miRNEST 2.0, an integrative microRNA resource :: BLAST
>41439_ptc-MIR396e:mirbase
Length = 145
Score = 141 bits (71), Expect = 1e-34
Identities = 71/71 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttctttgccttgcttaatctgtgtatatatagatcactaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaacttctttgccttgcttaatctgtgtatatatagatcactaca 70
Query: 61 tgtacagctcc 71
|||||||||||
Sbjct: 71 tgtacagctcc 81
Score = 60.0 bits (30), Expect = 4e-10
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 98 gcgccatggaagctcaagaaagctgtggga 127
||||||||||||||||||||||||||||||
Sbjct: 108 gcgccatggaagctcaagaaagctgtggga 137
>41438_ptc-MIR396d:mirbase
Length = 154
Score = 56.0 bits (28), Expect = 7e-09
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttctttgccttgcttaa 36
|||||||||||||||||||||| ||||| |||||||
Sbjct: 11 ttccacagctttcttgaacttccttgccatgcttaa 46
Score = 46.1 bits (23), Expect = 6e-06
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 101 ccatggaagctcaagaaagctgtggga 127
|||||||||||||||||||| ||||||
Sbjct: 120 ccatggaagctcaagaaagccgtggga 146
>41212_ccl-MIR396:mirbase
Length = 277
Score = 52.0 bits (26), Expect = 1e-07
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 98 gcgccatggaagctcaagaaagctgtggga 127
||||||||| ||||||||||||||||||||
Sbjct: 223 gcgccatgggagctcaagaaagctgtggga 252
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 143 ttccacagctttcttgaacttc 164
>41243_csi-MIR396c:mirbase
Length = 178
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttcttt 25
|||||||||||||||||||||||||
Sbjct: 13 ttccacagctttcttgaacttcttt 37
>40726_mtr-MIR396a:mirbase
Length = 93
Score = 50.1 bits (25), Expect = 4e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttcttt 25
|||||||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaacttcttt 30
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gaagctcaagaaagctgtggga 127
||||||||||||||||||||||
Sbjct: 67 gaagctcaagaaagctgtggga 88
>42812_zma-MIR396f:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttctt 24
||||||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaacttctt 25
>42811_zma-MIR396e:mirbase
Length = 166
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttctt 24
||||||||||||||||||||||||
Sbjct: 2 ttccacagctttcttgaacttctt 25
>41661_vvi-MIR396b:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttctt 24
||||||||||||||||||||||||
Sbjct: 14 ttccacagctttcttgaacttctt 37
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 3 ccacagctttcttgaacttc 22
||||||||||||||||||||
Sbjct: 95 ccacagctttcttgaacttc 76
>40476_gma-MIR396d:mirbase
Length = 108
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttctt 24
||||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaacttctt 34
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gaagctcaagaaagctgtggga 127
||||||||||||||||||||||
Sbjct: 76 gaagctcaagaaagctgtggga 97
>40475_gma-MIR396c:mirbase
Length = 117
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttctt 24
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttctt 44
>40474_gma-MIR396b:mirbase
Length = 126
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttctt 24
||||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttctt 44
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gaagctcaagaaagctgtggga 127
||||||||||||||||||||||
Sbjct: 86 gaagctcaagaaagctgtggga 107
>40379_rco-MIR396:mirbase
Length = 124
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttctt 24
||||||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaacttctt 29
>40086_ath-MIR396b:mirbase
Length = 135
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 104 tggaagctcaagaaagctgtggga 127
||||||||||||||||||||||||
Sbjct: 102 tggaagctcaagaaagctgtggga 125
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactt 21
|||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaactt 31
>42584_sbi-MIR396c:mirbase
Length = 162
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttct 23
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttct 43
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 3 ccacagctttcttgaacttctttg 26
||||||||||||||| ||||||||
Sbjct: 141 ccacagctttcttgaccttctttg 118
>42028_osa-MIR396c:mirbase
Length = 141
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttct 23
|||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaacttct 33
>41142_tcc-MIR396e:mirbase
Length = 146
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttct 23
|||||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaacttct 43
>41140_tcc-MIR396c:mirbase
Length = 152
Score = 46.1 bits (23), Expect = 6e-06
Identities = 23/23 (100%)
Strand = Plus / Plus
Query: 105 ggaagctcaagaaagctgtggga 127
|||||||||||||||||||||||
Sbjct: 108 ggaagctcaagaaagctgtggga 130
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactt 21
|||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaactt 41
>41795_bdi-MIR396e:mirbase
Length = 201
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaacttc 53
>41660_vvi-MIR396a:mirbase
Length = 116
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gaagctcaagaaagctgtggga 127
||||||||||||||||||||||
Sbjct: 84 gaagctcaagaaagctgtggga 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttcttt 25
|||||||||||||||||||| ||||
Sbjct: 14 ttccacagctttcttgaactacttt 38
>41437_ptc-MIR396c:mirbase
Length = 102
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaacttc 22
||||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaacttc 32
Score = 40.1 bits (20), Expect = 4e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaacttctt 24
|||||| |||||||||||||||||
Sbjct: 94 ttccacggctttcttgaacttctt 71
>39878_aly-MIR396b:mirbase
Length = 188
Score = 44.1 bits (22), Expect = 2e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 106 gaagctcaagaaagctgtggga 127
||||||||||||||||||||||
Sbjct: 132 gaagctcaagaaagctgtggga 153
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactt 21
|||||||||||||||||||||
Sbjct: 32 ttccacagctttcttgaactt 52
>41189_aqc-MIR396b:mirbase
Length = 89
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactt 21
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactt 21
>40296_bna-MIR396a:mirbase
Length = 117
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactt 21
|||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaactt 21
>39426_pta-MIR396:mirbase
Length = 119
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaactt 21
|||||||||||||||||||||
Sbjct: 17 ttccacagctttcttgaactt 37
>42814_zma-MIR396h:mirbase
Length = 124
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 98 ttccacagctttcttgaact 79
>42813_zma-MIR396g:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 111 ttccacagctttcttgaact 92
>42808_zma-MIR396b:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42807_zma-MIR396a:mirbase
Length = 137
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42583_sbi-MIR396b:mirbase
Length = 128
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42582_sbi-MIR396a:mirbase
Length = 125
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42472_ssp-MIR396:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>42461_sof-MIR396:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>42027_osa-MIR396b:mirbase
Length = 116
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>42026_osa-MIR396a:mirbase
Length = 154
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41794_bdi-MIR396d:mirbase
Length = 152
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41793_bdi-MIR396c:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 33 ttccacagctttcttgaact 52
>41663_vvi-MIR396d:mirbase
Length = 120
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41662_vvi-MIR396c:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41436_ptc-MIR396b:mirbase
Length = 132
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41435_ptc-MIR396a:mirbase
Length = 123
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41242_csi-MIR396b:mirbase
Length = 134
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 20 ttccacagctttcttgaact 39
>41241_csi-MIR396a:mirbase
Length = 153
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41188_aqc-MIR396a:mirbase
Length = 122
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 1 ttccacagctttcttgaact 20
>41139_tcc-MIR396b:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41138_tcc-MIR396a:mirbase
Length = 146
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>41058_ghr-MIR396b:mirbase
Length = 135
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>41057_ghr-MIR396a:mirbase
Length = 136
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>40727_mtr-MIR396b:mirbase
Length = 95
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 6 ttccacagctttcttgaact 25
>40646_lja-MIR396:mirbase
Length = 108
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
>40477_gma-MIR396e:mirbase
Length = 114
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 7 ttccacagctttcttgaact 26
>40473_gma-MIR396a:mirbase
Length = 140
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 21 ttccacagctttcttgaact 40
>40085_ath-MIR396a:mirbase
Length = 151
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 11 ttccacagctttcttgaact 30
>39877_aly-MIR396a:mirbase
Length = 172
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 24 ttccacagctttcttgaact 43
>39741_smo-MIR396:mirbase
Length = 168
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 3 ccacagctttcttgaacttc 22
||||||||||||||||||||
Sbjct: 153 ccacagctttcttgaacttc 134
>39379_pab-MIR396a:mirbase
Length = 100
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 1 ttccacagctttcttgaact 20
||||||||||||||||||||
Sbjct: 16 ttccacagctttcttgaact 35
Score = 40.1 bits (20), Expect = 4e-04
Identities = 20/20 (100%)
Strand = Plus / Plus
Query: 108 agctcaagaaagctgtggga 127
||||||||||||||||||||
Sbjct: 64 agctcaagaaagctgtggga 83
