|||||||||||||||||||||||
Sbjct: 112 tacattgtgaaacggaggaagta 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||| ||||||||||| ||| ||||||||| || |||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 74 ataaatctaga 84
|| ||||||||
Sbjct: 74 atgaatctaga 64
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||||||||||||||| |||||||||||||||| ||||| ||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctatcattttccacattcatat 56
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 116 atatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||| |||||||| |||||| ||||||||| ||||||||||| ||||
Sbjct: 56 atatgaatgtggaaaatgatagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 123 bits (62), Expect = 9e-28
Identities = 131/154 (85%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||| | |||||| ||| ||||||||||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||||| | |||| |||||||||||| ||||||||| || | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||||||||||||||||||| ||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggagggagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||| | |||||| | | |||| |||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||| |||||| |||| | ||||||||||||||||| |||||||| || |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatgtgggcaata 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||||||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 123 bits (62), Expect = 9e-28
Identities = 71/74 (95%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 145 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 86
Query: 73 aataaatctagaca 86
|||||||||||||
Sbjct: 85 cataaatctagaca 72
Score = 109 bits (55), Expect = 1e-23
Identities = 127/154 (82%), Gaps = 14/154 (9%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||| |||||||||||||||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| | || | |||||||| || ||||| ||||||||| || |||||
Sbjct: 65 atga--------------atttgtctagatttatgaacatcaatatgaatgtgggaaatg 110
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||||||||
Sbjct: 111 ctagaatgacttacattgtgaaacggaggaagta 144
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 123 bits (62), Expect = 9e-28
Identities = 131/154 (85%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||| | |||||||||| ||||||| ||| | ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
||||||||||||||||| || | | ||||||||||||||| | |||||| | | |||
Sbjct: 98 ataaatctagacatatacatatgtttagattcattaacatctaaatgaatggaggtaata 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||| || |||||||||||||||||||||||||
Sbjct: 38 ctataaagtcttacattgtgaaacggaggaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 125/154 (81%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||| | || ||| ||| || ||||||| | ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttatagtattacctccattcatttagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| |||||| ||| | |||||||| |||||||| | ||| || || ||||
Sbjct: 65 atgaatctaaacatatgtatatgtctagatttattaacatctaaatgtatgtgggcaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||||||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 74 ataaatctagaca 86
|| ||||||||||
Sbjct: 79 atgaatctagaca 67
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||
Sbjct: 69 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 128
Query: 157 cggaggaagta 167
|||||| ||||
Sbjct: 129 cggagggagta 139
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||||||||||||| |||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 74 ataaatctagaca 86
|| ||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||||||||||| |||||||||| || |||||||||||| |||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatatgggaaatgctagaatgacttacattgtgaaa 16
Query: 157 cggaggaagta 167
|||||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 133/157 (84%)
Strand = Plus / Plus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
|||||||||||||||||||||||||||| | | |||||||| | ||||||||||| |||
Sbjct: 2 tactactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatg 61
Query: 71 ttaataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaa 130
||||| |||||||||| | |||| ||||||||||||||||||| || ||||| || |
Sbjct: 62 ttaatgaatctagacacacatatatatctagattcattaacatctatgtgaatgtgggca 121
Query: 131 atgctagaatcacttacattgtgaaacggaggaagta 167
||| || || |||||||||||||||||||| ||||
Sbjct: 122 atgttaaaaagtcttacattgtgaaacggagggagta 158
Score = 111 bits (56), Expect = 3e-24
Identities = 131/156 (83%)
Strand = Plus / Minus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
||||||||||||||||||||||||||| | || || |||| |||||||||| || ||| |
Sbjct: 160 actactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgt 101
Query: 72 taataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaa 131
|||| |||||||| |||||| | | ||||||||||||||||| |||||||| | ||
Sbjct: 100 taatgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaa 41
Query: 132 tgctagaatcacttacattgtgaaacggaggaagta 167
|||||| | |||||||||||||||||||| ||||
Sbjct: 40 tgctaggaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa
Japonica Group
Length = 138
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Plus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| |
Sbjct: 3 actactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 62
Query: 72 taataaatctaga 84
|||| ||||||||
Sbjct: 63 taatgaatctaga 75
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||||||||||| ||||||||| ||||||||||||||| |||||||||||||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaa 16
Query: 157 cggaggaagta 167
|||||| ||||
Sbjct: 15 cggagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacatt 60
||||| ||||||||||| |||| ||||||||||| |||||||||||||
Sbjct: 135 ctacttcctccgtttcataatggaagtcattctaacatttcccacatt 88
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
||||| |||||| |||| |||| ||||||||||||||||
Sbjct: 96 aaatgttagaatgacttccattatgaaacggaggaagta 134
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 121 bits (61), Expect = 3e-27
Identities = 130/152 (85%), Gaps = 2/152 (1%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||||||||||| ||||||||||||| ||| ||||||||| ||| |||| |
Sbjct: 157 ctactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatact 98
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| ||||||| || ||||| | || |||||||||||||| |||||||| || |||
Sbjct: 97 aatgaatctagccacatata--tgtccagattcattaacatctatatgaatgtgggcaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaa 164
|||||||| ||||| ||| |||||||||||||
Sbjct: 39 gctagaatgacttatattatgaaacggaggaa 8
Score = 91.7 bits (46), Expect = 3e-18
Identities = 124/149 (83%), Gaps = 2/149 (1%)
Strand = Plus / Plus
Query: 19 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatattaataaa 78
||||||||||| ||| ||||||||||||||||| ||||||||||||| ||| ||||| ||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 79 tctagacatatatatctatctagattcattaacattaatatgaatagggaaaatgctaga 138
||| ||| |||||| | |||||||||||| || ||| |||| || ||| |||||
Sbjct: 70 tctggac--atatatgtggctagattcattagtatctataagaatgtgggcaatcctaga 127
Query: 139 atcacttacattgtgaaacggaggaagta 167
|| ||||| ||||||||||||||| ||||
Sbjct: 128 atgacttatattgtgaaacggagggagta 156
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 119 bits (60), Expect = 1e-26
Identities = 72/76 (94%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 74 ataaatctagacatat 89
|| |||||||| ||||
Sbjct: 55 atgaatctagatatat 40
Score = 93.7 bits (47), Expect = 8e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 95 tatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtga 154
|||||||||||||||| || ||||||||| || |||||||||||| ||||||||| |||
Sbjct: 43 tatctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatga 102
Query: 155 aacggaggaagtatt 169
|||||||||||||||
Sbjct: 103 aacggaggaagtatt 117
Score = 75.8 bits (38), Expect = 2e-13
Identities = 38/38 (100%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcat 50
||||||||||||||||||||||||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcat 41
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 131 atgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||| ||||||||||||||||||||| ||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 117 bits (59), Expect = 5e-26
Identities = 127/154 (82%), Gaps = 18/154 (11%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||| |||||||||||||||||| |||||||||||||||| |||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| |||| |||||||||||||||||| || |||||
Sbjct: 80 atgaatctatacat------------------attaacattaatatgaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||||||||||||||||||||||| || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 74 ata 76
|||
Sbjct: 65 ata 67
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 117 bits (59), Expect = 5e-26
Identities = 59/59 (100%)
Strand = Plus / Plus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
Score = 103 bits (52), Expect = 8e-22
Identities = 55/56 (98%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 138 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgat 83
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 117 bits (59), Expect = 5e-26
Identities = 131/154 (85%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| |||||||| | |||||||||| || | |||||||||||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||| ||||| | |||||||||||||||||| |||||||| ||| ||||
Sbjct: 65 atgaatctagg--tatatgcgtgtctagattcattaacatttatatgaatgtggacaatg 122
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||||||| ||||||||||||||||
Sbjct: 123 ctagaaagtcttacattatgaaacggaggaagta 156
Score = 101 bits (51), Expect = 3e-21
Identities = 132/158 (83%), Gaps = 2/158 (1%)
Strand = Plus / Minus
Query: 10 atactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||| ||||||||||| |||||||| | |||||||||| |||||||||||| ||
Sbjct: 160 atactacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaat 101
Query: 70 attaataaatctagacatatatatctatctagattcattaacattaatatgaatagggaa 129
||||| |||||||||| ||| || |||||||||||||||| |||||||||| |
Sbjct: 100 gttaatgaatctagacacgcata--tacctagattcattaacatcaatatgaatataggc 43
Query: 130 aatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||| |||||||| ||||||||||| ||||
Sbjct: 42 aatgctagaaagtcttacattatgaaacggagggagta 5
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa
Indica Group
Length = 140
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatatta 64
Query: 74 ataaatctaga 84
|||||| ||||
Sbjct: 65 ataaatttaga 75
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgatatt 78
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 117 bits (59), Expect = 5e-26
Identities = 131/155 (84%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||| |||||||| | |||||||||| |||||||||| || ||| |
Sbjct: 4 ctacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgct 63
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| |||||||||| ||||| ||| ||||||||||||||| |||||||| || |||
Sbjct: 64 aatgaatctagacacatataagtatatagattcattaacatctatatgaatgcgggcaat 123
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
||||||| |||||||||||||||||||| ||||
Sbjct: 124 gctagaaagtcttacattgtgaaacggagggagta 158
Score = 107 bits (54), Expect = 5e-23
Identities = 129/154 (83%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||| | |||||||||| ||| ||||||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| | | ||||| | ||||||||||||| ||| || ||||| || ||||
Sbjct: 98 atgaatctatatacttatatgtgtctagattcattagcatctatgtgaatgtgggcaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||||||| ||||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 136 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 77
Query: 74 ataaatctaga 84
|| ||||||||
Sbjct: 76 atgaatctaga 66
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatat 62
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 90 atatctatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacat 149
|||||||||||||||||||||||| ||||||||| || ||||| |||||| ||||||||
Sbjct: 59 atatctatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttacat 118
Query: 150 tgtgaaacggaggaagta 167
||||||||||||| ||||
Sbjct: 119 tgtgaaacggagggagta 136
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 115 bits (58), Expect = 2e-25
Identities = 70/74 (94%)
Strand = Plus / Minus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
||||||||||||||||||| |||||||||||||||||||||||| ||||||||||||||
Sbjct: 126 tactactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatg 67
Query: 71 ttaataaatctaga 84
||||| ||||||||
Sbjct: 66 ttaatgaatctaga 53
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Minus
Query: 121 aatagggaaaatgctagaatcacttacattgtgaaacggaggaagtatt 169
|||| ||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 51 aatatggaaaatgctagaatgacttacattgtgaaacggaggaagtatt 3
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 95 tatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtga 154
||||||||||||||||||| ||||||||| | |||||||||||| ||||||||| |||
Sbjct: 51 tatctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatga 110
Query: 155 aacggaggaagta 167
|||||||| ||||
Sbjct: 111 aacggagggagta 123
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcattt 52
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||| | || ||| ||| |||||||||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||| ||| ||||||| ||||||||||| ||||||||| || |||
Sbjct: 98 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||| ||| ||||||||||| ||||
Sbjct: 38 ctagaaagtcttatattatgaaacggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 129/155 (83%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| ||| |||| | |||||| ||| |||| |||||||| ||| |||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| || ||||| ||||| || | ||||||||||||||||| |||||||| ||| |||
Sbjct: 65 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||| || |||||||||||||||||||| |||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 115 bits (58), Expect = 2e-25
Identities = 128/154 (83%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||||||||||||| || ||| |||||||| |||
Sbjct: 145 tactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtta 86
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
||||||||||| | || ||||||| ||| ||||||||| || |||||
Sbjct: 85 ataaatctagatagatctatctat-------------catcaatatgaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||| ||| ||||||||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
Score = 115 bits (58), Expect = 2e-25
Identities = 128/154 (83%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgat---- 60
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| | ||| ||||||||||||| |||||||| ||||| |||| | |||||
Sbjct: 61 ---------gatagatagatctatctagatttattaacatcaatataaatatgagaaatg 111
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||| ||||
Sbjct: 112 ctagaatgacttacattgtgaaacggagggagta 145
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 115 bits (58), Expect = 2e-25
Identities = 67/70 (95%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtt 63
Query: 73 aataaatcta 82
||| ||||||
Sbjct: 64 aatgaatcta 73
Score = 105 bits (53), Expect = 2e-22
Identities = 53/53 (100%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 99 tagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacg 158
||||||||||||||| |||||||| || |||||||||||| |||||||||||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 159 gaggaagta 167
|||| ||||
Sbjct: 13 gagggagta 5
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 116 atatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||| || |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 73 atatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagta 124
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 115 bits (58), Expect = 2e-25
Identities = 73/78 (93%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||||||||||||||||||||||| || ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtacta 71
Query: 74 ataaatctagacatatat 91
|| |||||||||||||||
Sbjct: 70 atgaatctagacatatat 53
Score = 87.7 bits (44), Expect = 5e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||||||| | |||||||||| || |||||||||||| |||||||||||||||
Sbjct: 60 tctagattcattagtactaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 119
Query: 157 cggaggaagtat 168
||||||||||||
Sbjct: 120 cggaggaagtat 131
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||| ||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagcatttctcacattcatat 56
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||| | |||||| ||| ||||| | ||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| | | ||| || | ||||||||||||||||| | ||||||| || ||||
Sbjct: 98 atgaatctaaatacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||||||||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattgtgaaacggaggaagta 5
Score = 111 bits (56), Expect = 3e-24
Identities = 131/156 (83%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||| | |||||||||| |||| |||||| | ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||| ||| ||| ||||||||||||||| ||||| | || |||
Sbjct: 65 atgaatctagacatatgtatgtatttagattcattaacatccatatgtacgtgggcaata 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagtatt 169
|||||| |||||||||||||||||||| ||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagtatt 160
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 115 bits (58), Expect = 2e-25
Identities = 130/154 (84%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||| | || ||| ||| |||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||| ||| ||||||| ||||||||||| ||||||||| || |||
Sbjct: 65 atgaatctagacatatgtatatatctaggttcattaacatctatatgaatatgggcaata 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||| ||| ||||||||||| ||||
Sbjct: 125 ctagaaagtcttatattatgaaacggagggagta 158
Score = 101 bits (51), Expect = 3e-21
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| ||| |||| | |||||| ||| |||| |||||||| ||| |||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| || ||||| ||||| || | ||||||||||||||||| |||||||| ||| |||
Sbjct: 98 atgaacctagatatatacatatgtctagattcattaacatctatatgaatgtggacaatc 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||| || |||||||||||||||||||| |||||
Sbjct: 38 ctaaaaagtcttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 113 bits (57), Expect = 8e-25
Identities = 63/65 (96%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 74 ataaa 78
|||||
Sbjct: 77 ataaa 73
Score = 103 bits (52), Expect = 8e-22
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 60
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 113 bits (57), Expect = 8e-25
Identities = 69/73 (94%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| | |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 74 ataaatctagaca 86
|| ||||||||||
Sbjct: 65 atgaatctagaca 77
Score = 105 bits (53), Expect = 2e-22
Identities = 56/57 (98%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 136 ctactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgat 80
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
|||||||||||| |||| ||||||||| || |||||||||||| |||||||||||||||
Sbjct: 75 tctagattcattgacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaa 16
Query: 157 cggaggaagtat 168
||||||||||||
Sbjct: 15 cggaggaagtat 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 109 aacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
||||| ||||||||| || |||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 77 aacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggagggagta 135
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 113 bits (57), Expect = 8e-25
Identities = 132/157 (84%)
Strand = Plus / Minus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
||||||||||| |||||| ||||||||||||| |||||||| |||||||| | ||| |
Sbjct: 160 actactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgt 101
Query: 72 taataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaa 131
|| | |||||||||||||||| || |||||||| |||||| |||| |||| | |||
Sbjct: 100 tagtgaatctagacatatatacatacttagattcactaacatctatatcaatatgagaaa 41
Query: 132 tgctagaatcacttacattgtgaaacggaggaagtat 168
||||||||| ||||||||| ||||||||||| |||||
Sbjct: 40 tgctagaatgacttacattatgaaacggagggagtat 4
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/154 (82%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| ||||||||||||||||||||||| || ||| |||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
| |||||| || ||||| | |||||||||| |||||| | ||||| | ||||||
Sbjct: 65 gtgaatctaagtatgtatatatgtctagattcactaacatccaagtgaatgtgaaaaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||| ||| ||||||||| |||||| |||| ||||
Sbjct: 125 ctacaatgacttacattatgaaacagagggagta 158
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 113 bits (57), Expect = 8e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||| |||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 74 ataaatcta 82
|| ||||||
Sbjct: 70 atgaatcta 62
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 99 tagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacg 158
||||||||||||||| ||||||||| || |||||||||||| ||||||||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaaca 121
Query: 159 gaggaagta 167
|||| ||||
Sbjct: 122 gagggagta 130
Score = 77.8 bits (39), Expect = 5e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||| |||||||||| ||||||||| |||||||| |||||||||||||||| |||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 74 ata 76
|||
Sbjct: 61 ata 63
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 106 attaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaag 165
|||||||| ||||||||| ||||||||||| ||| ||||| |||||||||| |||||||
Sbjct: 62 attaacatcaatatgaatgtggaaaatgctataatgacttatattgtgaaacagaggaag 3
Query: 166 ta 167
||
Sbjct: 2 ta 1
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 111 bits (56), Expect = 3e-24
Identities = 62/64 (96%)
Strand = Plus / Minus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 128 actacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatat 69
Query: 72 taat 75
||||
Sbjct: 68 taat 65
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 102 attcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggag 161
||||||||| || ||||||||| | |||||||||||| ||||||||||||||||||||
Sbjct: 61 attcattaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggag 120
Query: 162 gaagta 167
||||||
Sbjct: 121 gaagta 126
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| ||||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 111 bits (56), Expect = 3e-24
Identities = 68/72 (94%)
Strand = Plus / Minus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
|||||||||||||||||||||||||||||||||||||||||| ||||| | ||||||||
Sbjct: 142 tactactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatg 83
Query: 71 ttaataaatcta 82
||||||||||||
Sbjct: 82 ttaataaatcta 71
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 91 tatctatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacatt 150
||||||| |||||| |||||||| ||||| | | ||||||||||||||| |||||||||
Sbjct: 63 tatctatatagatttattaacatcaatataattgtggaaaatgctagaatgacttacatt 122
Query: 151 gtgaaacggaggaagta 167
|||||||||||| ||||
Sbjct: 123 gtgaaacggagggagta 139
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
|||||||||| ||||||||||||||||||| |||||||| |||| | |||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattttagcatttttcacaattatattgata 61
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Minus
Query: 128 aaaatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||| ||| ||||||||||||||| ||||| ||||
Sbjct: 44 aaaatgctaaaatgacttacattgtgaaatggagggagta 5
>RF00906;MIR1122;AAAA02007011.1/474-313 39946:Oryza sativa Indica
Group
Length = 162
Score = 111 bits (56), Expect = 3e-24
Identities = 131/156 (83%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||| |||||| |||||||| | || ||||||| ||||||||||||| ||||| |
Sbjct: 158 tactccctcggtttcataatgtaagactttttagcattgcccacattcatatagatatca 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| |||||||| | | ||||||||||||||||| |||||||| || || |
Sbjct: 98 atgaatctaaacatatatgtgtgtctagattcattaacatatatatgaatgtgggcaagg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagtatt 169
|||||| |||||||| |||||| |||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaaccgaggaagtatt 3
Score = 61.9 bits (31), Expect = 3e-09
Identities = 79/95 (83%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||| |||||| |||||||| | ||||||| || ||||||||||||| || |||
Sbjct: 5 tacttcctcggtttcataatgtaagactttctagccttgcccacattcatatatatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcatt 108
|| |||||||||| | |||| | | ||||||||||
Sbjct: 65 atgaatctagacacacatatatgtttagattcatt 99
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 111 bits (56), Expect = 3e-24
Identities = 74/80 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||| |||||| ||||||||||||||||| |||||||||||||||| |||| |||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 74 ataaatctagacatatatat 93
||||||||||| ||||||||
Sbjct: 84 ataaatctagatatatatat 65
Score = 77.8 bits (39), Expect = 5e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| |||||||||||||||||||||| |||||||||| |||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtta 64
Query: 74 ata 76
|||
Sbjct: 65 ata 67
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 111 bits (56), Expect = 3e-24
Identities = 129/154 (83%), Gaps = 7/154 (4%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||| |||||||||||| ||||||||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| || ||| | ||| || || ||||||||||| ||||| ||| || ||||
Sbjct: 65 atgaaactacatctattta-------agtttcattaacatcaatataaatgtgggaaata 117
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||||||||
Sbjct: 118 ctagaatgacttacattgtgaaacggaggaagta 151
Score = 99.6 bits (50), Expect = 1e-20
Identities = 129/156 (82%), Gaps = 7/156 (4%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||||||||||||||||||||| |||||||||||| |||||||| ||
Sbjct: 152 ctacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtt 93
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| || || || || || ||| ||||||||||| ||||||||| || ||||
Sbjct: 92 aatgaaact-------taaatagatgtagtttcattaacatcaatatgaatgtgggaaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagtat 168
|||||| ||||| ||||||||||||||| |||||
Sbjct: 39 aatagaatgacttatattgtgaaacggagggagtat 4
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 109 bits (55), Expect = 1e-23
Identities = 64/67 (95%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 74 ataaatc 80
|| ||||
Sbjct: 65 atgaatc 71
Score = 107 bits (54), Expect = 5e-23
Identities = 126/154 (81%), Gaps = 17/154 (11%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||| ||||||||||||||| ||||||||||||||| |||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtta 82
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||| | ||||||||||||| ||||||||| || |||||
Sbjct: 81 atgaatcaa-----------------tgattcattaacatcaatatgaatgtgggaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 109 bits (55), Expect = 1e-23
Identities = 70/75 (93%)
Strand = Plus / Minus
Query: 94 ctatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtg 153
||||||| |||||||||||| |||||||||| |||||||| |||||| ||||||||||||
Sbjct: 78 ctatctacattcattaacatcaatatgaatatggaaaatgttagaatgacttacattgtg 19
Query: 154 aaacggaggaagtat 168
|||||||||||||||
Sbjct: 18 aaacggaggaagtat 4
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||| ||||| ||| |||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 74 ataaatctaga 84
|| ||| ||||
Sbjct: 65 atgaatgtaga 75
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||||||||||| ||||||||||||| ||| |||| || ||||||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgat 81
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||| | ||||| ||| ||| ||||||||| ||||||||||| ||||
Sbjct: 84 aatatgaatatgaaaaatactaaaatgacttacattatgaaacggagggagta 136
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 109 bits (55), Expect = 1e-23
Identities = 58/59 (98%)
Strand = Plus / Plus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 2 tactactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgat 60
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccaca 58
|||||||||||||| ||||||||| ||||||||||||||||||||
Sbjct: 107 tactccctccgttttacaatgtaaatcattctagcatttcccaca 63
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| ||||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| | ||||||||| ||||||||| ||||
Sbjct: 69 aaatgctagaatgatttacattgtaaaacggagggagta 107
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 109 bits (55), Expect = 1e-23
Identities = 131/155 (84%), Gaps = 6/155 (3%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||| ||||||||| |||||| | |||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgcta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||| ||| ||||||| ||||||||||||| ||| ||||| ||| ||||||||
Sbjct: 65 atgaatttag----atatatc--tctagattcattagcatcaatataaatgtggaaaatg 118
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||| ||| ||||| ||||||||||||||| |||||
Sbjct: 119 ctaaaatgacttatattgtgaaacggagggagtat 153
Score = 109 bits (55), Expect = 1e-23
Identities = 129/154 (83%), Gaps = 6/154 (3%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||| ||||||||| |||||||| ||||||| |||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| ||| |||||| |||||||| ||| ||| | ||| | |||||
Sbjct: 92 atgaatctagagata------tatctaaattcattagcatcaatgtaaatgtgagaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||| ||| ||||||||||||||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa Japonica
Group
Length = 162
Score = 109 bits (55), Expect = 1e-23
Identities = 130/155 (83%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| |||||||| | |||||| || |||||||||||| ||| |||
Sbjct: 158 tactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| ||| | |||| | ||||||||||||||||| |||||||| || ||||
Sbjct: 98 atgaatctaaacacacatatatgtctagattcattaacatctatatgaatgtagacaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
|||||| |||||||| |||||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagtat 4
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| |||||||| | |||||||||| | |||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||||| | | | ||||||||||||||| |||||||| ||| ||
Sbjct: 65 atgaatctagacatatatgtgtgtttagattcattaacatctatatgaatgtggacaaac 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||||||| ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||| |||||||||||| |||||||||||||||||||||| |||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 74 ataaatctaga 84
|| ||||||||
Sbjct: 75 atgaatctaga 65
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||| ||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcattttccacattcatattgat 60
Score = 83.8 bits (42), Expect = 8e-16
Identities = 66/74 (89%)
Strand = Plus / Plus
Query: 95 tatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtga 154
||||||||||||||||||| ||||||||| || ||||| |||||| ||||| |||||||
Sbjct: 63 tatctagattcattaacatcaatatgaatgtgggaaatgttagaatgacttatattgtga 122
Query: 155 aacggaggaagtat 168
|||||||| |||||
Sbjct: 123 aacggagggagtat 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Minus
Query: 108 taacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||| ||||||||| ||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 64 taacatcaatatgaatgtggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 109 bits (55), Expect = 1e-23
Identities = 73/79 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||| |||||||| |||||||||||| |||||||||||| |||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 74 ataaatctagacatatata 92
|||||||||||||| ||||
Sbjct: 76 ataaatctagacatttata 58
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
|||||||| |||||||| |||||||||| || |||||||| ||| |||| ||||||||||
Sbjct: 66 tctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaa 125
Query: 157 cggaggaagtatt 169
|||||||||||||
Sbjct: 126 cggaggaagtatt 138
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattca 62
|||| ||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattctagtatttcccacattca 53
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||| ||||||| ||||||||||||||||||||||||||
Sbjct: 43 aaatactagaataacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 107 bits (54), Expect = 5e-23
Identities = 69/74 (93%)
Strand = Plus / Minus
Query: 17 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatattaata 76
||||||||||||||||||||||||||||||||||||| |||||||||||| || | |||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 77 aatctagacatata 90
||||||||||||||
Sbjct: 75 aatctagacatata 62
Score = 97.6 bits (49), Expect = 5e-20
Identities = 52/53 (98%)
Strand = Plus / Plus
Query: 17 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 8 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgat 60
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
|||||||||||| |||| ||||||||| | |||||||||||| |||||||||||||||
Sbjct: 68 tctagattcattgacataaatatgaatgtgagaaatgctagaatgacttacattgtgaaa 127
Query: 157 cggagg 162
||||||
Sbjct: 128 cggagg 133
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 107 bits (54), Expect = 5e-23
Identities = 66/70 (94%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||||||| ||||||||||||||||||||||| || |||||||||||||||
Sbjct: 127 ctactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatt 68
Query: 73 aataaatcta 82
||| ||||||
Sbjct: 67 aatgaatcta 58
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 66
||||| ||||||||||||||| |||||||||||||||||| ||||||| |||||
Sbjct: 4 ctacttcctccgtttcacaatataagtcattctagcattttccacatttatatt 57
Score = 73.8 bits (37), Expect = 7e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 99 tagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacg 158
|||||||||||| || |||||||||| | |||||||||||| ||||||||| |||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 159 gaggaagta 167
|||| ||||
Sbjct: 118 gagggagta 126
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 126 ggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||||||||| ||||| ||||||||||||||||||||
Sbjct: 46 ggaaaatgctagaatgacttatattgtgaaacggaggaagta 5
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 107 bits (54), Expect = 5e-23
Identities = 57/58 (98%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 62
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 74 ataaatctaga 84
|| ||||||||
Sbjct: 72 atgaatctaga 62
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 95 tatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtga 154
||||||||||||||| ||||||||||||| || |||||||||||| ||||| |||||||
Sbjct: 60 tatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtga 119
Query: 155 aacggaggaagta 167
|||||||| ||||
Sbjct: 120 aacggagggagta 132
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Minus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagtat 168
||||||||| || |||||||||||| |||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 4
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 129/154 (83%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||| | |||||| ||| |||| |||||||| ||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||||| | |||| |||||||||||| ||||||||| || | |
Sbjct: 98 atgaatctagacatatatgcgtgtctaaattcattaacatctatatgaatatgggcagta 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| ||||||| |||||||||||| ||||
Sbjct: 38 ctagaaagtcttacatggtgaaacggagggagta 5
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||| ||||||| | |||||| | | |||| |||||||| ||| |||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||| |||||| |||| | ||||||||||||||||| ||||||||| || |||
Sbjct: 65 atgaatttagacacgcatatatgtctagattcattaacatctatatgaatatgggcaata 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||||||||||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggagggagta 158
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 107 bits (54), Expect = 5e-23
Identities = 129/154 (83%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||| | |||||||||| | || || ||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||| ||| ||| || | ||||||||||||||||| | ||||||| || ||||
Sbjct: 65 atgaatctaaacacatacatatgtctagattcattaacatctaaatgaatatgggcaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||| || |||||||||||||||||||||||||
Sbjct: 125 ctaaaaagtcttacattgtgaaacggaggaagta 158
Score = 101 bits (51), Expect = 3e-21
Identities = 129/155 (83%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| |||||||||||||||||||| | || ||||||| |||| |||||| | ||| ||
Sbjct: 159 ctacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtt 100
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| ||||||||||||| ||| | | ||||||||||||| | ||||| ||| | |||
Sbjct: 99 aatgaatctagacatatgtatgtgtttagattcattaacgtctatatgtatatgagcaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
||||||| |||||||||||||||||||| ||||
Sbjct: 39 gctagaaagtcttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 107 bits (54), Expect = 5e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 102 attcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggag 161
|||||||||||| |||||||||| ||||||||||||||| ||||||||||||||||||||
Sbjct: 70 attcattaacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggag 11
Query: 162 gaagta 167
||||||
Sbjct: 10 gaagta 5
Score = 97.6 bits (49), Expect = 5e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
||||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 2 tactacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatg 61
Query: 71 ttaat 75
|||||
Sbjct: 62 ttaat 66
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||| |||||||||| |||||||||||||||||||||| ||| ||||||||||||
Sbjct: 130 ctactctctccgtttcataatgtaagtcattctagcattttccatattcatattgat 74
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 110 acattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggag 161
|||| |||||||||| ||||||||||||||| ||||||||| ||||||||||
Sbjct: 72 acatcaatatgaatatggaaaatgctagaatgacttacattatgaaacggag 123
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 107 bits (54), Expect = 5e-23
Identities = 57/58 (98%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 75
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||| |||||||||||||||||||||||||||||||| || ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 74 ataaatctaga 84
|| ||||||||
Sbjct: 65 atgaatctaga 75
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 95 tatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtga 154
||||||||||||||| ||||||||||||| || |||||||||||| ||||| |||||||
Sbjct: 77 tatctagattcattagcattaatatgaatgtgggaaatgctagaatgacttatattgtga 18
Query: 155 aacggaggaagta 167
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagtat 168
||||||||| || |||||||||||| |||||||||||||||||||||||||||
Sbjct: 80 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagtat 133
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 107 bits (54), Expect = 5e-23
Identities = 128/155 (82%), Gaps = 12/155 (7%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||| |||||||||||||| | |||||||||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgcta 87
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||| ||| |||||||||||||| ||| ||||| |||| | |||||
Sbjct: 86 atgaatttag------------atctagattcattagcatcaatataaatatgaaaaata 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| ||||||||||||||||||||| |||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagggagtat 4
Score = 89.7 bits (45), Expect = 1e-17
Identities = 125/154 (81%), Gaps = 12/154 (7%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||||||| |||| || ||| |||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||| ||||| |||||||| ||| ||||||||| |||||||
Sbjct: 65 atgaatctag------------atctaaattcattagcatcaatatgaatgtagaaaatg 112
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||||||| | ||||||||||||||||||| ||||
Sbjct: 113 ctagaatgatttacattgtgaaacggagggagta 146
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 107 bits (54), Expect = 5e-23
Identities = 72/78 (92%)
Strand = Plus / Minus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||| |||||||||||||||||||| | |||||||||| ||||||||||||| ||| |
Sbjct: 136 actacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgt 77
Query: 72 taataaatctagacatat 89
||||||||||||||||||
Sbjct: 76 taataaatctagacatat 59
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
|||||||| |||||||| |||||||| || |||||||||| ||||||||||||||
Sbjct: 64 tctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaa 123
Query: 157 cggaggaagta 167
|||||||||||
Sbjct: 124 cggaggaagta 134
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||||||||||||| | |||||| | |||||||||| ||||||||||| |||||
Sbjct: 5 tactccctccgtttcatattgtaagactttctagcattgttcacattcatatagatat 62
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||||||| |||||||||||||||||||||||||||| |||||||||
Sbjct: 136 ctacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatt 77
Query: 73 aataaatct 81
||| |||||
Sbjct: 76 aatgaatct 68
Score = 103 bits (52), Expect = 8e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||||||||||||||||||| ||||||||||||||||||| |||||||| ||||||||
Sbjct: 3 actactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatat 62
Query: 72 taat 75
||||
Sbjct: 63 taat 66
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 100 agattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacgg 159
||||||||||| || ||| ||||| || |||||||||||| ||||| ||||||||||||
Sbjct: 68 agattcattaatatcaatgtgaatgtgggaaatgctagaatgacttatattgtgaaacgg 127
Query: 160 aggaagta 167
||||||||
Sbjct: 128 aggaagta 135
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 105 bits (53), Expect = 2e-22
Identities = 56/57 (98%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgat 60
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||||||| |||||||||||||||| |||||||||||||||||| ||
Sbjct: 133 ctacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtt 74
Query: 73 aataaatctagacat 87
||| |||||| ||||
Sbjct: 73 aatgaatctaaacat 59
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 99 tagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacg 158
||||||||||||||| ||||||||| || | |||||||||| ||||| |||||||||||
Sbjct: 64 tagattcattaacatcaatatgaatgtgggatatgctagaatgacttatattgtgaaacg 123
Query: 159 gaggaagta 167
|||||||||
Sbjct: 124 gaggaagta 132
Score = 77.8 bits (39), Expect = 5e-14
Identities = 54/59 (91%)
Strand = Plus / Minus
Query: 109 aacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
||||| ||||||||| ||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 63 aacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||| ||| ||||| ||||||||||||||| |||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 74 ataaatctagaca 86
|| ||||||||||
Sbjct: 87 atgaatctagaca 75
Score = 69.9 bits (35), Expect = 1e-11
Identities = 56/63 (88%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||| |||||||||||||||||||| ||| |||| |||||| |||||||| |||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattttagtatttgtcacatttatattgatgtta 64
Query: 74 ata 76
|||
Sbjct: 65 ata 67
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||||||||||| ||||||||| | |||| ||| ||| |||||||||||||||
Sbjct: 77 tctagattcattaacatcaatatgaatgtgagaaatactaaaatgacttacattgtgaaa 136
Query: 157 cggaggaagta 167
|||||| ||||
Sbjct: 137 cggagggagta 147
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 74 a 74
|
Sbjct: 65 a 65
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 71
Query: 74 at 75
||
Sbjct: 70 at 69
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 104 tcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggagga 163
|||||||||| |||||||| || |||||||||||| ||||||||||||||||||||||
Sbjct: 67 tcattaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagga 126
Query: 164 agtat 168
|||||
Sbjct: 127 agtat 131
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 107 ttaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagt 166
||||||| |||||||| || |||||||||||| ||||||||||||||||||||| |||
Sbjct: 65 ttaacatcgatatgaatgtgggaaatgctagaatgacttacattgtgaaacggagggagt 6
Query: 167 a 167
|
Sbjct: 5 a 5
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 105 bits (53), Expect = 2e-22
Identities = 68/73 (93%)
Strand = Plus / Minus
Query: 95 tatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtga 154
||||||||||||||||||| |||||||||| |||||||||||||| |||||||||||||
Sbjct: 77 tatctagattcattaacatcaatatgaatatagaaaatgctagaatgacttacattgtga 18
Query: 155 aacggaggaagta 167
|||||||| ||||
Sbjct: 17 aacggagggagta 5
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||||||||| | | |||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 74 ataaatctaga 84
|| ||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 103 bits (52), Expect = 8e-22
Identities = 64/68 (94%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 135 ctacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtt 76
Query: 73 aataaatc 80
||| ||||
Sbjct: 75 aatgaatc 68
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 95 tatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtga 154
||||| ||||||||||||| ||||||||| || |||||||| ||| |||||||||||||
Sbjct: 62 tatcttgattcattaacatcaatatgaatgtgggaaatgctaaaatgacttacattgtga 121
Query: 155 aacggaggaagta 167
|||||||||||||
Sbjct: 122 aacggaggaagta 134
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||| ||||||||||||||||||||||| | |||||| ||||||||||||||||
Sbjct: 5 tactccatccgtttcacaatgtaagtcattttggcattttccacattcatattgat 60
Score = 54.0 bits (27), Expect = 7e-07
Identities = 45/51 (88%)
Strand = Plus / Minus
Query: 110 acattaatatgaatagggaaaatgctagaatcacttacattgtgaaacgga 160
|||| ||||||||| ||||||||| | ||| |||||||||||||||||||
Sbjct: 62 acatcaatatgaatgtggaaaatgccaaaatgacttacattgtgaaacgga 12
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 103 bits (52), Expect = 8e-22
Identities = 61/64 (95%)
Strand = Plus / Plus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||| |||||||||||||||| |||||||||||||||||||||||||||||||||| |
Sbjct: 3 actacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgt 62
Query: 72 taat 75
||||
Sbjct: 63 taat 66
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 103 ttcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggagg 162
||||||||||| ||||||||| || |||||||||||| |||| ||||||||||||||||
Sbjct: 69 ttcattaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggagg 10
Query: 163 aagta 167
|||||
Sbjct: 9 aagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattct 45
||||||||| |||||||||||| ||||||||||
Sbjct: 101 ctactcccttcgtttcacaatgcaagtcattct 69
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 103 bits (52), Expect = 8e-22
Identities = 55/56 (98%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 87.7 bits (44), Expect = 5e-17
Identities = 57/60 (95%), Gaps = 1/60 (1%)
Strand = Plus / Minus
Query: 10 atactactccctccgttt-cacaatgtaagtcattctagcatttcccacattcatattga 68
|||||||| ||||||||| |||||| ||||||||||||||||||||||||||||||||||
Sbjct: 120 atactacttcctccgttttcacaatataagtcattctagcatttcccacattcatattga 61
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagtat 168
||||||||| || |||||||||||| ||||| ||||||||||||||| |||||
Sbjct: 57 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagtat 4
Score = 52.0 bits (26), Expect = 3e-06
Identities = 48/54 (88%), Gaps = 1/54 (1%)
Strand = Plus / Plus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtg-aaacggaggaagta 167
||||||||| || |||||||||||| ||||| |||||| ||||||||||||||
Sbjct: 63 aatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagta 116
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 101 bits (51), Expect = 3e-21
Identities = 69/75 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| ||||||||| ||||||||||| |||||||||||| ||| |||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 74 ataaatctagacata 88
|||||||||||||||
Sbjct: 77 ataaatctagacata 63
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattca 62
||||||| ||||||||||| ||||||||| ||||||||||| ||||||||||
Sbjct: 2 tactacttcctccgtttcataatgtaagttattctagcattgcccacattca 53
Score = 71.9 bits (36), Expect = 3e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
|||||||| |||||||| |||||||| ||| ||||||||||| ||||||||| |||||
Sbjct: 67 tctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaa 126
Query: 157 cggaggaagtat 168
|||||| |||||
Sbjct: 127 cggagggagtat 138
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 130 aatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||||| ||||||||| ||||||||||||||||
Sbjct: 42 aatgctagaataacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 101 bits (51), Expect = 3e-21
Identities = 72/79 (91%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
|||||||||||||||||| |||||||||| |||| ||||| |||||||||||||||| ||
Sbjct: 131 ctactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtt 72
Query: 73 aataaatctagacatatat 91
||| |||||||| ||||||
Sbjct: 71 aatgaatctagatatatat 53
Score = 83.8 bits (42), Expect = 8e-16
Identities = 69/78 (88%)
Strand = Plus / Plus
Query: 90 atatctatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacat 149
|||| ||||||||||||||||||| ||||||||| |||||||| |||| | ||||||||
Sbjct: 53 atatatatctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacat 112
Query: 150 tgtgaaacggaggaagta 167
|||||||||||| ||||
Sbjct: 113 ggtgaaacggagggagta 130
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
||||||||||||||||||||| |||||| | ||||||||| || ||||||||
Sbjct: 5 tactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 101 bits (51), Expect = 3e-21
Identities = 60/63 (95%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| |||||||||||||||||||||||||||||||||||| |||||||||||||| ||
Sbjct: 115 ctacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtt 56
Query: 73 aat 75
|||
Sbjct: 55 aat 53
Score = 99.6 bits (50), Expect = 1e-20
Identities = 50/50 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 63
||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 83.8 bits (42), Expect = 8e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 102 attcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggag 161
|||||||||||| ||||||||| | |||||||||||| ||||||||||||||||||||
Sbjct: 49 attcattaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggag 108
Query: 162 gaagta 167
||||||
Sbjct: 109 gaagta 114
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| ||||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa Japonica
Group
Length = 129
Score = 101 bits (51), Expect = 3e-21
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgata 69
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
|||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgata 61
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagtatt 169
||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 57 aatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtatt 3
Score = 67.9 bits (34), Expect = 4e-11
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||| || |||||||||||| ||||||||||||||||||||| ||||
Sbjct: 73 aatatgaatgtggnaaatgctagaataacttacattgtgaaacggagggagta 125
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 101 bits (51), Expect = 3e-21
Identities = 57/59 (96%)
Strand = Plus / Minus
Query: 10 atactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 68
|||||||| ||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 118 atactacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 87.7 bits (44), Expect = 5e-17
Identities = 54/56 (96%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||||||||||||||| |||||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcattt-ccacattcatattgat 59
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||| || |||||||||||| ||||| ||||||||||||||||||||
Sbjct: 62 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 114
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagtat 168
|||||||||||| ||||| ||||||||||||||| |||||
Sbjct: 43 aaatgctagaatgacttatattgtgaaacggagggagtat 4
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||| ||||||||||||||||||| ||||||||||||||| |||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 74 ataaatctaga 84
|| ||||||||
Sbjct: 67 atgaatctaga 57
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 94 ctatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtg 153
|||||||||||||||||||| ||||||||| | |||||||||||| ||||| ||||||
Sbjct: 54 ctatctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtg 113
Query: 154 aaacggaggaagta 167
||||||||||||||
Sbjct: 114 aaacggaggaagta 127
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttc 53
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatat 80
Score = 87.7 bits (44), Expect = 5e-17
Identities = 66/72 (91%), Gaps = 1/72 (1%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcat-tctagcatttcccacattcatattgatatt 72
||||||||||||||||||||||||||| |||| |||||||||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgtt 64
Query: 73 aataaatctaga 84
||| ||||||||
Sbjct: 65 aatgaatctaga 76
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||| || |||||||||||| ||||||||||||||||||||||||||
Sbjct: 85 aatatgaatatgggaaatgctagaatgacttacattgtgaaacggaggaagta 137
Score = 69.9 bits (35), Expect = 1e-11
Identities = 69/79 (87%), Gaps = 1/79 (1%)
Strand = Plus / Minus
Query: 90 atatctatctagattcattaacattaatatgaatagggaaaatgctaga-atcacttaca 148
|||||||||||||||||||||||| ||||||||| || ||||| |||| |||||||
Sbjct: 83 atatctatctagattcattaacatcaatatgaatgtgggaaatgttagaggggacttaca 24
Query: 149 ttgtgaaacggaggaagta 167
|||||||||||||| ||||
Sbjct: 23 ttgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 99.6 bits (50), Expect = 1e-20
Identities = 127/155 (81%), Gaps = 12/155 (7%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||| ||||| |||||||| | ||||| |||||||| ||
Sbjct: 146 tactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgcta 87
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||| |||| ||||||||||||| ||| ||||||||| | ||||||
Sbjct: 86 atgaatttaga------------tctagattcattagcatcaatatgaatgtgaaaaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| ||||||||||||||||||||| |||||
Sbjct: 38 ctagaataacttacattgtgaaacggagggagtat 4
Score = 93.7 bits (47), Expect = 8e-19
Identities = 65/71 (91%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 74 ataaatctaga 84
|| ||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa
Japonica Group
Length = 147
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 64
Query: 74 ataaatctag 83
|| |||||||
Sbjct: 65 atgaatctag 74
Score = 93.7 bits (47), Expect = 8e-19
Identities = 57/59 (96%), Gaps = 1/59 (1%)
Strand = Plus / Minus
Query: 12 actactccctccgtttcacaatgtaagtcat-tctagcatttcccacattcatattgat 69
||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 145 actactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgat 87
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
||||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 126 ctactccctccgtttcacaatgtaagttattctagcattttccacattcatattgata 69
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
|||||||||||||||||||||||||| |||||||||||| |||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgata 61
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagtatt 169
||||||||| ||||||||||||||| ||||||||||||||||||||| ||||||
Sbjct: 57 aatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagtatt 3
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||| ||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 73 aatatgaatgtggaaaatgctagaataacttacattgtgaaacggagggagta 125
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 99.6 bits (50), Expect = 1e-20
Identities = 68/74 (91%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
|||||||||||||||||||||||||| | |||||||||| |||||||||||| ||| ||
Sbjct: 141 ctactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtt 82
Query: 73 aataaatctagaca 86
||||||||||||||
Sbjct: 81 aataaatctagaca 68
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
|||||||| |||||||| |||||||| ||| |||||||||| ||||||||||||||
Sbjct: 70 tctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattgtgaaa 129
Query: 157 cggaggaagta 167
|||||| ||||
Sbjct: 130 cggagggagta 140
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
||||||||||||||||||||||||| | || ||||||| ||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttagcattatccatattcatat 56
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 99.6 bits (50), Expect = 1e-20
Identities = 128/154 (83%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||| | ||||| |||| ||||||||||||| ||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||| ||| ||| |||||| |||| ||| |||||||| || ||||
Sbjct: 98 atgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||| || |||||||| ||||||||||||||||
Sbjct: 38 ctataaagtcttacattatgaaacggaggaagta 5
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/155 (81%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| |||||||| | || ||||||| ||||||||||||| ||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
||||||||| | ||||| | ||||||||||||| ||| |||||||| || ||||
Sbjct: 65 ataaatctatatatataataatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||| |||||||||||||||||||| |||||
Sbjct: 125 ttagaaagtcttacattgtgaaacggagggagtat 159
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||| ||||||||||||||||||||||||| ||
Sbjct: 143 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgcta 84
Query: 74 ataaatctag 83
|| |||||||
Sbjct: 83 atgaatctag 74
Score = 93.7 bits (47), Expect = 8e-19
Identities = 57/59 (96%), Gaps = 1/59 (1%)
Strand = Plus / Plus
Query: 12 actactccctccgtttcacaatgtaagtcat-tctagcatttcccacattcatattgat 69
||||||||||||||||||||||||||||||| | |||||||||||||||||||||||||
Sbjct: 3 actactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgat 61
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 99.6 bits (50), Expect = 1e-20
Identities = 59/62 (95%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||| |||||||| |||||||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 74 at 75
||
Sbjct: 65 at 66
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 104 tcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggagga 163
|||||||||| ||||||||| ||||||||||| ||| |||||||||||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaaatgctaaaatgacttacattgtgaaacggaggg 9
Query: 164 agta 167
||||
Sbjct: 8 agta 5
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||||||||||||||||||| | ||| |||||||| ||||||||||||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatattgat 73
Score = 63.9 bits (32), Expect = 7e-10
Identities = 53/60 (88%)
Strand = Plus / Plus
Query: 108 taacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||| ||||||||| ||||||||||| ||| | ||||||||||||||||||| ||||
Sbjct: 69 taacatcaatatgaatgtggaaaatgctaaaataaattacattgtgaaacggagggagta 128
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| ||||||||||||||||| ||||| ||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 74 ataaatctagacatatat 91
|| |||||||||| ||||
Sbjct: 65 atgaatctagacaaatat 82
Score = 83.8 bits (42), Expect = 8e-16
Identities = 51/54 (94%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 66
||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 131 ctactccctccatttcataatgtaagtcattctagcatttctcacattcatatt 78
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||||||||||| ||||||||| | |||| ||||||| ||||||||| |||||
Sbjct: 75 tctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaa 16
Query: 157 cggaggaagtat 168
||||||||||||
Sbjct: 15 cggaggaagtat 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| ||||||||| ||||| ||||| ||||
Sbjct: 92 aaatgctagaatgacttacattatgaaatggagggagta 130
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 99.6 bits (50), Expect = 1e-20
Identities = 56/58 (96%)
Strand = Plus / Plus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 3 actacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgat 60
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 10 atactactccctccgtttcacaatgtaagtcattctagcat 50
|||||||||||||||||||||||||||||||| ||||||||
Sbjct: 115 atactactccctccgtttcacaatgtaagtcaatctagcat 75
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 131 atgctagaatcacttacattgtgaaacggaggaagta 167
|||||||| | ||||||||||||||||||||| ||||
Sbjct: 75 atgctagattgacttacattgtgaaacggagggagta 111
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 99.6 bits (50), Expect = 1e-20
Identities = 71/78 (91%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||| ||| |||||||||||| ||||| |||||||||||||||| ||
Sbjct: 140 ctacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtt 81
Query: 73 aataaatctagacatata 90
||| ||||||||||||||
Sbjct: 80 aatgaatctagacatata 63
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||||||||||| ||||||||| |||||||| |||||| ||||| ||| |||||
Sbjct: 69 tctagattcattaacatcaatatgaatgtggaaaatgttagaatgacttatattatgaaa 128
Query: 157 cggaggaagta 167
|||||||||||
Sbjct: 129 cggaggaagta 139
Score = 73.8 bits (37), Expect = 7e-13
Identities = 52/57 (91%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
||||||||||||||||| |||||||||||||||||||||| |||||| || |||||
Sbjct: 4 ctactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgat 60
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa Indica
Group
Length = 127
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||||| |||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 124 ctactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| ||||||||||||| ||||| || |||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtta 64
Query: 74 at 75
||
Sbjct: 65 at 66
Score = 71.9 bits (36), Expect = 3e-12
Identities = 57/64 (89%)
Strand = Plus / Minus
Query: 104 tcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggagga 163
|||||||||| ||||||||| ||||| ||||| ||| ||||||||| ||||||||||||
Sbjct: 68 tcattaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggagga 9
Query: 164 agta 167
||||
Sbjct: 8 agta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||| || || ||||||||| |||||||||||||||| |||| ||||
Sbjct: 71 aatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagggagta 123
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 97.6 bits (49), Expect = 5e-20
Identities = 70/77 (90%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| |||||||||| |||||||||| ||||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 74 ataaatctagacatata 90
|| ||||||||||||||
Sbjct: 65 atgaatctagacatata 81
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||||||||||| |||||||| || |||||||||| ||||||||| |||||
Sbjct: 75 tctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaa 16
Query: 157 cggaggaagta 167
|||||||||||
Sbjct: 15 cggaggaagta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatt 51
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 122 tactccctccgtttcataatgtaagactttctagcatt 85
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 97.6 bits (49), Expect = 5e-20
Identities = 88/100 (88%), Gaps = 2/100 (2%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| |||||||||| |||||||||| ||||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacat 113
|| |||||||||| | ||| | |||||||||||||||||
Sbjct: 65 atgaatctagacacacata--tgtctagattcattaacat 102
Score = 93.7 bits (47), Expect = 8e-19
Identities = 128/154 (83%), Gaps = 2/154 (1%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| |||||||| | || ||||||| | | |||||| | ||| |||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtta 97
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||| | | | |||||||||||||||| |||||||| || ||||
Sbjct: 96 atgaatctagacatatgtgtgt--ctagattcattaacatctatatgaatgtgggcaatg 39
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| ||||||||| ||||||||||||||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
||||||||||||||||| ||||||||||||| |||||||||||||||||||||||||
Sbjct: 139 ctactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgat 83
Score = 77.8 bits (39), Expect = 5e-14
Identities = 66/75 (88%)
Strand = Plus / Minus
Query: 94 ctatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtg 153
|||||||||||||||| ||| | ||||||| ||||||||||||||| ||||| ||| ||
Sbjct: 78 ctatctagattcattagcatcagtatgaatgtggaaaatgctagaatgacttatattatg 19
Query: 154 aaacggaggaagtat 168
|||| ||||||||||
Sbjct: 18 aaacagaggaagtat 4
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||| |||||| ||| |||||||||||||||||| ||||||||||| |||| ||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgcta 64
Query: 74 ataaatctaga 84
|| ||||||||
Sbjct: 65 atgaatctaga 75
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Plus
Query: 110 acattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
|||| ||||||||| || |||||||| ||| ||||||||| ||||||||||| ||||
Sbjct: 81 acatcaatatgaatgtgggaaatgctacaatgacttacattatgaaacggagggagta 138
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 97.6 bits (49), Expect = 5e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||||||| ||||||||||||||||| |||||||| |||||||||||| |
Sbjct: 137 ctactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgct 78
Query: 73 aataaatctagac 85
||| |||||||||
Sbjct: 77 aatgaatctagac 65
Score = 79.8 bits (40), Expect = 1e-14
Identities = 55/60 (91%)
Strand = Plus / Plus
Query: 10 atactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||| ||||||||||||||||||||| ||||||| ||||| || ||||||||||||
Sbjct: 1 atactacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgat 60
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||||||| ||| |||||||||| || |||| ||||||| ||||||||| |||||
Sbjct: 66 tctagattcattagcatcaatatgaatatgggaaatactagaatgacttacattatgaaa 125
Query: 157 cggaggaagta 167
|||||| ||||
Sbjct: 126 cggagggagta 136
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||| | |||| ||||||| ||||||||||||||||||||||||||
Sbjct: 57 aatatgaatatgagaaatactagaattacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 97.6 bits (49), Expect = 5e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 133 ctacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgat 77
Score = 91.7 bits (46), Expect = 3e-18
Identities = 67/74 (90%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||| |||||||||||||||| |||||||||||| ||| |||||||| ||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 74 ataaatctagacat 87
|| |||||||||||
Sbjct: 65 atgaatctagacat 78
Score = 73.8 bits (37), Expect = 7e-13
Identities = 64/73 (87%)
Strand = Plus / Minus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||||||| ||| ||||| |||| || |||||||| ||| |||||||||||| ||
Sbjct: 75 tctagattcattagcatcaatataaatatgggaaatgctataatgacttacattgtggaa 16
Query: 157 cggaggaagtatt 169
|||||| ||||||
Sbjct: 15 cggagggagtatt 3
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Plus
Query: 110 acattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
|||| ||||||||| || |||||||||||| |||||||||||||||||||||||||
Sbjct: 75 acatcaatatgaatgtgggaaatgctagaatgtcttacattgtgaaacggaggaagta 132
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 72/80 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||| ||||| ||||||||||||||||||||| | ||||||||||| ||| |||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 74 ataaatctagacatatatat 93
|| |||||||||||||||||
Sbjct: 72 atgaatctagacatatatat 53
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||||||||||||||| ||||||||||||||||||||| || | ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattacctatattcatat 56
Score = 65.9 bits (33), Expect = 2e-10
Identities = 69/81 (85%)
Strand = Plus / Plus
Query: 88 atatatctatctagattcattaacattaatatgaatagggaaaatgctagaatcacttac 147
|||||| | ||||||||||||||||| |||||||| | ||||||||||| ||||||
Sbjct: 53 atatatatgtctagattcattaacatctatatgaatgtgtgcaatgctagaatgacttac 112
Query: 148 attgtgaaacggaggaagtat 168
||| ||||| |||||||||||
Sbjct: 113 attatgaaatggaggaagtat 133
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 130 aatgctagaatcacttacattgtgaaacggaggaagtat 168
||||||||||| ||||||||| ||||||||||| |||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggagggagtat 4
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 75/84 (89%)
Strand = Plus / Plus
Query: 84 acatatatatctatctagattcattaacattaatatgaatagggaaaatgctagaatcac 143
|||| ||||||||||||||||||||||||| |||||| | | ||||||||| ||| ||
Sbjct: 47 acatttatatctatctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgac 106
Query: 144 ttacattgtgaaacggaggaagta 167
||||||||||||||||||||||||
Sbjct: 107 ttacattgtgaaacggaggaagta 130
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||| |||||||| ||| | ||||||||| |||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtta 71
Query: 74 ataaatctaga 84
|| ||||||||
Sbjct: 70 atgaatctaga 60
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||||||||||||| ||||||||||||||| ||| |||||||||||| ||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattttagtatttcccacatttatat 56
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 95.6 bits (48), Expect = 2e-19
Identities = 87/100 (87%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||| ||||||||||||||| | |||||||||| ||||||||||| | ||| |||
Sbjct: 5 tactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacat 113
|| |||||| |||||| ||| | | |||||||||||||||
Sbjct: 65 atgaatctaaacatatgtatgtgtttagattcattaacat 104
Score = 73.8 bits (37), Expect = 7e-13
Identities = 127/156 (81%), Gaps = 2/156 (1%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata--t 71
||||||||||||||||||||||||| | || ||||||| | ||||| ||||| ||| |
Sbjct: 160 tactccctccgtttcacaatgtaagactttttagcattgctcacatacatatatatatgt 101
Query: 72 taataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaa 131
|||| |||||| ||| ||| || | | ||||||||||||||| | |||||| || ||
Sbjct: 100 taatgaatctaaacacatacatatgtttagattcattaacatctaaatgaatgtgggtaa 41
Query: 132 tgctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||||||||||||||| |||| ||||
Sbjct: 40 tgctagaaagtcttacattgtgaaacagagggagta 5
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||||||||||||||||||||||||||||| ||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgat 60
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagtatt 169
|||| ||||||| ||||||||||||||||||||| ||||||
Sbjct: 43 aaatactagaatgacttacattgtgaaacggagggagtatt 3
Score = 56.0 bits (28), Expect = 2e-07
Identities = 49/56 (87%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
||||||||| |||||| ||||||||||||| || ||||| |||||| ||||||||
Sbjct: 143 tactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgat 88
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 95.6 bits (48), Expect = 2e-19
Identities = 75/84 (89%)
Strand = Plus / Minus
Query: 84 acatatatatctatctagattcattaacattaatatgaatagggaaaatgctagaatcac 143
|||||||||||||||||||||||||| ||| ||||| |||| | |||| ||||||| ||
Sbjct: 88 acatatatatctatctagattcattatcatcaatataaatatgagaaatactagaatgac 29
Query: 144 ttacattgtgaaacggaggaagta 167
||| ||||||||||||||||||||
Sbjct: 28 ttatattgtgaaacggaggaagta 5
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||| ||||||||||||| ||||| || ||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 74 ataaatctagacatatatat 93
|| |||||||| | ||||||
Sbjct: 65 atgaatctagatagatatat 84
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttc 53
|||||||||||||||| ||||||||||||| |||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcatttc 89
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||| ||||||||| ||||||||||| ||||
Sbjct: 90 aaatgctacaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcata 64
||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 96 ctacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttc 53
||||||||| ||||||||||||||||||||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcatttc 44
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 57 aaatgctagaatgacttacattgtgaaacggaggaagta 95
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| |||||||||||||||| |||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacagagggagta 5
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 93.7 bits (47), Expect = 8e-19
Identities = 56/59 (94%)
Strand = Plus / Plus
Query: 109 aacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
||||| |||||||||| ||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 73 aacatcaatatgaatatggaaaatgctagaatgacttacattgtgaaacggaggaagta 131
Score = 91.7 bits (46), Expect = 3e-18
Identities = 55/58 (94%)
Strand = Plus / Minus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 133 actacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgat 76
Score = 83.8 bits (42), Expect = 8e-16
Identities = 64/70 (91%), Gaps = 1/70 (1%)
Strand = Plus / Minus
Query: 99 tagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacg 158
||||||||| ||||| ||||||||| ||||||||||||||| |||||||||||||||||
Sbjct: 72 tagattcat-aacatcaatatgaatgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 159 gaggaagtat 168
|||| |||||
Sbjct: 13 gagggagtat 4
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 93.7 bits (47), Expect = 8e-19
Identities = 47/47 (100%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 60
|||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 103
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Minus
Query: 22 ccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagtat 168
|||||||||||| ||||||||||||||||||||| |||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagtat 4
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagtat 168
|||||||||||| ||||||||||||||||||||| |||||
Sbjct: 111 aaatgctagaatgacttacattgtgaaacggagggagtat 150
Score = 54.0 bits (27), Expect = 7e-07
Identities = 30/31 (96%)
Strand = Plus / Plus
Query: 129 aaatgctagaatcacttacattgtgaaacgg 159
|||||||||||| ||||||||||||||||||
Sbjct: 68 aaatgctagaatgacttacattgtgaaacgg 98
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 51/52 (98%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatat 56
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 90 atatctatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacat 149
|||||||||||||||||||||||| ||||||||| | |||||| |||||| |||||||
Sbjct: 53 atatctatctagattcattaacatcaatatgaatgtgaaaaatgatagaatggcttacat 112
Query: 150 tgtgaaacggaggaagta 167
| ||||||||||||||||
Sbjct: 113 tatgaaacggaggaagta 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||| |||||||| ||||||| ||||| ||||||||||||||| ||
Sbjct: 131 ctacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtt 72
Query: 73 aataaatctaga 84
||| ||||||||
Sbjct: 71 aatgaatctaga 60
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 116 atatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||| || |||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 56 atatgaatgtgggaaatgctagaatgacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 93.7 bits (47), Expect = 8e-19
Identities = 53/55 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 68
|||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgtttatattga 59
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| ||||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatt 51
|||||| | ||||||||||||| |||||||||||||||||
Sbjct: 106 actacttcttccgtttcacaatataagtcattctagcatt 67
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 130 aatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||||| ||||| ||||||||||||| ||||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacggaagaagta 104
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima (African
rice)
Length = 130
Score = 93.7 bits (47), Expect = 8e-19
Identities = 71/79 (89%)
Strand = Plus / Minus
Query: 89 tatatctatctagattcattaacattaatatgaatagggaaaatgctagaatcacttaca 148
||||||||| ||||||||||||||| ||||| | | ||||||||||||||| |||||||
Sbjct: 83 tatatctatatagattcattaacatcaatataattgtggaaaatgctagaataacttaca 24
Query: 149 ttgtgaaacggaggaagta 167
|||||||||||||| ||||
Sbjct: 23 ttgtgaaacggagggagta 5
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||| |||||||||||| ||||| | |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 74 ataaatcta 82
|| ||||||
Sbjct: 65 atgaatcta 73
Score = 63.9 bits (32), Expect = 7e-10
Identities = 32/32 (100%)
Strand = Plus / Minus
Query: 11 tactactccctccgtttcacaatgtaagtcat 42
||||||||||||||||||||||||||||||||
Sbjct: 129 tactactccctccgtttcacaatgtaagtcat 98
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 142 acttacattgtgaaacggaggaagta 167
||||||||||||||||||||| ||||
Sbjct: 101 acttacattgtgaaacggagggagta 126
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 93.7 bits (47), Expect = 8e-19
Identities = 71/79 (89%)
Strand = Plus / Plus
Query: 88 atatatctatctagattcattaacattaatatgaatagggaaaatgctagaatcacttac 147
|||||| | ||||||||||||| ||| |||||||||| ||||||||||| ||| |||||
Sbjct: 53 atatatatgtctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttat 112
Query: 148 attgtgaaacggaggaagt 166
|||||||||||||||||||
Sbjct: 113 attgtgaaacggaggaagt 131
Score = 85.7 bits (43), Expect = 2e-16
Identities = 67/75 (89%)
Strand = Plus / Minus
Query: 19 cctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatattaataaa 78
||||||||||||||| ||||||||| |||||||| || |||||||||||| |||| ||
Sbjct: 127 cctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaa 68
Query: 79 tctagacatatatat 93
|||||||||||||||
Sbjct: 67 tctagacatatatat 53
Score = 75.8 bits (38), Expect = 2e-13
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 24 gtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||||||||||||||||||||||||||||||| |||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccgcattcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 116 atatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagtat 168
|||||||| || |||||||||||| |||||||||||||||| ||| ||||||
Sbjct: 56 atatgaatgcgggaaatgctagaatgacttacattgtgaaacagagaaagtat 4
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa Japonica
Group
Length = 160
Score = 93.7 bits (47), Expect = 8e-19
Identities = 89/103 (86%)
Strand = Plus / Minus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
||||||| |||||||||||||||||||| | || ||||||| ||||||| || | ||||
Sbjct: 159 tactacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagata 100
Query: 71 ttaataaatctagacatatatatctatctagattcattaacat 113
||||| |||||||| |||| ||| | |||||||||||||||||
Sbjct: 99 ttaatgaatctagatatatgtatgtttctagattcattaacat 57
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/154 (82%), Gaps = 2/154 (1%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| |||||||| | ||||| |||| |||||| |||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatgtta 62
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| |||||||| | ||| || |||||||||||||||| || | || ||| ||| ||||
Sbjct: 63 atgaatctagaaacatacatatatctagattcattaatatctaaataaatgtggacaatg 122
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
||| || |||||||||||||||||||||||||
Sbjct: 123 ctaaaaagtcttacattgtgaaacggaggaagta 156
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 93.7 bits (47), Expect = 8e-19
Identities = 68/75 (90%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||| ||| |||| |||||||||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtta 64
Query: 74 ataaatctagacata 88
|||||| || |||||
Sbjct: 65 ataaatttatacata 79
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 106 attaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaag 165
|||||||| ||||||||| ||||||| ||| ||| ||||||||||||||||||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggaggaag 7
Query: 166 ta 167
||
Sbjct: 6 ta 5
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcatt 43
||||||||||||||||||||||||| ||||
Sbjct: 110 tactccctccgtttcacaatgtaagccatt 81
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 143 cttacattgtgaaacggaggaagtat 168
|||||||||||||||||||| |||||
Sbjct: 86 cttacattgtgaaacggagggagtat 111
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 91.7 bits (46), Expect = 3e-18
Identities = 46/46 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 59
||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 50
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatt 51
|||||||||||||||||||||||| |||||||||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| ||||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggagggagta 5
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 130 aatgctagaatcacttacattgtgaaacggaggaagtatt 169
||||||||||| | ||||||||||||||||||| ||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagggagtatt 97
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 91.7 bits (46), Expect = 3e-18
Identities = 127/154 (82%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||| |||||| |||||||| | ||||||| || |||||||| |||| |||| ||
Sbjct: 5 tacttcctctgtttcataatgtaagactttctagcgttgcccacatttatatagatacta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||||| | | |||||||||||| ||| |||||||| || ||||
Sbjct: 65 atgaatctagacatatatgtgtgcctagattcattagcatatatatgaatgtgggcaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||||||| ||||||||||| ||||
Sbjct: 125 ctagaaagtcttacattatgaaacggagggagta 158
Score = 79.8 bits (40), Expect = 1e-14
Identities = 82/96 (85%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| |||||||| | |||||||||| ||||||||||||| || ||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgcta 99
Query: 74 ataaatctagacatatatatctatctagattcatta 109
|| ||||||| || | |||| | |||||||||||||
Sbjct: 98 atgaatctaggcacacatatatgtctagattcatta 63
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 91.7 bits (46), Expect = 3e-18
Identities = 49/50 (98%)
Strand = Plus / Minus
Query: 10 atactactccctccgtttcacaatgtaagtcattctagcatttcccacat 59
|||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 132 atactactccctccgtttcataatgtaagtcattctagcatttcccacat 83
Score = 58.0 bits (29), Expect = 4e-08
Identities = 65/77 (84%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||| ||||||| ||| |||||||||||| |||||| |||||| |||| || ||||
Sbjct: 5 tacttccttcgtttcataatataagtcattctaacatttctcacatttatatggaaatta 64
Query: 74 ataaatctagacatata 90
| |||||||| |||||
Sbjct: 65 gtgaatctagatatata 81
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| ||||||||| ||||||||||| ||||
Sbjct: 90 aaatgctagaatgacttacattatgaaacggagggagta 128
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 52/54 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattg 67
|||| ||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattg 58
Score = 87.7 bits (44), Expect = 5e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 79
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Plus
Query: 116 atatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagtat 168
||||||||| ||||||||||||||| ||||||||||||||||||||| |||||
Sbjct: 79 atatgaatatggaaaatgctagaatgacttacattgtgaaacggagggagtat 131
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Minus
Query: 102 attcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggag 161
||||||||||| ||||||||| | |||||||||||| ||||||||||||||||||||
Sbjct: 70 attcattaacagcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggag 11
Query: 162 gaagta 167
||||||
Sbjct: 10 gaagta 5
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 91.7 bits (46), Expect = 3e-18
Identities = 70/78 (89%)
Strand = Plus / Plus
Query: 90 atatctatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacat 149
|||||||||||||||||||||||| ||||| | | ||||||||||||| ||||||||
Sbjct: 53 atatctatctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacat 112
Query: 150 tgtgaaacggaggaagta 167
||||||||||||||||||
Sbjct: 113 tgtgaaacggaggaagta 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||||||||||||| ||||||||||||||||||| ||||| |||||||||||
Sbjct: 5 tactccctccgtttaacaatgtaagtcattctagtatttctcacattcatat 56
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||||||||| ||| | |||||||| |||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtta 71
Query: 74 ataaatctaga 84
|| ||||||||
Sbjct: 70 atgaatctaga 60
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||| ||||||| ||||||||||| ||||||||| ||||
Sbjct: 43 aaatactagaatgacttacattgttaaacggagggagta 5
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 91.7 bits (46), Expect = 3e-18
Identities = 58/62 (93%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||| |||||||||||||||||||||||||| ||| |||| |||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 74 at 75
||
Sbjct: 61 at 60
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 66
|||| ||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Minus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||| || |||||||| ||| ||||||||||||||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagta 5
Score = 60.0 bits (30), Expect = 1e-08
Identities = 57/66 (86%)
Strand = Plus / Plus
Query: 103 ttcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggagg 162
||||||||||| | ||| ||| || |||||||||||| ||||| |||||||||||||||
Sbjct: 57 ttcattaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Query: 163 aagtat 168
|||||
Sbjct: 117 gagtat 122
>RF00906;MIR1122;AAAA02015106.1/4906-5019 39946:Oryza sativa Indica
Group
Length = 114
Score = 91.7 bits (46), Expect = 3e-18
Identities = 73/82 (89%)
Strand = Plus / Minus
Query: 42 ttctagcatttcccacattcatattgatattaataaatctagacatatatatctatctag 101
|||||||||| ||||||||||||| ||| ||||| ||||||| || |||||| |||||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacatatatatatctag 47
Query: 102 attcattaacattaatatgaat 123
|||||||||||| ||||||||
Sbjct: 46 attcattaacatatatatgaat 25
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 42 ttctagcatttcccacattcatattgatattaataaatctagacatatatatctatctag 101
|||||||||| ||||||||||||| || ||||| |||||||| |||||||| | ||||
Sbjct: 9 ttctagcattgcccacattcatatatatgttaatgaatctagatatatatatgtgcctag 68
Query: 102 attcattaacattaatatgaat 123
|||||||||||| ||||||||
Sbjct: 69 attcattaacatctatatgaat 90
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa
Indica Group
Length = 143
Score = 89.7 bits (45), Expect = 1e-17
Identities = 69/77 (89%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||||||||||||| ||||||||| || ||| |||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgcta 64
Query: 74 ataaatctagacatata 90
|| ||||||||||||||
Sbjct: 65 atgaatctagacatata 81
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||||||||||||||| ||||||||| |||||||| ||||||||||||||||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgat 84
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||||||| ||| ||||| |||| | |||||||| ||| |||||||||||||||
Sbjct: 75 tctagattcattagcatcaatataaatatgagaaatgctaaaatgacttacattgtgaaa 16
Query: 157 cggaggaagtat 168
||||||||||||
Sbjct: 15 cggaggaagtat 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagtat 168
||||||||| ||||||||||| ||| ||||| ||||||||||||||| |||||
Sbjct: 87 aatatgaatgtggaaaatgctaaaatgacttatattgtgaaacggagggagtat 140
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||||| ||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 4 ctactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgat 60
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||| ||||||||||||||| ||||||||||||||||||| |||||||||||||||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgat 80
Score = 71.9 bits (36), Expect = 3e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 100 agattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacgg 159
|||||||||| ||| ||||||||| | |||||||||||| ||||| ||||||||||||
Sbjct: 68 agattcattagcatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaacgg 127
Query: 160 aggaagta 167
||||||||
Sbjct: 128 aggaagta 135
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 104 tcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggagga 163
|||||| ||| ||||||||| | |||||||||||| |||||||| ||||||| ||||
Sbjct: 68 tcattagcatcaatatgaatgtgagaaatgctagaatgacttacatcgtgaaacagaggg 9
Query: 164 agta 167
||||
Sbjct: 8 agta 5
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 89.7 bits (45), Expect = 1e-17
Identities = 51/53 (96%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 66
|||| ||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 81.8 bits (41), Expect = 3e-15
Identities = 47/49 (95%)
Strand = Plus / Plus
Query: 21 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
||||||||||||| |||||||||||||||||||||| ||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgat 60
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 114 taatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||| || |||||||||||| ||||| ||||||||||||||||||||
Sbjct: 66 taatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagta 119
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Minus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtgaaacgga 160
|||||||||| || |||||||||||| ||||| |||||||||||||
Sbjct: 57 aatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AAAA02024471.1/543-453 39946:Oryza sativa Indica
Group
Length = 91
Score = 89.7 bits (45), Expect = 1e-17
Identities = 71/79 (89%), Gaps = 3/79 (3%)
Strand = Plus / Minus
Query: 44 ctagcatttcccacattcatattgatattaataaatctagacatatatatctatctagat 103
|||||||||||||| ||||||||||||||||| |||||||| |||||||||||||||
Sbjct: 91 ctagcatttcccacgttcatattgatattaatgaatctaga---ttatatctatctagat 35
Query: 104 tcattaacattaatatgaa 122
||||||| || ||||||||
Sbjct: 34 tcattaatatcaatatgaa 16
Score = 81.8 bits (41), Expect = 3e-15
Identities = 70/79 (88%), Gaps = 3/79 (3%)
Strand = Plus / Plus
Query: 44 ctagcatttcccacattcatattgatattaataaatctagacatatatatctatctagat 103
|||||||||||||| ||||||||||||||||| |||||||| | ||||| ||||||||
Sbjct: 1 ctagcatttcccacgttcatattgatattaatgaatctagatagatata---atctagat 57
Query: 104 tcattaacattaatatgaa 122
||||||| || ||||||||
Sbjct: 58 tcattaatatcaatatgaa 76
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa Japonica
Group
Length = 102
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 40 cattctagcatttcccacattcatattgatattaataaatctagacatatatatctatct 99
||||||||||||| |||||||||||| | | ||||| ||||||||||| ||||| |||||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagacatctatatatatct 60
Query: 100 agattcattaaca 112
|||||||||||||
Sbjct: 61 agattcattaaca 73
Score = 89.7 bits (45), Expect = 1e-17
Identities = 87/101 (86%)
Strand = Plus / Minus
Query: 40 cattctagcatttcccacattcatattgatattaataaatctagacatatatatctatct 99
||||||| |||||||||||||||||| | | ||||| |||||||| ||||||| | |||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctagatatatatagatgtct 43
Query: 100 agattcattaacattaatatgaatagggaaaatgctagaat 140
||||||||||||| |||||||| |||||||||||||||
Sbjct: 42 agattcattaacacctatatgaatgtggaaaatgctagaat 2
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 87.7 bits (44), Expect = 5e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||| | |||||||||| |||||||||| | ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 74 ataaatctagacatatatat 93
|| |||||||||||||||||
Sbjct: 65 atgaatctagacatatatat 84
Score = 73.8 bits (37), Expect = 7e-13
Identities = 70/81 (86%)
Strand = Plus / Minus
Query: 88 atatatctatctagattcattaacattaatatgaatagggaaaatgctagaatcacttac 147
|||||| | ||||||||||||||||| | |||||| ||| |||||||||| |||||
Sbjct: 84 atatatatgtctagattcattaacatctaaatgaatgtggataatgctagaaagtcttac 25
Query: 148 attgtgaaacggaggaagtat 168
|||||||||||||||||||||
Sbjct: 24 attgtgaaacggaggaagtat 4
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 87.7 bits (44), Expect = 5e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||||||||||||||| ||||| |||||||||||||||||||||| ||||||
Sbjct: 5 tactccctccgtttcacaatataagttattctagcatttcccacattcacattgat 60
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttc 53
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttc 87
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagtat 168
|||||||||||| |||||||||||||||||||||||||||
Sbjct: 88 aaatgctagaatgacttacattgtgaaacggaggaagtat 127
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 108 taacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||| ||| ||||| || |||||||||||| ||||| ||||||||||||||| ||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagggagta 5
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa
Indica Group
Length = 140
Score = 87.7 bits (44), Expect = 5e-17
Identities = 71/80 (88%)
Strand = Plus / Plus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||||||||||||||| |||||||||||||||| ||| |||| || ||||| |||||
Sbjct: 3 actactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatat 62
Query: 72 taataaatctagacatatat 91
|||| ||||||||| |||||
Sbjct: 63 taatgaatctagacttatat 82
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||| ||||||||||| ||||||||||||||||||||| | |||||||||| |||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcattgtctacattcatatagatat 79
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 130 aatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||||| ||||||||| ||||||||||||||||
Sbjct: 99 aatgctagaatgacttacattatgaaacggaggaagta 136
Score = 46.1 bits (23), Expect = 2e-04
Identities = 59/71 (83%)
Strand = Plus / Minus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
|||||||||||||| || ||||| ||| || ||| |||||| ||||||||| |||||
Sbjct: 75 tctagattcattaatatctatatgcatatgggcaatattagaatgacttacattatgaaa 16
Query: 157 cggaggaagta 167
|||||| ||||
Sbjct: 15 cggagggagta 5
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 5e-17
Identities = 86/100 (86%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| |||| ||| | |||||||||| ||||||||||| | ||| |||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacat 113
|| |||||| ||| |||||| | |||||||||||||||||
Sbjct: 65 atgaatctaaacacatatatatgtctagattcattaacat 104
Score = 85.7 bits (43), Expect = 2e-16
Identities = 127/155 (81%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
|||||||||||||||||||||||||| | ||||| |||| || | | | || ||| ||
Sbjct: 159 ctactccctccgtttcacaatgtaagactttctaacattgcctatgtacccatagatgtt 100
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| ||||||||||||||||| | | ||||||||||||||| | |||||| || |||
Sbjct: 99 aatgaatctagacatatatatgtgtttagattcattaacatctaaatgaatgtgggtaat 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
||||||| ||| |||| ||||||||||||||||
Sbjct: 39 gctagaaagtcttgcattatgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 85.7 bits (43), Expect = 2e-16
Identities = 70/79 (88%)
Strand = Plus / Minus
Query: 90 atatctatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacat 149
|||||| ||||||||||||||||||||| | |||| | ||||||||| ||| ||||| ||
Sbjct: 82 atatctgtctagattcattaacattaatgtaaatatgaaaaatgctaaaatgacttatat 23
Query: 150 tgtgaaacggaggaagtat 168
||||||||||| |||||||
Sbjct: 22 tgtgaaacggaagaagtat 4
Score = 56.0 bits (28), Expect = 2e-07
Identities = 43/48 (89%)
Strand = Plus / Minus
Query: 18 ccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||||||||||||||| ||||||||| || ||||| |||||||||||
Sbjct: 126 ccctccgtttcacaatataagtcattttaacatttttcacattcatat 79
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 21 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatattaataaatc 80
||||||||||||| ||||||||| |||||||| || ||| | ||| || ||||| ||||
Sbjct: 12 tccgtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatc 71
Query: 81 tagacatatat 91
|||||| ||||
Sbjct: 72 tagacagatat 82
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacatt 60
||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattttccacatt 70
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattc 61
|||||||||||||||||||||||| ||||||||||||||||| ||| ||||
Sbjct: 2 tactactccctccgtttcacaatgcaagtcattctagcattttccatattc 52
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 126 ggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||||||||| ||||||||||||||||||||| ||||
Sbjct: 75 ggaaaatgctagaatgacttacattgtgaaacggagggagta 116
Score = 63.9 bits (32), Expect = 7e-10
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 120 gaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
||||| ||||||||||||||| |||| |||||||||||||||| ||||
Sbjct: 52 gaatatggaaaatgctagaatgacttgcattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 85.7 bits (43), Expect = 2e-16
Identities = 95/111 (85%), Gaps = 1/111 (0%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt- 72
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| ||| ||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatatagatgtta 64
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaat 123
||| |||||||||| || || ||||||||||||||||||| ||||||||
Sbjct: 65 aattaatctagacacctacatatatctagattcattaacatctatatgaat 115
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| ||| |||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 74 ataaatctagacatat 89
|| |||||||| ||||
Sbjct: 99 atgaatctagatatat 84
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 85.7 bits (43), Expect = 2e-16
Identities = 58/63 (92%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| || ||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtt 63
Query: 73 aat 75
|||
Sbjct: 64 aat 66
Score = 77.8 bits (39), Expect = 5e-14
Identities = 57/63 (90%)
Strand = Plus / Minus
Query: 105 cattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaa 164
||||||||||||||| ||| | |||||||||||| |||||||||||||||||||||||
Sbjct: 67 cattaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaa 8
Query: 165 gta 167
|||
Sbjct: 7 gta 5
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatt 51
||||||| |||||| ||||||||||||||||||||||||
Sbjct: 102 ctactccttccgttccacaatgtaagtcattctagcatt 64
Score = 46.1 bits (23), Expect = 2e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 130 aatgctagaatcacttacattgtgaaacgga 160
||||||||||| |||||||||||| ||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacgga 94
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 83.8 bits (42), Expect = 8e-16
Identities = 126/154 (81%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| | | |||| | |||||||||| |||||| |||||| ||| |||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| || ||| ||| |||||| | ||||||||||||| ||| |||||||| || ||||
Sbjct: 65 atgaacctatacacatatatatgtctagattcattagcatctatatgaatgtgggcaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||| | | ||||||||||||||||
Sbjct: 125 ctagaaagtcttataatatgaaacggaggaagta 158
Score = 81.8 bits (41), Expect = 3e-15
Identities = 86/101 (85%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||| | | |||| | |||||||||| ||||||||||||| ||| |
Sbjct: 159 ctacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgct 100
Query: 73 aataaatctagacatatatatctatctagattcattaacat 113
||| ||||||||||||||||| | | ||| |||||||||||
Sbjct: 99 aatgaatctagacatatatatgtgtataggttcattaacat 59
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 83.8 bits (42), Expect = 8e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 63
|||||||||||||||||||||||||||||| ||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttcccgcattcat 54
Score = 79.8 bits (40), Expect = 1e-14
Identities = 43/44 (97%)
Strand = Plus / Plus
Query: 126 ggaaaatgctagaatcacttacattgtgaaacggaggaagtatt 169
||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 67 ggaaaatgctagaatgacttacattgtgaaacggaggaagtatt 110
Score = 73.8 bits (37), Expect = 7e-13
Identities = 43/45 (95%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccaca 58
|||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattttccaca 64
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||| ||||||||||||||||||||| ||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa Japonica
Group
Length = 116
Score = 83.8 bits (42), Expect = 8e-16
Identities = 61/66 (92%), Gaps = 1/66 (1%)
Strand = Plus / Minus
Query: 102 attcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggag 161
|||||||||||| |||||| || | |||||||||||||| ||||||||||||||||||||
Sbjct: 69 attcattaacatcaatatggat-gtgaaaatgctagaatgacttacattgtgaaacggag 11
Query: 162 gaagta 167
||||||
Sbjct: 10 gaagta 5
Score = 75.8 bits (38), Expect = 2e-13
Identities = 57/62 (91%), Gaps = 1/62 (1%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||||||||| ||||| ||||||||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt-tcacatccatattgatgtta 63
Query: 74 at 75
||
Sbjct: 64 at 65
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 18 ccctccgtttcacaatgtaagtcattctagcattt 52
|||||||||||||||||||||||||||||||||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagcattt 74
Score = 63.9 bits (32), Expect = 7e-10
Identities = 35/36 (97%)
Strand = Plus / Plus
Query: 127 gaaaatgctagaatcacttacattgtgaaacggagg 162
|||||||||||||| |||||||||||||||||||||
Sbjct: 72 gaaaatgctagaatgacttacattgtgaaacggagg 107
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 83.8 bits (42), Expect = 8e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||| ||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 74 ataaatctag 83
|| |||||||
Sbjct: 71 atgaatctag 62
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 98 ctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaac 157
|||||||||||| ||| |||||||| | |||||| |||||| ||||||||||||||||
Sbjct: 62 ctagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaac 121
Query: 158 ggaggaagtat 168
||||| |||||
Sbjct: 122 ggagggagtat 132
Score = 65.9 bits (33), Expect = 2e-10
Identities = 45/49 (91%)
Strand = Plus / Plus
Query: 17 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
||||||||||||||||| |||||||||||| |||||| || ||||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
Score = 44.1 bits (22), Expect = 7e-04
Identities = 31/34 (91%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggagg 162
||||| |||||| ||||| |||||||||||||||
Sbjct: 43 aaatgatagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 83.8 bits (42), Expect = 8e-16
Identities = 129/157 (82%), Gaps = 2/157 (1%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| | | |||| | |||||||||| ||||||||||||| ||| |||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 74 ataaatc--tagacatatatatctatctagattcattaacattaatatgaatagggaaaa 131
|| |||| || ||| | |||| ||| ||||||||||||||| |||||||| || ||
Sbjct: 100 atgaatctatacacacacatatatatatagattcattaacatctatatgaatgtgggcaa 41
Query: 132 tgctagaatcacttacattgtgaaacggaggaagtat 168
|||||||| |||| | | |||||||||||||||||
Sbjct: 40 tgctagaaagtcttataatatgaaacggaggaagtat 4
Score = 60.0 bits (30), Expect = 1e-08
Identities = 66/78 (84%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| | | |||| | |||||||||| ||||||||||||| ||| |||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 74 ataaatctagacatatat 91
|| |||||| | ||||||
Sbjct: 65 atgaatctatatatatat 82
>RF00906;MIR1122;AL663019.2/55100-55213 39947:Oryza sativa Japonica
Group
Length = 114
Score = 83.8 bits (42), Expect = 8e-16
Identities = 84/98 (85%)
Strand = Plus / Minus
Query: 42 ttctagcatttcccacattcatattgatattaataaatctagacatatatatctatctag 101
|||||||||| ||||||||||||| ||| ||||| ||||||| ||||||| | | ||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcatatatgtatgcctag 47
Query: 102 attcattaacattaatatgaatagggaaaatgctagaa 139
|||||||||||| ||||||||| || ||||||||||
Sbjct: 46 attcattaacatatatatgaatatgggcaatgctagaa 9
Score = 60.0 bits (30), Expect = 1e-08
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 42 ttctagcatttcccacattcatattgatattaataaatctagacatatatatctatctag 101
|||||||||| |||| |||||||| || ||||| ||||||| |||| |||| | ||||
Sbjct: 9 ttctagcattgcccatattcatatatatgttaatgaatctaggcatacatatatgcctag 68
Query: 102 attcattaacattaatatgaat 123
|||||||||||| ||||||||
Sbjct: 69 attcattaacatctatatgaat 90
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 83.8 bits (42), Expect = 8e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 63
|||||||||||||||||||||||| ||||||||||||||| |||||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcatttctcacattcat 54
Score = 69.9 bits (35), Expect = 1e-11
Identities = 44/47 (93%)
Strand = Plus / Minus
Query: 23 cgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||| ||||||| |||||||| |||||||||||||||||||||||||
Sbjct: 105 cgttccacaatgcaagtcattttagcatttcccacattcatattgat 59
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| | ||||||||||||||||||| ||||
Sbjct: 43 aaatgctagaatgagttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 83.8 bits (42), Expect = 8e-16
Identities = 60/66 (90%)
Strand = Plus / Plus
Query: 17 tccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatattaata 76
||||||||||||||||| ||||||||||||||||||| || || ||||||||||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctagcatttctcatatagatattgatattaatg 67
Query: 77 aatcta 82
||||||
Sbjct: 68 aatcta 73
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||| ||||||||||||||| ||||||||| |||||||| ||||||||| |||||
Sbjct: 137 tacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgat 82
Score = 56.0 bits (28), Expect = 2e-07
Identities = 55/64 (85%)
Strand = Plus / Minus
Query: 99 tagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacg 158
|||||||||||| || ||||| ||| | |||||||||||| ||||| |||||||||||
Sbjct: 73 tagattcattaatatcaatatctatatgagaaatgctagaatgacttatattgtgaaacg 14
Query: 159 gagg 162
||||
Sbjct: 13 gagg 10
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 128 aaaatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||| ||| ||||| ||||||||||||||||||||
Sbjct: 98 aaaatgctaaaatgacttatattgtgaaacggaggaagta 137
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||||||||||||||||| ||||||||| || ||| |||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64
Query: 74 a 74
|
Sbjct: 65 a 65
Score = 65.9 bits (33), Expect = 2e-10
Identities = 54/61 (88%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||| ||||||||| ||||||||| || ||| |||||||| |||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgtta 63
Query: 74 a 74
|
Sbjct: 62 a 62
Score = 60.0 bits (30), Expect = 1e-08
Identities = 54/62 (87%)
Strand = Plus / Plus
Query: 107 ttaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagt 166
||||||| ||||| |||| | |||||||| ||| ||||| |||||||||||||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Query: 167 at 168
||
Sbjct: 122 at 123
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 107 ttaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagt 166
||||||| ||||| |||| | |||||||| ||| ||||||||||||||||||||| |||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagggagt 6
Query: 167 a 167
|
Sbjct: 5 a 5
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
||||||||||||||||||||||||||||||| ||| |||| |||||||||||||||
Sbjct: 4 ctactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgat 60
Score = 69.9 bits (35), Expect = 1e-11
Identities = 50/55 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattga 68
|||||||||| ||||| ||||||||||||||||| |||| ||||||||||||||
Sbjct: 116 tactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
Score = 52.0 bits (26), Expect = 3e-06
Identities = 50/58 (86%)
Strand = Plus / Minus
Query: 110 acattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
|||| ||||||||| | ||||| ||| ||| ||||||||||||||||||||| ||||
Sbjct: 62 acatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa
Japonica Group
Length = 146
Score = 81.8 bits (41), Expect = 3e-15
Identities = 65/73 (89%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| |||||||| | |||||||||| ||||||||||||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 74 ataaatctagaca 86
|| ||| ||||||
Sbjct: 65 atgaatttagaca 77
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||||||||||||||| |||||||| | |||||||||| |||||||||||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatat 91
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Minus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
|||| |||||||||||| |||||||| || |||||||||| |||||||| |||||
Sbjct: 75 tctaaattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaa 16
Query: 157 cggaggaagtat 168
|||||| |||||
Sbjct: 15 cggagggagtat 4
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 35 taagtcattctagcatttcccacattcatattgatattaataaatctagacatatat 91
||||||||||||||||||| ||||||||||||||| |||| |||||||||||||||
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagacatatat 48
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 31 aatgtaagtcattctagcatttcccacattcatattgat 69
||||||||||||||||||||||| |||||||||||||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgat 39
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 81.8 bits (41), Expect = 3e-15
Identities = 50/53 (94%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 66
|||| ||||||||||||||||||||||||| ||| ||||||||||||||||||
Sbjct: 109 tacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 61.9 bits (31), Expect = 3e-09
Identities = 49/55 (89%)
Strand = Plus / Plus
Query: 113 ttaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||||| || |||| ||| ||| ||||||||||||||||||||||||||
Sbjct: 55 ttaatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagta 109
Score = 60.0 bits (30), Expect = 1e-08
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcatt 43
||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
Score = 44.1 bits (22), Expect = 7e-04
Identities = 25/26 (96%)
Strand = Plus / Minus
Query: 142 acttacattgtgaaacggaggaagta 167
||||||||||||||||||||| ||||
Sbjct: 30 acttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 36 aagtcattctagcatttcccacattcatattgatattaataaatctagacatatatatct 95
|||||||||||||||||||||||||||||||||| ||||| ||||||| | ||||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctagatagatatatct 64
Query: 96 a 96
|
Sbjct: 63 a 63
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 36 aagtcattctagcatttcccacattcatattgatattaataaatctaga 84
|||||||||||||||||||||||||||||||||| ||||| |||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctaga 49
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||||||||||| |||| | |||||||||| ||||||| ||||| ||| ||
Sbjct: 137 ctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtt 78
Query: 73 aataaatctagacatat 89
||| |||||| ||||||
Sbjct: 77 aatgaatctaaacatat 61
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 143 cttacattgtgaaacggaggaagtatt 169
|||| ||||||||||||||||||||||
Sbjct: 29 cttatattgtgaaacggaggaagtatt 3
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||||||||||| |||| | |||||||||| ||||||| ||||| ||| ||
Sbjct: 4 ctactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtt 63
Query: 73 aataaatctagacatat 89
||| |||||| ||||||
Sbjct: 64 aatgaatctaaacatat 80
Score = 46.1 bits (23), Expect = 2e-04
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 143 cttacattgtgaaacggaggaagtatt 169
|||| ||||||||||||||||||||||
Sbjct: 112 cttatattgtgaaacggaggaagtatt 138
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 81.8 bits (41), Expect = 3e-15
Identities = 71/81 (87%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||||||| | | |||| | |||||||||| ||||||||||||| || ||
Sbjct: 133 ctactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtt 74
Query: 73 aataaatctagacatatatat 93
||| |||||||||||||||||
Sbjct: 73 aatgaatctagacatatatat 53
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||||||| ||||||||| ||| |||| |||||||||||||||| |||
Sbjct: 130 tacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtta 71
Query: 74 ataaatcta 82
|| ||||||
Sbjct: 70 atgaatcta 62
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 99 tagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacg 158
||||||||||||||| ||||||||| ||||||| ||| ||| ||||| |||||||||||
Sbjct: 62 tagattcattaacatcaatatgaatgtggaaaatactaaaatgacttatattgtgaaacg 121
Query: 159 gaggaagta 167
|||||||||
Sbjct: 122 gaggaagta 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||||||||||||||||||||||||| | | |||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgat 60
Score = 56.0 bits (28), Expect = 2e-07
Identities = 52/60 (86%)
Strand = Plus / Minus
Query: 110 acattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagtatt 169
|||| ||||||||| ||||||| | | ||| ||||||||||||||||||||| ||||||
Sbjct: 62 acatcaatatgaatgtggaaaatacaaaaatgacttacattgtgaaacggagggagtatt 3
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| |||||||| | |||||||||| ||||||||||||| ||| |||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 74 ataaatcta 82
|| ||||||
Sbjct: 80 atgaatcta 72
Score = 50.1 bits (25), Expect = 1e-05
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 99 tagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacg 158
||||||||||||||| |||||||| || |||||||||| |||||||| |||||||
Sbjct: 72 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatgaaacg 131
Query: 159 gaggaagta 167
|||| ||||
Sbjct: 132 gagggagta 140
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 81.8 bits (41), Expect = 3e-15
Identities = 68/77 (88%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||| | |||||||||||||||| ||||| |||||||| ||| ||| |||
Sbjct: 138 tactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgtta 79
Query: 74 ataaatctagacatata 90
| ||||||||||||||
Sbjct: 78 gtgaatctagacatata 62
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||||||||||||||| |||||||||||||||| |||||| |||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaacatttctcacattcatat 56
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
||||| |||||| ||||||||| ||||||||||| ||||
Sbjct: 43 aaatgttagaatgacttacattatgaaacggagggagta 5
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 79.8 bits (40), Expect = 1e-14
Identities = 61/68 (89%)
Strand = Plus / Minus
Query: 21 tccgtttcacaatgtaagtcattctagcatttcccacattcatattgatattaataaatc 80
|||||||||||||||||| | |||||||||| ||||||||||||| |||| |||| |||
Sbjct: 119 tccgtttcacaatgtaagactttctagcattgcccacattcatatggatactaatgaatt 60
Query: 81 tagacata 88
||||||||
Sbjct: 59 tagacata 52
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 130 aatgctagaatcacttacattgtgaaacggaggaagtat 168
|||||||||| |||||||||||||||||| |||||||
Sbjct: 89 aatgctagaaagtcttacattgtgaaacggatgaagtat 127
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||| |||||| ||||||| ||||||||||||| ||||||| ||||| ||| |||
Sbjct: 132 tactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtta 73
Query: 74 ataaatctagac 85
|| |||||||||
Sbjct: 72 atgaatctagac 61
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
||||| ||||||||||| ||||||||||||||||||||| |||| || |||||
Sbjct: 4 ctacttcctccgtttcataatgtaagtcattctagcattacccatatgcatat 56
Score = 60.0 bits (30), Expect = 1e-08
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 130 aatgctagaatcacttacattgtgaaacggaggaagta 167
||||||||||| ||||||||| ||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggaggaagta 5
Score = 50.1 bits (25), Expect = 1e-05
Identities = 61/73 (83%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||||||||||| ||||| || || ||||||||||| | ||||||| |||||
Sbjct: 62 tctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaa 121
Query: 157 cggaggaagtatt 169
| |||| ||||||
Sbjct: 122 cagagggagtatt 134
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 70/80 (87%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||| |||||| |||||||| | |||||||||| |||||||||||| ||| |||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 74 ataaatctagacatatatat 93
|| ||||||||||| |||||
Sbjct: 72 atgaatctagacatctatat 53
Score = 54.0 bits (27), Expect = 7e-07
Identities = 60/71 (84%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||||||||||| |||||||| ||| |||||||||| |||||||| |||||
Sbjct: 62 tctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 121
Query: 157 cggaggaagta 167
| |||| ||||
Sbjct: 122 cagagggagta 132
Score = 48.1 bits (24), Expect = 4e-05
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||| ||||| ||||| |||||||| | |||||||||| ||||||||||||
Sbjct: 5 tacttcctccttttcataatgtaagactttctagcattgtccacattcatat 56
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 77.8 bits (39), Expect = 5e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcata 64
|||| ||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 117 tatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagtat 168
||||||| ||||||| ||||||| |||||||||||||||||||||||||||
Sbjct: 55 tatgaatgtggaaaatactagaatgacttacattgtgaaacggaggaagtat 4
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
||||||| ||||||||||||||| ||||||||||||| ||||| | ||| ||||| |
Sbjct: 142 tactacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattg 83
Query: 71 ttaataaatctagacatata 90
||||| ||||||||||||||
Sbjct: 82 ttaatgaatctagacatata 63
Score = 61.9 bits (31), Expect = 3e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
|||||||||||||||| | ||||| || | |||| ||||||| ||||| |||||||||
Sbjct: 69 tctagattcattaacaattatatggatgagagaaatcctagaatgacttatattgtgaaa 128
Query: 157 cggaggaagta 167
|||||||||||
Sbjct: 129 cggaggaagta 139
>RF00906;MIR1122;AAAA02020840.1/4681-4804 39946:Oryza sativa Indica
Group
Length = 124
Score = 77.8 bits (39), Expect = 5e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||||||||||||||||||||||||||| |||||||||| |||||||||||||
Sbjct: 123 tactactccctccgtttcacaatgtaagagtttctagcattgcccacattcatat 69
Score = 63.9 bits (32), Expect = 7e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||| |||||||||||||||||||| | ||||||| || |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcgttgcccacattcatat 56
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 130 aatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||| | |||||||||||||||||||| ||||
Sbjct: 83 aatgctagaaactcttacattgtgaaacggagggagta 120
Score = 50.1 bits (25), Expect = 1e-05
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 143 cttacattgtgaaacggaggaagta 167
|||||||||||||||||||||||||
Sbjct: 29 cttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 77.8 bits (39), Expect = 5e-14
Identities = 60/67 (89%)
Strand = Plus / Plus
Query: 102 attcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaacggag 161
|||||||||||| ||||| || | ||||||||||||| ||||||||||||||||||||
Sbjct: 66 attcattaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggag 125
Query: 162 gaagtat 168
|||||||
Sbjct: 126 gaagtat 132
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||||||||||||||||| ||| || |||||||| |||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 74 at 75
||
Sbjct: 71 at 70
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcattt 52
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattt 43
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Minus
Query: 127 gaaaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||| ||| ||||||||||||||||||||| ||||
Sbjct: 45 gaaaatgctaaaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 77.8 bits (39), Expect = 5e-14
Identities = 63/71 (88%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||| ||||| |||||||| | |||||||||| |||||||||||| ||| |||
Sbjct: 5 tactccctccatttcataatgtaagactttctagcattgtccacattcatatagatgtta 64
Query: 74 ataaatctaga 84
|||||||||||
Sbjct: 65 ataaatctaga 75
Score = 52.0 bits (26), Expect = 3e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatt 51
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 124 tactccctccgtttcataatgtaagactttctagcatt 87
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 75.8 bits (38), Expect = 2e-13
Identities = 56/62 (90%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||| |||||||||||| |||| |||||| ||||||||||||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatatta 49
Query: 74 at 75
||
Sbjct: 48 at 47
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattcta 46
|||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcta 37
Score = 58.0 bits (29), Expect = 4e-08
Identities = 38/41 (92%)
Strand = Plus / Plus
Query: 128 aaaatgctagaatcacttacattgtgaaacggaggaagtat 168
||||| ||||||| |||| ||||||||||||||||||||||
Sbjct: 69 aaaatactagaatgacttgcattgtgaaacggaggaagtat 109
Score = 50.1 bits (25), Expect = 1e-05
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 135 tagaatcacttacattgtgaaacggaggaagta 167
|||||| ||||||||||||||||||||| ||||
Sbjct: 37 tagaatgacttacattgtgaaacggagggagta 5
>RF00906;MIR1122;AL662959.3/120503-120618 39947:Oryza sativa
Japonica Group
Length = 116
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Minus
Query: 48 catttcccacattcatattgatattaataaatctagacatatatat 93
|||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 112 catttcccacattcatattgatgctaataaatctagacatatatat 67
Score = 60.0 bits (30), Expect = 1e-08
Identities = 42/46 (91%)
Strand = Plus / Plus
Query: 48 catttcccacattcatattgatattaataaatctagacatatatat 93
|||||||||||||||||||||| |||| || ||||||||||||||
Sbjct: 5 catttcccacattcatattgatgctaatgaaactagacatatatat 50
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 59
|||| |||||||| ||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcatttcccacat 50
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagc 48
|||||||||||||||||||||||||||||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattctagc 60
Score = 63.9 bits (32), Expect = 7e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagtat 168
|||||||||||| |||||||||||| ||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtggaacggaggaagtat 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 33/35 (94%)
Strand = Plus / Plus
Query: 133 gctagaatcacttacattgtgaaacggaggaagta 167
|||||||| ||||||||||||||||||||| ||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagggagta 94
>RF00906;MIR1122;AACV01004004.1/73579-73692 39947:Oryza sativa
Japonica Group
Length = 114
Score = 75.8 bits (38), Expect = 2e-13
Identities = 83/98 (84%)
Strand = Plus / Minus
Query: 42 ttctagcatttcccacattcatattgatattaataaatctagacatatatatctatctag 101
|||||||||| ||||||||||||| ||| ||||| ||||||| || | ||| | |||||
Sbjct: 106 ttctagcattgcccacattcatatagatgttaatgaatctaggcacacatacatgtctag 47
Query: 102 attcattaacattaatatgaatagggaaaatgctagaa 139
|||||||||||| |||||||| ||| ||||||||||
Sbjct: 46 attcattaacatatatatgaatgtggacaatgctagaa 9
Score = 60.0 bits (30), Expect = 1e-08
Identities = 69/82 (84%)
Strand = Plus / Plus
Query: 42 ttctagcatttcccacattcatattgatattaataaatctagacatatatatctatctag 101
|||||||||| |||||||||||| || ||||| ||||||||||| ||| | | ||||
Sbjct: 9 ttctagcattgtccacattcatatatatgttaatgaatctagacatgtatgtgtgcctag 68
Query: 102 attcattaacattaatatgaat 123
|||||||||||| ||||||||
Sbjct: 69 attcattaacatctatatgaat 90
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| |||||||| | |||||||||| ||||||| ||||| ||| |||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 74 ataaatctag 83
|| |||||||
Sbjct: 87 atgaatctag 78
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Plus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||||| |||||||||||||||||||| | |||||||||| | |||||||| | ||| |
Sbjct: 3 actacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgt 62
Query: 72 taataaatctagaca 86
|||| ||||||||||
Sbjct: 63 taatgaatctagaca 77
>RF00906;MIR1122;AP000492.1/101668-101829 39947:Oryza sativa
Japonica Group
Length = 162
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 42 ttctagcatttcccacattcatattgatattaataaatctagacatatatatctatctag 101
|||| ||||| ||||||||||||| || ||||||||||||||||||||||| | | ||
Sbjct: 33 ttctggcattgcccacattcatatatatgttaataaatctagacatatatatgtgccaag 92
Query: 102 attcattaacattaatatgaat 123
|||||||||||| ||||||||
Sbjct: 93 attcattaacatatatatgaat 114
Score = 61.9 bits (31), Expect = 3e-09
Identities = 91/111 (81%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||| ||||||||||| | |||| | |||||||||| ||||||||||||| || ||
Sbjct: 159 ctactacctccgtttcaagttataagactttctagcattgcccacattcatatatatgtt 100
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaat 123
||| ||||| | || |||||| | |||||||| |||||||| ||||||||
Sbjct: 99 aatgaatcttggcacatatatatgtctagatttattaacatatatatgaat 49
>RF00906;MIR1122;AP000570.1/734-847 39947:Oryza sativa Japonica
Group
Length = 114
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Plus
Query: 42 ttctagcatttcccacattcatattgatattaataaatctagacatatatatctatctag 101
||||||||| ||||||||||||| ||| ||||| |||||||||| |||||| | |||||
Sbjct: 9 ttctagcatcacccacattcatatagatgttaatgaatctagacacatatatatgtctag 68
Query: 102 attcattaacattaatatgaat 123
||||||| |||| ||||||||
Sbjct: 69 attcatttacatctatatgaat 90
Score = 75.8 bits (38), Expect = 2e-13
Identities = 71/82 (86%)
Strand = Plus / Minus
Query: 42 ttctagcatttcccacattcatattgatattaataaatctagacatatatatctatctag 101
||||||||| | ||||||||||| ||| | ||| ||||||||||||||||| | |||||
Sbjct: 106 ttctagcatcacacacattcatatagatgtaaatgaatctagacatatatatgtgtctag 47
Query: 102 attcattaacattaatatgaat 123
|||||||||||| ||||||||
Sbjct: 46 attcattaacatctatatgaat 25
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 73.8 bits (37), Expect = 7e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 66
|||| ||||||||||||||||||||| ||| ||| ||||||||||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 60.0 bits (30), Expect = 1e-08
Identities = 48/54 (88%)
Strand = Plus / Plus
Query: 114 taatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||| || |||| ||| ||| ||||||||||||||||||||||||||
Sbjct: 87 taatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagta 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatt 66
|||| ||||||||||||||||||||| ||| || ||||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagttattgtataatttctcacattcatatt 57
Score = 52.0 bits (26), Expect = 3e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 142 acttacattgtgaaacggaggaagta 167
||||||||||||||||||||||||||
Sbjct: 30 acttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa
Indica Group
Length = 93
Score = 73.8 bits (37), Expect = 7e-13
Identities = 40/41 (97%)
Strand = Plus / Minus
Query: 20 ctccgtttcacaatgtaagtcattctagcatttcccacatt 60
||||||||||||||||||||||||||||||||||| |||||
Sbjct: 83 ctccgtttcacaatgtaagtcattctagcatttcctacatt 43
Score = 61.9 bits (31), Expect = 3e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 134 ctagaatcacttacattgtgaaacggaggaagtat 168
||||||| |||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagtat 4
Score = 61.9 bits (31), Expect = 3e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| |||||||||||||||||||| |||||
Sbjct: 51 aaatgctagaatgacttacattgtgaaacggagtaagta 89
Score = 60.0 bits (30), Expect = 1e-08
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctag 47
|||| |||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag 38
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 73.8 bits (37), Expect = 7e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattc 61
||||| ||||||||||||||||||||||||||||||| || ||||||||
Sbjct: 4 ctacttcctccgtttcacaatgtaagtcattctagcactttccacattc 52
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 126 ggaaaatgctagaatcacttacattgtgaaacggaggaagta 167
||||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 46 ggaaagtgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 71.9 bits (36), Expect = 3e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||||||||||||||| |||||||| | |||||||||| |||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatat 56
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| ||||||| | || ||||||| ||||||||||||| ||| |||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtta 83
Query: 74 ataaatctagaca 86
|| ||| ||||||
Sbjct: 82 atgaatttagaca 70
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 71.9 bits (36), Expect = 3e-12
Identities = 84/100 (84%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||| | |||||||||| | ||||| ||||| ||| |||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtta 99
Query: 74 ataaatctagacatatatatctatctagattcattaacat 113
|| |||||| ||| || || | |||| ||||||||||||
Sbjct: 98 atgaatctaaacacgtacatatgtctatattcattaacat 59
Score = 67.9 bits (34), Expect = 4e-11
Identities = 124/154 (80%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||| |||||||||| | || || ||| || |||||||| | ||| |||
Sbjct: 5 tacttcctccgttttacaatgtaagactttttaatattgcctacattcatttagatgtta 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||| ||||||||| || | | ||||||||||||||| ||||| || | ||||
Sbjct: 65 atgaatatagacatatgtacgtgtttagattcattaacatctatatgtatgtgagcaatg 124
Query: 134 ctagaatcacttacattgtgaaacggaggaagta 167
|||||| |||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattgtgaaacggaggaagta 158
>RF00906;MIR1122;AAAA02028024.1/19895-19754 39946:Oryza sativa
Indica Group
Length = 142
Score = 71.9 bits (36), Expect = 3e-12
Identities = 69/80 (86%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| | | |||| | ||||| |||| ||||||||||||| ||| ||
Sbjct: 138 tactccctccgtttcatattataagactttctatcattgcccacattcatatagatgcta 79
Query: 74 ataaatctagacatatatat 93
|| |||||||||||||||||
Sbjct: 78 atgaatctagacatatatat 59
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 71.9 bits (36), Expect = 3e-12
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttc 53
|||| |||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttc 44
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| ||||||||||||||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagta 5
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa
Japonica Group
Length = 97
Score = 71.9 bits (36), Expect = 3e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||| ||||||||| ||||| ||||||||||||||||||| |||||| ||||||||
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatattgat 38
Score = 56.0 bits (28), Expect = 2e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagtat 168
|||||||||||| ||||| ||||| |||||||||||||||
Sbjct: 55 aaatgctagaatgacttatattgtaaaacggaggaagtat 94
Score = 44.1 bits (22), Expect = 7e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcatt 43
||||| |||||||||||||| |||||||||
Sbjct: 5 tactctctccgtttcacaatataagtcatt 34
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 71.9 bits (36), Expect = 3e-12
Identities = 66/76 (86%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||||||||||||||||||| | || |||| || ||||||||||| | ||| |||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 74 ataaatctagacatat 89
|| |||||||||||||
Sbjct: 65 atgaatctagacatat 80
Score = 67.9 bits (34), Expect = 4e-11
Identities = 128/159 (80%), Gaps = 4/159 (2%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatt 72
||||||||||||||||||||| |||| | || ||||| | ||||||| |||| ||| ||
Sbjct: 155 ctactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtt 96
Query: 73 aataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaat 132
||| |||||| | | |||| |||| ||||||||||||| | |||||| || ||
Sbjct: 95 aatgaatctaaatacatatgtcta----gattcattaacatctaaatgaatgtgggcaac 40
Query: 133 gctagaatcacttacattgtgaaacggaggaagtattgt 171
|||| || |||||||||||||||||||||||||||||
Sbjct: 39 gctacaaagtcttacattgtgaaacggaggaagtattgt 1
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||| ||||||||||||| ||||| |||||||| || ||| ||||||||| ||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatacta 47
Query: 74 ataaatctaga 84
|| ||||||||
Sbjct: 46 atgaatctaga 36
Score = 58.0 bits (29), Expect = 4e-08
Identities = 62/73 (84%)
Strand = Plus / Plus
Query: 95 tatctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtga 154
||||||||||||||| || ||||| |||| | ||||||||| ||| | |||||||||||
Sbjct: 34 tatctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtga 93
Query: 155 aacggaggaagta 167
|| ||||| ||||
Sbjct: 94 aatggagggagta 106
Score = 56.0 bits (28), Expect = 2e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 142 acttacattgtgaaacggaggaagtatt 169
||||||||||||||||||||||||||||
Sbjct: 30 acttacattgtgaaacggaggaagtatt 3
Score = 52.0 bits (26), Expect = 3e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcatt 43
|||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 69.9 bits (35), Expect = 1e-11
Identities = 65/75 (86%)
Strand = Plus / Minus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
|||| ||||||||||||| |||||||| | |||||||||| |||||||||||| ||| |
Sbjct: 110 actattccctccgtttcataatgtaagactttctagcattgtccacattcatatagatgt 51
Query: 72 taataaatctagaca 86
||| ||||||||||
Sbjct: 50 taacgaatctagaca 36
Score = 52.0 bits (26), Expect = 3e-06
Identities = 56/66 (84%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||| ||||||| |||||||| ||| |||||||||| |||||||| |||||
Sbjct: 38 tctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaa 97
Query: 157 cggagg 162
||||||
Sbjct: 98 cggagg 103
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcattt 52
|||||||||||||||||||||||| ||||||||||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcattt 66
Score = 60.0 bits (30), Expect = 1e-08
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 128 aaaatgctagaatcacttacattgtgaaacggaggaagtatt 169
||||||||||||| | ||||||||||||||||||| ||||||
Sbjct: 65 aaaatgctagaatgatttacattgtgaaacggagggagtatt 106
Score = 54.0 bits (27), Expect = 7e-07
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcattt 52
|||||||| ||||||||||| ||||||||||||| ||||
Sbjct: 5 tactcccttcgtttcacaatataagtcattctagtattt 43
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 69.9 bits (35), Expect = 1e-11
Identities = 71/83 (85%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
||||||||||||||||||||||||| |||||||||| ||||||| | || ||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgtta 64
Query: 74 ataaatctagacatatatatcta 96
|| |||||| ||||||| |||||
Sbjct: 65 atgaatctaaacatatacatcta 87
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Minus
Query: 130 aatgctagaatcacttacattgtgaaacggaggaagtat 168
|||||||||| |||||||||||||||||||| |||||
Sbjct: 42 aatgctagaaaatcttacattgtgaaacggagggagtat 4
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 67.9 bits (34), Expect = 4e-11
Identities = 103/126 (81%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| | | |||| | ||||| |||| ||||||||||||| || | |
Sbjct: 5 tacttcctccgtttcatattataagactttctaacattgcccacattcatatatatgtca 64
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaatagggaaaatg 133
|| ||||||||||||||||| | | |||||||||| |||| ||||||| | ||| |||
Sbjct: 65 atgaatctagacatatatatgtgtttagattcattgacatctatatgaagatggacaatt 124
Query: 134 ctagaa 139
||||||
Sbjct: 125 ctagaa 130
Score = 52.0 bits (26), Expect = 3e-06
Identities = 89/110 (80%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| | | |||| | |||||| ||| ||| ||||||| ||| | |
Sbjct: 158 tactccctccgtttcatattataagactttctagaattgtccatcttcatatagatgtca 99
Query: 74 ataaatctagacatatatatctatctagattcattaacattaatatgaat 123
|| |||||| ||| |||||| | |||||||||||| |||| ||||||||
Sbjct: 98 atgaatctaaacacatatatatgtctagattcattgacatatatatgaat 49
>RF00906;MIR1122;BX649219.2/156146-156263 4530:Oryza sativa (rice)
Length = 118
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| |||| ||||||||||||||| | ||||||| || ||||||||||||| |||||||
Sbjct: 114 tacttcctctgtttcacaatgtaagactttctagcgttgcccacattcatatagatatta 55
Query: 74 at 75
||
Sbjct: 54 at 53
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 67.9 bits (34), Expect = 4e-11
Identities = 34/34 (100%)
Strand = Plus / Plus
Query: 36 aagtcattctagcatttcccacattcatattgat 69
||||||||||||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgat 34
Score = 61.9 bits (31), Expect = 3e-09
Identities = 31/31 (100%)
Strand = Plus / Minus
Query: 39 tcattctagcatttcccacattcatattgat 69
|||||||||||||||||||||||||||||||
Sbjct: 87 tcattctagcatttcccacattcatattgat 57
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa
Japonica Group
Length = 143
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacat 59
|||||||||||||||| ||||||||||||||||| |||| ||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagtattttccacat 50
Score = 63.9 bits (32), Expect = 7e-10
Identities = 50/56 (89%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgat 69
|||||||||| ||||| ||| |||||||||||||||||| ||| ||| ||||||||
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatattgat 84
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 126 ggaaaatgctagaatcacttacattgtgaaacggaggaagtat 168
||||||| ||||||| ||||||||| ||||||||||| |||||
Sbjct: 46 ggaaaatactagaatgacttacattatgaaacggagggagtat 4
Score = 54.0 bits (27), Expect = 7e-07
Identities = 48/55 (87%)
Strand = Plus / Plus
Query: 115 aatatgaatagggaaaatgctagaatcacttacattgtgaaacggaggaagtatt 169
||||| |||| ||||||||||||||| ||||| ||| ||||| ||||| ||||||
Sbjct: 87 aatataaatatggaaaatgctagaatgacttatattatgaaatggagggagtatt 141
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 67.9 bits (34), Expect = 4e-11
Identities = 64/74 (86%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||| ||||||||||| | | |||| | |||||||||| ||||||||||||| ||| |||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 67
Query: 74 ataaatctagacat 87
|| |||||||||||
Sbjct: 66 atgaatctagacat 53
Score = 48.1 bits (24), Expect = 4e-05
Identities = 60/72 (83%)
Strand = Plus / Plus
Query: 97 tctagattcattaacattaatatgaatagggaaaatgctagaatcacttacattgtgaaa 156
||||||||||||||||| |||||||| || |||||||||| |||| | | |||||
Sbjct: 56 tctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaa 115
Query: 157 cggaggaagtat 168
||||||||||||
Sbjct: 116 cggaggaagtat 127
Score = 44.1 bits (22), Expect = 7e-04
Identities = 43/50 (86%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 63
|||||||||||||||| | | |||| |||||||||| |||||||||||
Sbjct: 5 tactccctccgtttcatattataagattttctagcattgcccacattcat 54
>RF00906;MIR1122;AP008215.1/18276529-18276660 39947:Oryza sativa
Japonica Group
Length = 132
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Plus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
||||||||||||||||||| | | |||| | |||||||||| ||||||||||||| |
Sbjct: 2 tactactccctccgtttcatattataagactttctagcattgcccacattcatatatacg 61
Query: 71 ttaataaatctagacat 87
||||| |||||||||||
Sbjct: 62 ttaatgaatctagacat 78
>RF00906;MIR1122;AAAA02027724.1/15381-15250 39946:Oryza sativa
Indica Group
Length = 132
Score = 65.9 bits (33), Expect = 2e-10
Identities = 66/77 (85%)
Strand = Plus / Minus
Query: 11 tactactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgata 70
||||||||||||||||||| | | |||| | |||||||||| ||||||||||||| |
Sbjct: 131 tactactccctccgtttcatattataagactttctagcattgcccacattcatatatacg 72
Query: 71 ttaataaatctagacat 87
||||| |||||||||||
Sbjct: 71 ttaatgaatctagacat 55
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 13 ctactccctccgtttcacaatgtaagtcattctagcatttc 53
||||||||| ||||||| |||||||||||||||||||||||
Sbjct: 147 ctactcccttcgtttcataatgtaagtcattctagcatttc 107
Score = 63.9 bits (32), Expect = 7e-10
Identities = 41/44 (93%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccac 57
|||||||||||||||| ||| |||||||||||||||||| ||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcattttccac 48
Score = 54.0 bits (27), Expect = 7e-07
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 126 ggaaaatgctagaatcacttacattgtgaaacggaggaagtat 168
||||||||||||||| ||||| ||| ||||||||||| |||||
Sbjct: 46 ggaaaatgctagaatgacttatattatgaaacggagggagtat 4
Score = 46.1 bits (23), Expect = 2e-04
Identities = 35/39 (89%)
Strand = Plus / Plus
Query: 129 aaatgctagaatcacttacattgtgaaacggaggaagta 167
|||||||||||| ||||||||| ||||||| ||| ||||
Sbjct: 108 aaatgctagaatgacttacattatgaaacgaagggagta 146
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatatta 73
|||||||||||||||| | | |||| | |||||||||| ||||||||| || ||| |||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgtccacattcacatagatgtta 64
Query: 74 ataaatctagaca 86
|||||||||||||
Sbjct: 65 ataaatctagaca 77
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 63/73 (86%)
Strand = Plus / Plus
Query: 12 actactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat 71
||||||||||| |||||| |||||||| | |||||||||| |||||||| ||| ||| |
Sbjct: 3 actactccctcagtttcataatgtaagactttctagcattgcccacatttttatggatgt 62
Query: 72 taataaatctaga 84
|||| ||||||||
Sbjct: 63 taatgaatctaga 75
Score = 56.0 bits (28), Expect = 2e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 14 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 65
|||| ||||| ||||| |||||||| | |||||||||| |||||||||||||
Sbjct: 130 tacttcctccatttcataatgtaagactttctagcattgcccacattcatat 79
