miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>RF00906;MIR1122;AP008216.1/8796170-8796022 39947:Oryza sativa
Japonica Group
Length = 149
Score = 291 bits (147), Expect = 1e-78
Identities = 147/147 (100%)
Strand = Plus / Minus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 147 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 88
Query: 61 taatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgact 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 87 taatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgact 28
Query: 121 tacattatgaaacggaggaagttctac 147
|||||||||||||||||||||||||||
Sbjct: 27 tacattatgaaacggaggaagttctac 1
Score = 157 bits (79), Expect = 5e-38
Identities = 118/131 (90%)
Strand = Plus / Plus
Query: 8 cctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaa 67
||||||||||| |||||||||||||||||||||| || ||| |||||||||||||| ||
Sbjct: 10 cctccgtttcataatgtaagtcattctagcatttctcacatttatattgatgttaataaa 69
Query: 68 tctagactagatttattaacatcaatataaatgtgagaaatgctagaatgacttacatta 127
||||| ||||||| |||||||||||||| ||| || ||||||||||||||||||||||
Sbjct: 70 tctagtctagattcattaacatcaatatgaatatggaaaatgctagaatgacttacattg 129
Query: 128 tgaaacggagg 138
|||||||||||
Sbjct: 130 tgaaacggagg 140
>RF00906;MIR1122;AAAA02022591.1/58916-58767 39946:Oryza sativa
Indica Group
Length = 150
Score = 208 bits (105), Expect = 2e-53
Identities = 133/141 (94%), Gaps = 1/141 (0%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattctagcattttccatatttatattgatatta 87
Query: 63 atgaatctaga-ctagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||||||||| | ||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 86 atgaatctacatctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 27
Query: 122 acattatgaaacggaggaagt 142
||||| ||||||||| |||||
Sbjct: 26 acattgtgaaacggaagaagt 6
Score = 163 bits (82), Expect = 9e-40
Identities = 119/130 (91%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 10 tccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatc 69
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 70 taga-ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattat 128
|||| |||||| ||||| |||||||||||| || |||||||||||||||||||||| |
Sbjct: 72 tagatgtagattcattaatatcaatataaatatggaaaatgctagaatgacttacattgt 131
Query: 129 gaaacggagg 138
||||||||||
Sbjct: 132 gaaacggagg 141
>RF00906;MIR1122;AP005125.3/150901-150749 39947:Oryza sativa
Japonica Group
Length = 153
Score = 204 bits (103), Expect = 3e-52
Identities = 134/144 (93%), Gaps = 4/144 (2%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 90
Query: 63 atgaatctaga----ctagatttattaacatcaatataaatgtgagaaatgctagaatga 118
||||||||||| ||||||| |||||||||||||| |||||| |||||||||||||||
Sbjct: 89 atgaatctagaatgtctagattcattaacatcaatatgaatgtgggaaatgctagaatga 30
Query: 119 cttacattatgaaacggaggaagt 142
|||||||| |||||||||||||||
Sbjct: 29 cttacattgtgaaacggaggaagt 6
Score = 188 bits (95), Expect = 2e-47
Identities = 129/140 (92%), Gaps = 4/140 (2%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 63 atgaatctaga----ctagatttattaacatcaatataaatgtgagaaatgctagaatga 118
||||||||||| ||||||| |||||||||||||| |||||| |||||||||||||||
Sbjct: 65 atgaatctagacattctagattcattaacatcaatatgaatgtgggaaatgctagaatga 124
Query: 119 cttacattatgaaacggagg 138
|||||||| |||||||||||
Sbjct: 125 cttacattgtgaaacggagg 144
>RF00906;MIR1122;AP008214.1/4654552-4654403 39947:Oryza sativa
Japonica Group
Length = 150
Score = 200 bits (101), Expect = 4e-51
Identities = 132/141 (93%), Gaps = 1/141 (0%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 146 tactccctcggtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 63 atgaatctagac-tagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||||| |||||| |||||| |||||||||||||| |||||| |||||||||||||||||
Sbjct: 86 atgaaactagacatagattcattaacatcaatatgaatgtggaaaatgctagaatgactt 27
Query: 122 acattatgaaacggaggaagt 142
|||||||||||||||||||||
Sbjct: 26 acattatgaaacggaggaagt 6
Score = 176 bits (89), Expect = 6e-44
Identities = 126/137 (91%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 63 atgaatcta-gactagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||||||||| | |||| || |||||||||||||| |||||| ||||||||||||||||||
Sbjct: 65 atgaatctatgtctagtttcattaacatcaatatgaatgtgggaaatgctagaatgactt 124
Query: 122 acattatgaaacggagg 138
||||| |||||| ||||
Sbjct: 125 acattgtgaaaccgagg 141
>RF00906;MIR1122;AP003833.3/128680-128531 39947:Oryza sativa
Japonica Group
Length = 150
Score = 200 bits (101), Expect = 4e-51
Identities = 132/141 (93%), Gaps = 1/141 (0%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||||||||| |||||||||||||||| |||||||| |||
Sbjct: 146 tactccctccgtttcacaatgtaagtcattatagcattttccatatttatattgatatta 87
Query: 63 atgaatctaga-ctagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||||||||| | ||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 86 atgaatctacatctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 27
Query: 122 acattatgaaacggaggaagt 142
||||| ||||||||| |||||
Sbjct: 26 acattgtgaaacggaagaagt 6
Score = 155 bits (78), Expect = 2e-37
Identities = 118/130 (90%), Gaps = 1/130 (0%)
Strand = Plus / Plus
Query: 10 tccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatc 69
|||||||||||||||||||||||||||||||| || |||||||||||||||||||||||
Sbjct: 12 tccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgttaatgaatc 71
Query: 70 taga-ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattat 128
|||| |||||| ||||| |||||||||||| || |||||||| ||||||||||||| |
Sbjct: 72 tagatgtagattcattaatatcaatataaatatggaaaatgctataatgacttacattgt 131
Query: 129 gaaacggagg 138
||||||||||
Sbjct: 132 gaaacggagg 141
>RF00906;MIR1122;AAAA02026649.1/23180-23037 39946:Oryza sativa
Indica Group
Length = 144
Score = 198 bits (100), Expect = 2e-50
Identities = 130/140 (92%), Gaps = 5/140 (3%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||||||| || |||||||||||||| ||| || |||||||||||||||||||
Sbjct: 65 atgaatctaga-----ttcattaacatcaatatgaatatgggaaatgctagaatgactta 119
Query: 123 cattatgaaacggaggaagt 142
||||||||||||||||||||
Sbjct: 120 cattatgaaacggaggaagt 139
Score = 167 bits (84), Expect = 6e-41
Identities = 123/136 (90%), Gaps = 5/136 (3%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 140 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcatattgatgtta 81
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||||||| || |||||||||||||| ||| || |||||||||||||||||||
Sbjct: 80 atgaatctaga-----ttcattaacatcaatatgaatatgggaaatgctagaatgactta 26
Query: 123 cattatgaaacggagg 138
|||| |||||||||||
Sbjct: 25 cattgtgaaacggagg 10
>RF00906;MIR1122;AP008215.1/3976175-3976317 39947:Oryza sativa
Japonica Group
Length = 143
Score = 192 bits (97), Expect = 1e-48
Identities = 129/140 (92%), Gaps = 6/140 (4%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 80
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||||||| ||||| |||||||| |||| || |||||||||||||||||||
Sbjct: 79 atgaatctagacaagattcattaacatgaata------tgggaaatgctagaatgactta 26
Query: 123 cattatgaaacggaggaagt 142
||||||||||||||||||||
Sbjct: 25 cattatgaaacggaggaagt 6
Score = 145 bits (73), Expect = 2e-34
Identities = 120/136 (88%), Gaps = 6/136 (4%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcat------gtta 58
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||| | ||||||| |||||||||||||| ||| || |||||||||||||||||||
Sbjct: 59 atgaatcttgtctagattcattaacatcaatatgaatatgggaaatgctagaatgactta 118
Query: 123 cattatgaaacggagg 138
|||| |||||||||||
Sbjct: 119 cattgtgaaacggagg 134
>RF00906;MIR1122;AAAA02014547.1/9044-9193 39946:Oryza sativa Indica
Group
Length = 150
Score = 192 bits (97), Expect = 1e-48
Identities = 131/141 (92%), Gaps = 1/141 (0%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 63 atgaatctaga-ctagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||| ||||||| ||||| |||||||||||||| |||||| ||||||||||||||||||
Sbjct: 65 atgtatctagatatagatacattaacatcaatatgaatgtgggaaatgctagaatgactt 124
Query: 122 acattatgaaacggaggaagt 142
||||| || ||||||||||||
Sbjct: 125 acattgtggaacggaggaagt 145
Score = 161 bits (81), Expect = 3e-39
Identities = 124/137 (90%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 146 tacttcctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 87
Query: 63 atgaatctaga-ctagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||| ||||| | |||||| |||||||||||||| |||||| |||||||||||||||||
Sbjct: 86 atgtatctatatctagatacattaacatcaatatgaatgtggaaaatgctagaatgactt 27
Query: 122 acattatgaaacggagg 138
||||| |||||||||||
Sbjct: 26 acattgtgaaacggagg 10
>RF00906;MIR1122;AP005590.3/107829-107687 39947:Oryza sativa
Japonica Group
Length = 143
Score = 192 bits (97), Expect = 1e-48
Identities = 129/140 (92%), Gaps = 6/140 (4%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||||||| ||||| |||||||| |||| || |||||||||||||||||||
Sbjct: 65 atgaatctagacaagattcattaacatgaata------tgggaaatgctagaatgactta 118
Query: 123 cattatgaaacggaggaagt 142
||||||||||||||||||||
Sbjct: 119 cattatgaaacggaggaagt 138
Score = 145 bits (73), Expect = 2e-34
Identities = 120/136 (88%), Gaps = 6/136 (4%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||||||||||||||||| |||||||||| ||||
Sbjct: 139 tacttcctccgtttcataatgtaagtcattctagcatttcccatattcat------gtta 86
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||| | ||||||| |||||||||||||| ||| || |||||||||||||||||||
Sbjct: 85 atgaatcttgtctagattcattaacatcaatatgaatatgggaaatgctagaatgactta 26
Query: 123 cattatgaaacggagg 138
|||| |||||||||||
Sbjct: 25 cattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02007033.1/31416-31265 39946:Oryza sativa
Indica Group
Length = 152
Score = 184 bits (93), Expect = 2e-46
Identities = 131/143 (91%), Gaps = 3/143 (2%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||| ||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 148 tactccccccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 89
Query: 63 atgaatcta---gactagatttattaacatcaatataaatgtgagaaatgctagaatgac 119
|||||| || | ||||||| |||||||| |||||||||||| ||||||||||||||||
Sbjct: 88 atgaatatatatgtctagattcattaacattaatataaatgtgggaaatgctagaatgac 29
Query: 120 ttacattatgaaacggaggaagt 142
||||||| |||||||||||||||
Sbjct: 28 ttacattgtgaaacggaggaagt 6
Score = 163 bits (82), Expect = 9e-40
Identities = 123/136 (90%), Gaps = 3/136 (2%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| ||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacatttatattaatgtta 64
Query: 63 atgaatctagac---tagatttattaacatcaatataaatgtgagaaatgctagaatgac 119
|||||||||||| || ||| |||||||||||||| |||||| ||||||||||||||||
Sbjct: 65 atgaatctagacatatatattcattaacatcaatatgaatgtgggaaatgctagaatgac 124
Query: 120 ttacattatgaaacgg 135
||||||| ||||||||
Sbjct: 125 ttacattgtgaaacgg 140
>RF00906;MIR1122;AP005731.3/38189-38042 39947:Oryza sativa Japonica
Group
Length = 148
Score = 182 bits (92), Expect = 9e-46
Identities = 129/140 (92%), Gaps = 1/140 (0%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||| ||||||||||||| ||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagccattctagcatttcccacattcatattgatgttc 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||| | | |||||||||| ||||||||||| |||||| |||||||||||||||||||
Sbjct: 65 atgaattt-gtctagatttatgaacatcaatatgaatgtgggaaatgctagaatgactta 123
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 124 cattgtgaaacggaggaagt 143
Score = 161 bits (81), Expect = 3e-39
Identities = 130/145 (89%), Gaps = 1/145 (0%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 144 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgttc 85
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| ||||||||| | ||| || ||||||||||| |||||| |||||||||||||| ||||
Sbjct: 84 ataaatctagac-aaattcatgaacatcaatatgaatgtgggaaatgctagaatggctta 26
Query: 123 cattatgaaacggaggaagttctac 147
|||| ||||||||||| ||| ||||
Sbjct: 25 cattgtgaaacggagggagtactac 1
>RF00906;MIR1122;AL731615.4/29247-29098 39947:Oryza sativa Japonica
Group
Length = 150
Score = 176 bits (89), Expect = 6e-44
Identities = 126/137 (91%), Gaps = 1/137 (0%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||| |||||| |||||||||||||||||| | ||||||||||||||||||
Sbjct: 146 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 87
Query: 63 atgaatctaga-ctagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||||||||||| ||||||| |||||||||||||| |||||| |||||| || ||||||||
Sbjct: 86 atgaatctagatctagattcattaacatcaatatgaatgtgggaaatggtaaaatgactt 27
Query: 122 acattatgaaacggagg 138
|||||||||||||||||
Sbjct: 26 acattatgaaacggagg 10
Score = 153 bits (77), Expect = 8e-37
Identities = 126/141 (89%), Gaps = 1/141 (0%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||||||||||||| || ||||| ||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 64
Query: 63 atgaatctaga-ctagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||||||||||| ||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 65 atgaatctagatctagattcattaacatcaatatgaatatagtaaatgctagaatgactt 124
Query: 122 acattatgaaacggaggaagt 142
| ||| || ||||||||||||
Sbjct: 125 atattgtggaacggaggaagt 145
>RF00906;MIR1122;AP008210.1/12565127-12564978 39947:Oryza sativa
Japonica Group
Length = 150
Score = 176 bits (89), Expect = 6e-44
Identities = 126/137 (91%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||| |||||| |||||||||||||||||| | ||||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatataagtcattctagcatttactatattcatattgatgtta 64
Query: 63 atgaatctaga-ctagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||||||||||| ||||||| |||||||||||||| |||||| |||||| || ||||||||
Sbjct: 65 atgaatctagatctagattcattaacatcaatatgaatgtgggaaatggtaaaatgactt 124
Query: 122 acattatgaaacggagg 138
|||||||||||||||||
Sbjct: 125 acattatgaaacggagg 141
Score = 153 bits (77), Expect = 8e-37
Identities = 126/141 (89%), Gaps = 1/141 (0%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||||||||||||| || ||||| ||| ||||||||||||||||
Sbjct: 146 tactccctccgtttcataatgtaagtcattttaccatttcccacattcatattgatgtta 87
Query: 63 atgaatctaga-ctagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||||||||||| ||||||| |||||||||||||| ||| | |||||||||||||||||
Sbjct: 86 atgaatctagatctagattcattaacatcaatatgaatatagtaaatgctagaatgactt 27
Query: 122 acattatgaaacggaggaagt 142
| ||| || ||||||||||||
Sbjct: 26 atattgtggaacggaggaagt 6
>RF00906;MIR1122;AACV01003962.1/1704-1543 39947:Oryza sativa
Japonica Group
Length = 162
Score = 176 bits (89), Expect = 6e-44
Identities = 135/153 (88%), Gaps = 13/153 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||| | ||||||| |||||||||||||| |||||| ||||||
Sbjct: 65 atgaatctatacatatatatttatctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
||||||||||||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagt 157
Score = 129 bits (65), Expect = 1e-29
Identities = 126/149 (84%), Gaps = 13/149 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| |||||| |||||||||||||| ||| || |||||
Sbjct: 98 atgaatctagataaatatatatgtatagattcattaacatcaatatgaatatggaaaatg 39
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02031088.1/15871-15728 39946:Oryza sativa
Indica Group
Length = 144
Score = 174 bits (88), Expect = 2e-43
Identities = 127/140 (90%), Gaps = 5/140 (3%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| |||||||||||||||||||||| ||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcattttccacattcatattgatgtta 81
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||||| || ||||||||| ||||| |||||| |||||||||||||||||||
Sbjct: 80 atgaatctatac-----atattaacattaatatgaatgtgggaaatgctagaatgactta 26
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagt 6
Score = 133 bits (67), Expect = 8e-31
Identities = 120/136 (88%), Gaps = 5/136 (3%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| || || |||||| |||||||||||||| |||||| ||||||||||||||||||
Sbjct: 65 at--atgta---tagattcattaacatcaatatgaatgtggaaaatgctagaatgactta 119
Query: 123 cattatgaaacggagg 138
||| |||||||||||
Sbjct: 120 tattgtgaaacggagg 135
>RF00906;MIR1122;AACV01010803.1/31756-31905 39947:Oryza sativa
Japonica Group
Length = 150
Score = 172 bits (87), Expect = 9e-43
Identities = 127/139 (91%), Gaps = 1/139 (0%)
Strand = Plus / Minus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||||||||||||||||||||||||| |||||||||||||||| | |||||||||||||
Sbjct: 148 gttactccctccgtttcacaatgtaaatcattctagcattttctacattcatattgatgc 89
Query: 61 taatgaatctaga-ctagatttattaacatcaatataaatgtgagaaatgctagaatgac 119
|||||||| |||| ||||||| |||| ||||||||||||| ||| |||| ||||||||||
Sbjct: 88 taatgaatttagatctagattcattagcatcaatataaatatgaaaaatactagaatgac 29
Query: 120 ttacattatgaaacggagg 138
||||||| |||||||||||
Sbjct: 28 ttacattgtgaaacggagg 10
Score = 153 bits (77), Expect = 8e-37
Identities = 123/137 (89%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||||||||||||| ||||| |||||| ||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttttcatatttatattgatgcta 64
Query: 63 atgaatctaga-ctagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||||||||||| ||| ||| |||| ||||||||| ||||| |||||||||||||| ||
Sbjct: 65 atgaatctagatctaaattcattagcatcaatatgaatgtagaaaatgctagaatgattt 124
Query: 122 acattatgaaacggagg 138
||||| |||||||||||
Sbjct: 125 acattgtgaaacggagg 141
>RF00906;MIR1122;AAAA02023191.1/5200-5048 39946:Oryza sativa Indica
Group
Length = 153
Score = 170 bits (86), Expect = 4e-42
Identities = 128/140 (91%), Gaps = 4/140 (2%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 63 atgaatcta---gac-tagatttattaacatcaatataaatgtgagaaatgctagaatga 118
||||||||| ||| ||| || |||||||||||||| ||||||||||||||||||||||
Sbjct: 65 atgaatctatgtgacatagtttcattaacatcaatatgaatgtgagaaatgctagaatga 124
Query: 119 cttacattatgaaacggagg 138
|||||||| |||||| ||||
Sbjct: 125 cttacattgtgaaaccgagg 144
Score = 163 bits (82), Expect = 9e-40
Identities = 130/144 (90%), Gaps = 4/144 (2%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||
Sbjct: 149 tactccctcggtttcacaatgtaagtcattctagcatttctcacattcatattgatgtta 90
Query: 63 atgaatctag---ac-tagatttattaacatcaatataaatgtgagaaatgctagaatga 118
||||| ||| || |||||| |||||||||||||| |||||| ||||||||||||||
Sbjct: 89 atgaaactatgtcacatagattcattaacatcaatatgaatgtggaaaatgctagaatga 30
Query: 119 cttacattatgaaacggaggaagt 142
||||||||||||||||||||||||
Sbjct: 29 cttacattatgaaacggaggaagt 6
>RF00906;MIR1122;AAAA02022229.1/19711-19563 39946:Oryza sativa
Indica Group
Length = 149
Score = 170 bits (86), Expect = 4e-42
Identities = 130/142 (91%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
|||||||||||||||||||||||||||||||||||||||| |||||| |||||||||||
Sbjct: 146 ttactccctccgtttcacaatgtaagtcattctagcatttctcatatttatattgatgtt 87
Query: 62 aatgaatctagactagatttat-taacatcaatataaatgtgagaaatgctagaatgact 120
||| |||||||| ||||| ||| || ||||||||| |||||| ||||||||| |||||||
Sbjct: 86 aataaatctaga-tagatctatctatcatcaatatgaatgtgggaaatgctaaaatgact 28
Query: 121 tacattatgaaacggaggaagt 142
|||||| |||||||||||||||
Sbjct: 27 tacattgtgaaacggaggaagt 6
Score = 161 bits (81), Expect = 3e-39
Identities = 125/137 (91%), Gaps = 2/137 (1%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||||||||||||| |||||||| ||| ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgata 64
Query: 63 -atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
|| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 65 gatagatctat-ctagatttattaacatcaatataaatatgagaaatgctagaatgactt 123
Query: 122 acattatgaaacggagg 138
||||| |||||||||||
Sbjct: 124 acattgtgaaacggagg 140
>RF00906;MIR1122;AP002539.2/12548-12403 39947:Oryza sativa Japonica
Group
Length = 146
Score = 170 bits (86), Expect = 4e-42
Identities = 124/136 (91%), Gaps = 3/136 (2%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| |||||||||||||||||| |
Sbjct: 142 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgatgtca 83
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||| || | ||||||| ||||| |||||||| ||||||||||||||||||||||||||
Sbjct: 82 atggatat---ctagattcattaatatcaatatgaatgtgagaaatgctagaatgactta 26
Query: 123 cattatgaaacggagg 138
|||| |||||||||||
Sbjct: 25 cattgtgaaacggagg 10
Score = 155 bits (78), Expect = 2e-37
Identities = 125/140 (89%), Gaps = 3/140 (2%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| || |||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatatta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||||| | || ||| |||||||||| ||| || |||||||||||||||||||
Sbjct: 65 atgaatctag---atatccattgacatcaatatgaatatgggaaatgctagaatgactta 121
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 122 cattgtgaaacggaggaagt 141
>RF00906;MIR1122;AP008214.1/11401129-11401273 39947:Oryza sativa
Japonica Group
Length = 145
Score = 167 bits (84), Expect = 6e-41
Identities = 124/137 (90%), Gaps = 4/137 (2%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 62 aatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
|||||||| | |||| |||||||||||||| |||||||||||||||||||||| ||
Sbjct: 64 aatgaatc----attgattcattaacatcaatatgaatgtgagaaatgctagaatgaatt 119
Query: 122 acattatgaaacggagg 138
||||| |||||||||||
Sbjct: 120 acattgtgaaacggagg 136
Score = 165 bits (83), Expect = 2e-40
Identities = 126/140 (90%), Gaps = 4/140 (2%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||
Sbjct: 141 tactccctccgtttcacaatgtaattcattctagcatttctcacattcatattgatgtta 82
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||| | |||| |||||||||||||| |||||| |||||||||||||||||||
Sbjct: 81 atgaatcaa----tgattcattaacatcaatatgaatgtgggaaatgctagaatgactta 26
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagt 6
>RF00906;MIR1122;AC037425.7/61774-61921 4530:Oryza sativa (rice)
Length = 148
Score = 167 bits (84), Expect = 6e-41
Identities = 127/140 (90%), Gaps = 1/140 (0%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||| |||||| ||||||||||||||||| |||| ||| ||||||| ||||||||
Sbjct: 144 tactccctctgtttcataatgtaagtcattctagtatttcccacattcatagtgatgtta 85
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| |||||||| || || ||||||||||| ||| ||||||| ||||||||||||||||||
Sbjct: 84 ataaatctaga-tatatatattaacatcactatgaatgtgaaaaatgctagaatgactta 26
Query: 123 cattatgaaacggaggaagt 142
||||||||||||||||||||
Sbjct: 25 cattatgaaacggaggaagt 6
Score = 145 bits (73), Expect = 2e-34
Identities = 122/137 (89%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| ||||||||||| ||||||||||||||||||||||| || ||||||| |||||||
Sbjct: 4 ttacttcctccgtttcataatgtaagtcattctagcatttttcacattcatagtgatgtt 63
Query: 62 aatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||| || || |||||||||||||||||| ||| |||||| ||||| ||||||||||||
Sbjct: 64 aatatatatat-ctagatttattaacatcactatgaatgtgggaaatactagaatgactt 122
Query: 122 acattatgaaacggagg 138
|||||||||||| ||||
Sbjct: 123 acattatgaaacagagg 139
>RF00906;MIR1122;AC146948.2/15882-15739 39947:Oryza sativa Japonica
Group
Length = 144
Score = 167 bits (84), Expect = 6e-41
Identities = 126/140 (90%), Gaps = 5/140 (3%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||||||
Sbjct: 140 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatgtta 81
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||||| || ||||||||| ||||| |||||| |||||||||||||||||||
Sbjct: 80 atgaatctatac-----atattaacattaatatgaatgtgggaaatgctagaatgactta 26
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagt 6
Score = 141 bits (71), Expect = 3e-33
Identities = 121/136 (88%), Gaps = 5/136 (3%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| ||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattaatgtta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| || || |||||| |||||||||||||| |||||| |||||||||||||||||||
Sbjct: 65 at--atgta---tagattcattaacatcaatatgaatgtgggaaatgctagaatgactta 119
Query: 123 cattatgaaacggagg 138
||| |||||||||||
Sbjct: 120 tattgtgaaacggagg 135
>RF00906;MIR1122;AP008212.1/28388180-28388020 39947:Oryza sativa
Japonica Group
Length = 161
Score = 165 bits (83), Expect = 2e-40
Identities = 133/152 (87%), Gaps = 12/152 (7%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 98
Query: 63 atgaatctaga------------ctagatttattaacatcaatataaatgtgagaaatgc 110
||||||||| | ||||||| |||||||||||||| |||||| |||||||
Sbjct: 97 atgaatctaaacatatgtatgtgctagattcattaacatcaatatgaatgtgggaaatgc 38
Query: 111 tagaatgacttacattatgaaacggaggaagt 142
|||||||||||||||| |||||||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggaggaagt 6
Score = 149 bits (75), Expect = 1e-35
Identities = 130/149 (87%), Gaps = 12/149 (8%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 62 aatgaatctag-ac-----------tagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| || |||||| |||||||||||||| |||||| ||||||
Sbjct: 64 aatgaatctagcacatacatatgtttagattcattaacatcaatatgaatgtgggaaatg 123
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||||||||||
Sbjct: 124 ctagaatgacttacattgtgaaacggagg 152
>RF00906;MIR1122;AP008216.1/349835-349994 39947:Oryza sativa
Japonica Group
Length = 160
Score = 163 bits (82), Expect = 9e-40
Identities = 131/149 (87%), Gaps = 15/149 (10%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 64
Query: 63 atgaatctagac-------------tagatttattaacatcaatataaatgtgagaaatg 109
|||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 122
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||||||||||
Sbjct: 123 ctagaatgacttacattgtgaaacggagg 151
Score = 107 bits (54), Expect = 4e-23
Identities = 124/149 (83%), Gaps = 15/149 (10%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 99
Query: 63 atgaatcta-------------gactagatttattaacatcaatataaatgtgagaaatg 109
|| |||||| | ||||||| |||||||||||||| ||| || ||||||
Sbjct: 98 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 39
Query: 110 ctagaatgacttacattatgaaacggagg 138
|| |||||||||||||| |||||||||||
Sbjct: 38 cttgaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02014011.1/23143-23002 39946:Oryza sativa
Indica Group
Length = 142
Score = 163 bits (82), Expect = 9e-40
Identities = 122/136 (89%), Gaps = 7/136 (5%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||| |||| |||| ||||||||| |||||| |||||||||||||||||||
Sbjct: 65 atgaatc-------gattcattagcatcaatatgaatgtgggaaatgctagaatgactta 117
Query: 123 cattatgaaacggagg 138
||||||||||||||||
Sbjct: 118 cattatgaaacggagg 133
Score = 151 bits (76), Expect = 3e-36
Identities = 122/138 (88%), Gaps = 7/138 (5%)
Strand = Plus / Minus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||
Sbjct: 140 gttactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgc 81
Query: 61 taatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgact 120
||||||||| |||| |||| ||||||||| |||||| |||||||||||||||||
Sbjct: 80 taatgaatc-------gattcattagcatcaatatgaatgtgggaaatgctagaatgact 28
Query: 121 tacattatgaaacggagg 138
|||||| |||||||||||
Sbjct: 27 tacattgtgaaacggagg 10
>RF00906;MIR1122;AC145127.1/349994-349835 39947:Oryza sativa
Japonica Group
Length = 160
Score = 163 bits (82), Expect = 9e-40
Identities = 131/149 (87%), Gaps = 15/149 (10%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattcaagcatttcccatattcatattgatgtta 97
Query: 63 atgaatctagac-------------tagatttattaacatcaatataaatgtgagaaatg 109
|||||||||||| ||||||||||||||||||||||||||| ||||||
Sbjct: 96 atgaatctagacatatatatctatatagatttattaacatcaatataaatgt--gaaatg 39
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagg 10
Score = 107 bits (54), Expect = 4e-23
Identities = 124/149 (83%), Gaps = 15/149 (10%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| || ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt--cacatttatattgatgtta 62
Query: 63 atgaatcta-------------gactagatttattaacatcaatataaatgtgagaaatg 109
|| |||||| | ||||||| |||||||||||||| ||| || ||||||
Sbjct: 63 ataaatctatatagatatatatgtctagattcattaacatcaatatgaatatgggaaatg 122
Query: 110 ctagaatgacttacattatgaaacggagg 138
|| |||||||||||||| |||||||||||
Sbjct: 123 cttgaatgacttacattgtgaaacggagg 151
>RF00906;MIR1122;AP005688.3/36085-35944 39947:Oryza sativa Japonica
Group
Length = 142
Score = 163 bits (82), Expect = 9e-40
Identities = 125/140 (89%), Gaps = 7/140 (5%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttctatattcatattgatgtta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||||||| ||||||||||||||| ||||| ||||| ||||||||||||
Sbjct: 65 atgaatctaga-------tattaacatcaatatgaatgtaggaaatagtagaatgactta 117
Query: 123 cattatgaaacggaggaagt 142
||| |||||||||||||||
Sbjct: 118 tattgtgaaacggaggaagt 137
Score = 97.6 bits (49), Expect = 4e-20
Identities = 115/136 (84%), Gaps = 7/136 (5%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||| |||||||||||| |||| | | ||||||||||||||||
Sbjct: 138 tacttcctccgtttcacaatataagtcattctactatttcctacattcatattgatgtta 79
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| ||||||| || |||||||||||||| ||| | ||||||||||||||||||
Sbjct: 78 at--atctaga-----ttcattaacatcaatatgaatatagaaaatgctagaatgactta 26
Query: 123 cattatgaaacggagg 138
|||| |||||||||||
Sbjct: 25 cattgtgaaacggagg 10
>RF00906;MIR1122;AP003999.3/94479-94320 39947:Oryza sativa Japonica
Group
Length = 160
Score = 161 bits (81), Expect = 3e-39
Identities = 132/151 (87%), Gaps = 11/151 (7%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 63 atgaatctaga-----------ctagatttattaacatcaatataaatgtgagaaatgct 111
||||||||||| | ||||| ||||||||||||||||| ||| ||||||||
Sbjct: 65 atgaatctagataggcatatgtccagattcattaacatcaatataaacgtgggaaatgct 124
Query: 112 agaatgacttacattatgaaacggaggaagt 142
||||||||||| ||| |||||||||||||||
Sbjct: 125 agaatgacttatattgtgaaacggaggaagt 155
Score = 129 bits (65), Expect = 1e-29
Identities = 125/147 (85%), Gaps = 11/147 (7%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||| |||||||||||||||||| ||| || ||||||||||||
Sbjct: 156 tacttcctccgtttcacaatataagtcattctagcatttcccacgtttatattgatgtta 97
Query: 63 atgaatctagac-----------tagatttattaacatcaatataaatgtgagaaatgct 111
|||||||| ||| |||||| |||||||||||||| |||||| ||||||||
Sbjct: 96 atgaatctggacatatgcctatctagattcattaacatcaatatgaatgtgggaaatgct 37
Query: 112 agaatgacttacattatgaaacggagg 138
||||||||||||||| |||||||||||
Sbjct: 36 agaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01007439.1/3817-3972 39947:Oryza sativa
Japonica Group
Length = 156
Score = 161 bits (81), Expect = 3e-39
Identities = 127/143 (88%), Gaps = 7/143 (4%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||| ||||| ||| |||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatgtca 64
Query: 63 atgaatctaga-------ctagatttattaacatcaatataaatgtgagaaatgctagaa 115
||||||||||| ||||||| ||| |||||||||| |||||| ||||||||||||
Sbjct: 65 atgaatctagacatctgtctagattcattgacatcaatatgaatgtgggaaatgctagaa 124
Query: 116 tgacttacattatgaaacggagg 138
|||||||||||||||||||||||
Sbjct: 125 tgacttacattatgaaacggagg 147
Score = 161 bits (81), Expect = 3e-39
Identities = 130/147 (88%), Gaps = 7/147 (4%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||| |
Sbjct: 152 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtca 93
Query: 63 atgaatctaga-------ctagatttattaacatcaatataaatgtgagaaatgctagaa 115
||||||||||| ||||||| ||| |||||||||| |||||| |||||| |||||
Sbjct: 92 atgaatctagacagatgtctagattcattgacatcaatatgaatgtgggaaatgatagaa 33
Query: 116 tgacttacattatgaaacggaggaagt 142
||||||||||| |||||||||||||||
Sbjct: 32 tgacttacattgtgaaacggaggaagt 6
>RF00906;MIR1122;AC145396.3/45626-45471 39947:Oryza sativa Japonica
Group
Length = 156
Score = 161 bits (81), Expect = 3e-39
Identities = 130/147 (88%), Gaps = 7/147 (4%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| |||||||||||||||||| | | ||||||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattctagcatttcctacattcatattgatgcta 93
Query: 63 atgaatctaga-------ctagatttattaacatcaatataaatgtgagaaatgctagaa 115
||||||||||| ||||||| |||| ||||||||| |||||| ||||||||||||
Sbjct: 92 atgaatctagacatatatctagattcattagcatcaatatgaatgtgggaaatgctagaa 33
Query: 116 tgacttacattatgaaacggaggaagt 142
||||||||||| |||||||||||||||
Sbjct: 32 tgacttacattgtgaaacggaggaagt 6
Score = 145 bits (73), Expect = 2e-34
Identities = 125/143 (87%), Gaps = 7/143 (4%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgcta 64
Query: 63 atgaatctaga-------ctagatttattaacatcaatataaatgtgagaaatgctagaa 115
||||||||||| ||||||| |||| ||||||||| ||||| ||||||||||||
Sbjct: 65 atgaatctagatatatgtctagattcattagcatcaatatgaatgtaggaaatgctagaa 124
Query: 116 tgacttacattatgaaacggagg 138
||||||| ||| |||||||||||
Sbjct: 125 tgacttatattgtgaaacggagg 147
>RF00906;MIR1122;AAAA02015271.1/30648-30797 39946:Oryza sativa
Indica Group
Length = 150
Score = 157 bits (79), Expect = 5e-38
Identities = 125/139 (89%), Gaps = 1/139 (0%)
Strand = Plus / Minus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||||||||||||||||||||||||| ||||| |||||||||| | ||| |||||||||
Sbjct: 148 gttactccctccgtttcacaatgtaaatcattttagcattttctacatttatattgatgc 89
Query: 61 taatgaatctaga-ctagatttattaacatcaatataaatgtgagaaatgctagaatgac 119
|||||||| |||| ||||||| |||| ||||||||| ||||||| |||||||||||| ||
Sbjct: 88 taatgaatttagatctagattcattagcatcaatatgaatgtgaaaaatgctagaataac 29
Query: 120 ttacattatgaaacggagg 138
||||||| |||||||||||
Sbjct: 28 ttacattgtgaaacggagg 10
Score = 153 bits (77), Expect = 8e-37
Identities = 123/137 (89%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||||| ||||||||||||| || ||||||||||||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcatttttcacattcatattgatgcta 64
Query: 63 atgaatctaga-ctagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||||||||||| ||| ||| |||| ||||||||||||||| |||||||| ||||| ||
Sbjct: 65 atgaatctagatctaaattcattagcatcaatataaatgtagaaaatgctaaaatgattt 124
Query: 122 acattatgaaacggagg 138
||||| |||||||||||
Sbjct: 125 acattgtgaaacggagg 141
>RF00906;MIR1122;AP008216.1/19603826-19603676 39947:Oryza sativa
Japonica Group
Length = 151
Score = 157 bits (79), Expect = 5e-38
Identities = 124/138 (89%), Gaps = 2/138 (1%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||||||||| ||| |||| || ||||||||||||||||
Sbjct: 147 tactccctccgtttcacaatgtaagtcattttagtatttctcacattcatattgatgtta 88
Query: 63 atgaatctagactagatt--tattaacatcaatataaatgtgagaaatgctagaatgact 120
|||||||||||| | ||| ||||||||||||||||||||||| |||| ||| |||||||
Sbjct: 87 atgaatctagacaacattaatattaacatcaatataaatgtgacaaatactaaaatgact 28
Query: 121 tacattatgaaacggagg 138
|||||| |||||| ||||
Sbjct: 27 tacattgtgaaacagagg 10
Score = 125 bits (63), Expect = 2e-28
Identities = 120/138 (86%), Gaps = 2/138 (1%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||| |||||||||||||||||||| ||| |||| || ||| ||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattttagtatttgtcacatttatattgatgtta 64
Query: 63 atg--aatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgact 120
|| ||| | | ||||||| |||||||||||||| |||||||||||| ||| |||||||
Sbjct: 65 atattaatgttgtctagattcattaacatcaatatgaatgtgagaaatactaaaatgact 124
Query: 121 tacattatgaaacggagg 138
|||||| |||||||||||
Sbjct: 125 tacattgtgaaacggagg 142
>RF00906;MIR1122;AP003368.2/55944-55807 39947:Oryza sativa Japonica
Group
Length = 138
Score = 155 bits (78), Expect = 2e-37
Identities = 123/140 (87%), Gaps = 11/140 (7%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||||||| ||||||| | |||||||| |||||| |||||||||||
Sbjct: 65 atgaatctaga-----------aacatcactgtaaatgtgggaaatgttagaatgacttc 113
Query: 123 cattatgaaacggaggaagt 142
||||||||||||||||||||
Sbjct: 114 cattatgaaacggaggaagt 133
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| |||||||||||||| |||||| |||||||||||||||||||||| ||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtggaaaatgctagaatgacttacattgtgaaac 15
Query: 134 ggagg 138
|||||
Sbjct: 14 ggagg 10
>RF00906;MIR1122;AAAA02010488.1/13895-13757 39946:Oryza sativa
Indica Group
Length = 139
Score = 153 bits (77), Expect = 8e-37
Identities = 120/136 (88%), Gaps = 10/136 (7%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| |||||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtca 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||||||| ||||||||||| |||||| |||||||||||||||||||
Sbjct: 65 atgaatctagac----------aacatcaatatgaatgtgggaaatgctagaatgactta 114
Query: 123 cattatgaaacggagg 138
||||||||||||||||
Sbjct: 115 cattatgaaacggagg 130
Score = 137 bits (69), Expect = 5e-32
Identities = 121/140 (86%), Gaps = 10/140 (7%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 135 tactccctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtt- 77
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
| ||||||| ||| |||||||||| |||||| |||||||||||||||||||
Sbjct: 76 ---------gtctagattcattgacatcaatatgaatgtgggaaatgctagaatgactta 26
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagt 6
>RF00906;MIR1122;AP004694.3/155364-155519 39947:Oryza sativa
Japonica Group
Length = 156
Score = 153 bits (77), Expect = 8e-37
Identities = 129/147 (87%), Gaps = 7/147 (4%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| ||||||||| |||||||||||| ||| ||||||||| ||
Sbjct: 152 tactccctccgtttcacaatataagtcattttagcattttccacatttatattgatgcta 93
Query: 63 atgaatctaga-------ctagatttattaacatcaatataaatgtgagaaatgctagaa 115
||||||||||| ||| ||| |||| ||||||| |||||||||||||||||| ||
Sbjct: 92 atgaatctagagatatatctaaattcattagcatcaatgtaaatgtgagaaatgctaaaa 33
Query: 116 tgacttacattatgaaacggaggaagt 142
||||||||||| |||||||||||||||
Sbjct: 32 tgacttacattgtgaaacggaggaagt 6
Score = 105 bits (53), Expect = 2e-22
Identities = 120/143 (83%), Gaps = 7/143 (4%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||||||||||||| |||||||| || ||| | ||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcacatttacattgatgcta 64
Query: 63 atgaatctaga-------ctagatttattaacatcaatataaatgtgagaaatgctagaa 115
|||||| |||| ||||||| |||| |||||||||||||||| |||||||| ||
Sbjct: 65 atgaatttagatatatctctagattcattagcatcaatataaatgtggaaaatgctaaaa 124
Query: 116 tgacttacattatgaaacggagg 138
||||||| ||| |||||||||||
Sbjct: 125 tgacttatattgtgaaacggagg 147
>RF00906;MIR1122;AP004562.3/125584-125444 39947:Oryza sativa
Japonica Group
Length = 141
Score = 151 bits (76), Expect = 3e-36
Identities = 121/137 (88%), Gaps = 8/137 (5%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||| |
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatggt 63
Query: 62 aatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||||||||| ||||||||||||||||| |||||| ||||||||||||||||||
Sbjct: 64 aatgaatct--------tttattaacatcaatatgaatgtgggaaatgctagaatgactt 115
Query: 122 acattatgaaacggagg 138
|| || |||||||||||
Sbjct: 116 actttgtgaaacggagg 132
Score = 149 bits (75), Expect = 1e-35
Identities = 123/140 (87%), Gaps = 8/140 (5%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||| ||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 137 tactccctccgtttcacaaagtaagtcattctagcatttcccacattcatattgatgtta 78
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| || ||||| |||| ||||||||| |||||| |||||||||||||||||||
Sbjct: 77 ataaa--------agattcattaccatcaatatgaatgtgggaaatgctagaatgactta 26
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagt 6
>RF00906;MIR1122;AP002524.2/113149-113010 39947:Oryza sativa
Japonica Group
Length = 140
Score = 151 bits (76), Expect = 3e-36
Identities = 125/141 (88%), Gaps = 9/141 (6%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
|||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||||||
Sbjct: 137 ttactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtt 78
Query: 62 aatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
|||||||||||| ||||| |||||||| ||| || ||||||||||||||||||
Sbjct: 77 aatgaatctaga-tagat--------atcaatatgaatatgggaaatgctagaatgactt 27
Query: 122 acattatgaaacggaggaagt 142
||||| |||||||||||||||
Sbjct: 26 acattgtgaaacggaggaagt 6
Score = 133 bits (67), Expect = 8e-31
Identities = 119/136 (87%), Gaps = 9/136 (6%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat---- 60
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||| ||||||| |||||||||||||| |||||| |||||| ||||||||||||
Sbjct: 61 ----atcta-tctagattcattaacatcaatatgaatgtgggaaatgttagaatgactta 115
Query: 123 cattatgaaacggagg 138
|||| |||||||||||
Sbjct: 116 cattgtgaaacggagg 131
>RF00906;MIR1122;AAAA02027662.1/3302-3160 39946:Oryza sativa Indica
Group
Length = 143
Score = 151 bits (76), Expect = 3e-36
Identities = 122/136 (89%), Gaps = 6/136 (4%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| ||| |||||||||||| ||||||||| ||||||||||||||||
Sbjct: 139 tacttcctccgtttcataatataagtcattctaacattttccacattcatattgatgtta 80
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||||||| || ||||||||| |||||||||| ||||||||||||||||||
Sbjct: 79 atgaatctagac---at---ataacatcaacataaatgtgaaaaatgctagaatgactta 26
Query: 123 cattatgaaacggagg 138
||||||||||||||||
Sbjct: 25 cattatgaaacggagg 10
Score = 119 bits (60), Expect = 1e-26
Identities = 121/140 (86%), Gaps = 6/140 (4%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||||||||||||||||||||||| || ||| || |||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttttcacatttatgttgatgtta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| | ||||||| |||||||||||||| |||||| ||||| ||||||||||||
Sbjct: 65 t---atgt---ctagattcattaacatcaatatgaatgtggaaaatgttagaatgactta 118
Query: 123 cattatgaaacggaggaagt 142
|||||||||||||||||||
Sbjct: 119 tattatgaaacggaggaagt 138
>RF00906;MIR1122;AC135419.2/12863-12720 39947:Oryza sativa Japonica
Group
Length = 144
Score = 149 bits (75), Expect = 1e-35
Identities = 125/140 (89%), Gaps = 5/140 (3%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 5 tactacctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||||||| || ||| |||||||||| |||| ||||||||||||||||||
Sbjct: 65 atgaatctagac---atatat--acatcaatatgtatgtacaaaatgctagaatgactta 119
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 120 cattgtgaaacggaggaagt 139
Score = 125 bits (63), Expect = 2e-28
Identities = 119/136 (87%), Gaps = 5/136 (3%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||||||||||||||||||||||| | || |||||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagtcattctagcattttgtacatacatattgatgtat 81
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| || | ||||||| |||||||||||||| |||||| |||||||||||||||||||
Sbjct: 80 at--atgt---ctagattcattaacatcaatatgaatgtgggaaatgctagaatgactta 26
Query: 123 cattatgaaacggagg 138
|||| |||||||||||
Sbjct: 25 cattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02042348.1/276-116 39946:Oryza sativa Indica
Group
Length = 161
Score = 149 bits (75), Expect = 1e-35
Identities = 131/152 (86%), Gaps = 12/152 (7%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||| ||||| ||||||| ||||| ||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaacatttcccatatttatattaatgtta 98
Query: 63 atgaatctaga------------ctagatttattaacatcaatataaatgtgagaaatgc 110
||||||||||| ||||||| |||| ||||||||| ||||||||||||||
Sbjct: 97 atgaatctagatatatattctatctagattcattaccatcaatatgaatgtgagaaatgc 38
Query: 111 tagaatgacttacattatgaaacggaggaagt 142
|||||||||||||||| ||||||||||||||
Sbjct: 37 tagaatgacttacattgcgaaacggaggaagt 6
Score = 117 bits (59), Expect = 5e-26
Identities = 124/148 (83%), Gaps = 12/148 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||| ||||||||||||||||||||||| || ||||||||||||| ||
Sbjct: 5 tacttcctccgtttcgcaatgtaagtcattctagcatttctcacattcatattgatggta 64
Query: 63 atgaatctaga------------ctagatttattaacatcaatataaatgtgagaaatgc 110
||||||||||| ||||||| |||||||| ||||||||| || ||||||
Sbjct: 65 atgaatctagatagaatatatatctagattcattaacattaatataaatatgggaaatgt 124
Query: 111 tagaatgacttacattatgaaacggagg 138
|||||||||||||||| |||||||||||
Sbjct: 125 tagaatgacttacattgtgaaacggagg 152
>RF00906;MIR1122;AY749345.1/542-381 40148:Oryza glumipatula
Length = 162
Score = 147 bits (74), Expect = 5e-35
Identities = 132/154 (85%), Gaps = 13/154 (8%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
|||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||
Sbjct: 4 ttactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtt 63
Query: 62 aatgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaat 108
|||||||||||| ||| ||| |||||||||||||| |||||| |||||
Sbjct: 64 aatgaatctagatagatatatatgtctacattcattaacatcaatatgaatgtgggaaat 123
Query: 109 gctagaatgacttacattatgaaacggaggaagt 142
|||||||||||||||| |||||||||||||||
Sbjct: 124 attagaatgacttacattgtgaaacggaggaagt 157
Score = 129 bits (65), Expect = 1e-29
Identities = 126/149 (84%), Gaps = 13/149 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||| |||| ||| ||||||||||||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctaatatttcccacattcatattgatgtta 99
Query: 63 atgaatctagac-------------tagatttattaacatcaatataaatgtgagaaatg 109
|||||| ||||| |||||| |||||||||||||| |||||| ||||||
Sbjct: 98 atgaatgtagacatatatatctatctagattcattaacatcaatatgaatgtgggaaatg 39
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AP003770.3/99658-99497 39947:Oryza sativa Japonica
Group
Length = 162
Score = 145 bits (73), Expect = 2e-34
Identities = 131/153 (85%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||| |||||||||||||||||||||||||| ||| |||||||||||| |||
Sbjct: 158 tactccctccgtatcacaatgtaagtcattctagcatttcccacattcatattgatatta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||||||||||||||||||| ||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatataaatgtgggaaatg 39
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
| | ||||||||||||| |||||||||||||||
Sbjct: 38 caaaaatgacttacattgtgaaacggaggaagt 6
Score = 113 bits (57), Expect = 7e-25
Identities = 124/149 (83%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||||||||||||| | |||||| ||| ||| ||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatttttgcatttcccacatttatattgatgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||| |||||||| |||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||| ||| |||||||
Sbjct: 125 ctagaatgacttacattgtgatacggagg 153
>RF00906;MIR1122;AL662961.3/56991-57130 39947:Oryza sativa Japonica
Group
Length = 140
Score = 143 bits (72), Expect = 8e-34
Identities = 122/140 (87%), Gaps = 9/140 (6%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||||||||||||||||| |||| ||||||||||||||||| ||
Sbjct: 136 tactccctccgtttcataatgtaagtcattctagtatttcccatattcatattgatgcta 77
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||||||||||| ||||||||| ||| |||||||| ||||||| |||||
Sbjct: 76 atgaatctagactag---------catcaatatgaatatgagaaatactagaattactta 26
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagt 6
Score = 111 bits (56), Expect = 3e-24
Identities = 115/136 (84%), Gaps = 9/136 (6%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||||||||| ||||||| |||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtaattctagtatttctcatattcatattgatg--- 61
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||| ||||||| |||| ||||||||| ||| || ||||| |||||||||||||
Sbjct: 62 ------ctagtctagattcattagcatcaatatgaatatgggaaatactagaatgactta 115
Query: 123 cattatgaaacggagg 138
||||||||||||||||
Sbjct: 116 cattatgaaacggagg 131
>RF00906;MIR1122;AAAA02032505.1/38201-38060 39946:Oryza sativa
Indica Group
Length = 142
Score = 141 bits (71), Expect = 3e-33
Identities = 117/133 (87%), Gaps = 7/133 (5%)
Strand = Plus / Minus
Query: 6 tccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatg 65
|||||||||||||||||||||||||||||||||||| || ||||||||| |||| ||||
Sbjct: 135 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatatttatgtcaatg 76
Query: 66 aatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgacttacat 125
||||||||| || |||||||||| |||||||||||||||||||||||||||||
Sbjct: 75 aatctagac-------atatacatcaatatgaatgtgagaaatgctagaatgacttacat 23
Query: 126 tatgaaacggagg 138
| |||||||||||
Sbjct: 22 tgtgaaacggagg 10
Score = 127 bits (64), Expect = 5e-29
Identities = 119/138 (86%), Gaps = 7/138 (5%)
Strand = Plus / Plus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||| |||||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 3 gttattccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Query: 61 taatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgact 120
||| ||||||| ||| |||| ||||| ||||||||||||||||||||||||
Sbjct: 63 atatgt-------ctagattcattgacataaatatgaatgtgagaaatgctagaatgact 115
Query: 121 tacattatgaaacggagg 138
|||||| |||||||||||
Sbjct: 116 tacattgtgaaacggagg 133
>RF00906;MIR1122;AAAA02033830.1/7365-7526 39946:Oryza sativa Indica
Group
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 126/147 (85%), Gaps = 13/147 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||||| | |||||| ||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttctaaattcatgttgatatta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||||||||||||| |||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatgaatgtgagaaatg 39
Query: 110 ctagaatgacttacattatgaaacgga 136
|||||||||||||||| |||||||||
Sbjct: 38 gtagaatgacttacattgtgaaacgga 12
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||| |||||||||||||||||||||||||| ||||| || ||||||||||||||||
Sbjct: 5 tactccttccgtttcacaatgtaagtcattctaccatttctcacattcatattgatgtta 64
Query: 63 atgaatctaga 73
|||||||||||
Sbjct: 65 atgaatctaga 75
>RF00906;MIR1122;AAAA02033049.1/305-466 39946:Oryza sativa Indica
Group
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 74/75 (98%)
Strand = Plus / Minus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 160 gttactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgt 101
Query: 61 taatgaatctagact 75
|||||||||||||||
Sbjct: 100 taatgaatctagact 86
Score = 113 bits (57), Expect = 7e-25
Identities = 124/149 (83%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||| |||||||||||||| |||| |||||||| |||| ||
Sbjct: 5 tacttcctccgtttcacaatgtatgtcattctagcattgtccacattcatatagatgcta 64
Query: 63 atgaatct-------------agactagatttattaacatcaatataaatgtgagaaatg 109
|||||||| || ||||||| |||||||||||||| |||||| |||||
Sbjct: 65 atgaatctaggcatatatataagtctagattcattaacatcaatatgaatgtggaaaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AAAA02019037.1/4499-4338 39946:Oryza sativa Indica
Group
Length = 162
Score = 141 bits (71), Expect = 3e-33
Identities = 129/151 (85%), Gaps = 13/151 (8%)
Strand = Plus / Minus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |
Sbjct: 160 gttactccctccgtttcacaatgtaagtcattctaacattttccacattcatattgatat 101
Query: 61 taatgaatcta-------------gactagatttattaacatcaatataaatgtgagaaa 107
||||||||||| | ||||||| |||||||||| ||| |||||| ||||
Sbjct: 100 taatgaatctaaatagatatatatgtctagattcattaacatcactatgaatgtgggaaa 41
Query: 108 tgctagaatgacttacattatgaaacggagg 138
||||||||||||||||||| |||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggagg 10
Score = 129 bits (65), Expect = 1e-29
Identities = 126/149 (84%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 64
Query: 63 atgaatctagac-------------tagatttattaacatcaatataaatgtgagaaatg 109
|||||||||||| |||||| ||||| |||||||| |||||| |||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtggaaaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
|||||||||||||||| |||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AP006756.2/89933-90079 39947:Oryza sativa Japonica
Group
Length = 147
Score = 139 bits (70), Expect = 1e-32
Identities = 126/141 (89%), Gaps = 4/141 (2%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcat-tctagcattttccatattcatattgatgtt 61
||||||||||||||||||||||||||||| | |||||||| ||| ||||||||||||| |
Sbjct: 143 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 84
Query: 62 aatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
|||| || || ||||||| |||| ||||||||| |||||| ||||||||| ||||||||
Sbjct: 83 aatgtat--ag-ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgactt 27
Query: 122 acattatgaaacggaggaagt 142
||||| |||||||||||||||
Sbjct: 26 acattgtgaaacggaggaagt 6
Score = 125 bits (63), Expect = 2e-28
Identities = 122/138 (88%), Gaps = 4/138 (2%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| ||||||||||||||||||||||||| |||||||| ||| ||||||||||||| |
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgct 63
Query: 62 aatgaatctagactagatttattaacatcaatataaatgtgagaaatgctaga-atgact 120
||||||||||| || || |||| ||||||||| |||||| ||||||||| | ||||||
Sbjct: 64 aatgaatctag-ct--atacattagcatcaatatgaatgtgggaaatgctaaacatgact 120
Query: 121 tacattatgaaacggagg 138
|||||| |||||||||||
Sbjct: 121 tacattgtgaaacggagg 138
>RF00906;MIR1122;AC108755.2/71660-71514 39947:Oryza sativa Japonica
Group
Length = 147
Score = 139 bits (70), Expect = 1e-32
Identities = 126/141 (89%), Gaps = 4/141 (2%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcat-tctagcattttccatattcatattgatgtt 61
||||||||||||||||||||||||||||| | |||||||| ||| ||||||||||||| |
Sbjct: 5 tactccctccgtttcacaatgtaagtcatgtttagcatttcccacattcatattgatgct 64
Query: 62 aatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
|||| || || ||||||| |||| ||||||||| |||||| ||||||||| ||||||||
Sbjct: 65 aatgtat--ag-ctagattcattagcatcaatatgaatgtgggaaatgctaaaatgactt 121
Query: 122 acattatgaaacggaggaagt 142
||||| |||||||||||||||
Sbjct: 122 acattgtgaaacggaggaagt 142
Score = 125 bits (63), Expect = 2e-28
Identities = 122/138 (88%), Gaps = 4/138 (2%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| ||||||||||||||||||||||||| |||||||| ||| ||||||||||||| |
Sbjct: 144 ttacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgct 85
Query: 62 aatgaatctagactagatttattaacatcaatataaatgtgagaaatgctaga-atgact 120
||||||||||| || || |||| ||||||||| |||||| ||||||||| | ||||||
Sbjct: 84 aatgaatctag-ct--atacattagcatcaatatgaatgtgggaaatgctaaacatgact 28
Query: 121 tacattatgaaacggagg 138
|||||| |||||||||||
Sbjct: 27 tacattgtgaaacggagg 10
>RF00906;MIR1122;AP004761.3/70716-70562 39947:Oryza sativa Japonica
Group
Length = 155
Score = 139 bits (70), Expect = 1e-32
Identities = 128/146 (87%), Gaps = 6/146 (4%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| |||||||||||| |||| ||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctattatttcccacattcatattgatgtta 64
Query: 63 atgaatctaga-cta-----gatttattaacatcaatataaatgtgagaaatgctagaat 116
||||| ||| | ||| | || ||||||||||||||||||||| ||||| |||||||
Sbjct: 65 atgaaactacatctatttaagtttcattaacatcaatataaatgtgggaaatactagaat 124
Query: 117 gacttacattatgaaacggaggaagt 142
|||||||||| |||||||||||||||
Sbjct: 125 gacttacattgtgaaacggaggaagt 150
Score = 109 bits (55), Expect = 1e-23
Identities = 120/142 (84%), Gaps = 6/142 (4%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||||||||||||||||| |||| ||| ||| ||||||||||||
Sbjct: 151 tacttcctccgtttcacaatgtaagtcattctagtatttcccacatttatattgatgtta 92
Query: 63 atgaatctagactaga------tttattaacatcaatataaatgtgagaaatgctagaat 116
||||| || | |||| || |||||||||||||| |||||| ||||| ||||||
Sbjct: 91 atgaaacttaaatagatgtagtttcattaacatcaatatgaatgtgggaaataatagaat 32
Query: 117 gacttacattatgaaacggagg 138
|||||| ||| |||||||||||
Sbjct: 31 gacttatattgtgaaacggagg 10
>RF00906;MIR1122;AP005879.3/69009-69170 39947:Oryza sativa Japonica
Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 130/153 (84%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| |||||||||||||||||||| ||||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcattttctatattcatattgatgcta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||| | ||||||||||||| |||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagagtcattaacatcaatacgaatgtggaaaatg 39
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
||||||||||||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagt 6
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||||||| |||| |||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcgtattgatgtta 64
Query: 63 atgaatctaga 73
|||| ||||||
Sbjct: 65 atgactctaga 75
>RF00906;MIR1122;AAAA02014050.1/50727-50888 39946:Oryza sativa
Indica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 130/153 (84%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||||||||||||||||||||| | |||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||||||| |||| |||||||| | ||
Sbjct: 98 atgaatctagatatagacatatatctagattcattaacatccatatgaatgtgagcattg 39
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
|||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagt 6
Score = 89.7 bits (45), Expect = 1e-17
Identities = 121/149 (81%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| ||||||||||||||||||| | || |||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||||||| |||| ||| | | ||||
Sbjct: 65 atgaatctagatatatgtctatatctagattcattaacatctatatgaatataggcaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
|||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagg 153
>RF00906;MIR1122;AAAA02016992.1/488-649 39946:Oryza sativa Indica
Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 127/149 (85%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattacccatattcatatggatgtta 64
Query: 63 atgaatcta-------------gactagatttattaacatcaatataaatgtgagaaatg 109
||||||||| | ||||||| |||||||| ||||| |||||||||||||
Sbjct: 65 atgaatctagttggatatatatgtctagattcattaacattaatatgaatgtgagaaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagg 153
Score = 131 bits (66), Expect = 3e-30
Identities = 130/154 (84%), Gaps = 13/154 (8%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
|||||||||||||||||||||||||||||||||||||||| || ||||||||| |||||
Sbjct: 159 ttactccctccgtttcacaatgtaagtcattctagcatttctcacattcatattaatgtt 100
Query: 62 aatgaatctag-------------actagatttattaacatcaatataaatgtgagaaat 108
||||||||||| |||||||| ||||||||| |||| ||| || | |||
Sbjct: 99 aatgaatctagacatatatatccaactagattcattaacatccatatgaatatgggtaat 40
Query: 109 gctagaatgacttacattatgaaacggaggaagt 142
|||||||||||||||||| |||||||||||||||
Sbjct: 39 gctagaatgacttacattgtgaaacggaggaagt 6
>RF00906;MIR1122;AACV01021759.1/1958-2106 39947:Oryza sativa
Japonica Group
Length = 149
Score = 137 bits (69), Expect = 5e-32
Identities = 125/141 (88%), Gaps = 2/141 (1%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatgtta 64
Query: 63 atgaatctagactagatttat-taacatcaatataaatgtgagaaatgctagaatgactt 121
|||||||||||| | || ||| || | | ||| |||||| ||||||||||||||||||
Sbjct: 65 atgaatctagac-atatatatctatctagattatgaatgtgggaaatgctagaatgactt 123
Query: 122 acattatgaaacggaggaagt 142
||||| | |||||||||||||
Sbjct: 124 acattgtaaaacggaggaagt 144
Score = 113 bits (57), Expect = 7e-25
Identities = 119/137 (86%), Gaps = 2/137 (1%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||| |||||||||||||||||||||||| ||| ||||||| | | ||
Sbjct: 145 tacttcctccgttttacaatgtaagtcattctagcatttcccacattcataatctagata 86
Query: 63 -atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
|| || | | ||||||| |||||||||||||| ||| |||||||||||||||||||||
Sbjct: 85 gatatatat-gtctagattcattaacatcaatatgaatatgagaaatgctagaatgactt 27
Query: 122 acattatgaaacggagg 138
|||||||||||||||||
Sbjct: 26 acattatgaaacggagg 10
>RF00906;MIR1122;CR855156.1/56940-57078 4530:Oryza sativa (rice)
Length = 139
Score = 137 bits (69), Expect = 5e-32
Identities = 121/140 (86%), Gaps = 10/140 (7%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| |||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 135 tactccctccgtttcacaatataagtcattctaacatttcccacattcatattgatgtta 76
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||||||| |||||||||||| |||||| ||||||||||||||||||
Sbjct: 75 atgaatctaga----------taacatcaatatgaatgtggaaaatgctagaatgactta 26
Query: 123 cattatgaaacggaggaagt 142
||| |||||||||||||||
Sbjct: 25 tattgtgaaacggaggaagt 6
Score = 123 bits (62), Expect = 7e-28
Identities = 117/137 (85%), Gaps = 10/137 (7%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| ||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 4 ttacttcctccgtttcacaatataagtcattctagcattttccacattcatattgatgtt 63
Query: 62 aatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
| ||||||| |||||||||||||| |||||| |||||| |||||||||||
Sbjct: 64 a----------tctagattcattaacatcaatatgaatgtgggaaatgttagaatgactt 113
Query: 122 acattatgaaacggagg 138
| ||| |||||||||||
Sbjct: 114 atattgtgaaacggagg 130
>RF00906;MIR1122;AP006533.3/146933-147094 39947:Oryza sativa
Japonica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 130/153 (84%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatattccgcattcatattgatgtta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
|||||| |||| ||||||| |||||||||||||| ||| | ||||||
Sbjct: 98 atgaatatagacatctatatctatctagattcattaacatcaatatgaatataggaaatg 39
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
||||||||||||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagt 6
Score = 123 bits (62), Expect = 7e-28
Identities = 126/150 (84%), Gaps = 13/150 (8%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| |||||||||||||||||||||||||||||||||| | |||||||||||||||||
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattctagcatttcctatattcatattgatgtt 63
Query: 62 aatgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaat 108
|||||||||||| ||| ||| |||||||||||||| |||| | | ||
Sbjct: 64 aatgaatctagatagatatagatgtctatattcattaacatcaatatgaatgcggaatat 123
Query: 109 gctagaatgacttacattatgaaacggagg 138
|||||||||||||||||| |||||||||||
Sbjct: 124 gctagaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AP005467.3/75230-75071 39947:Oryza sativa Japonica
Group
Length = 160
Score = 137 bits (69), Expect = 5e-32
Identities = 126/147 (85%), Gaps = 11/147 (7%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||| ||||||||||||||||||||||||||| | ||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattttctacattcatattgatgtta 64
Query: 63 atgaatctaga-----------ctagatttattaacatcaatataaatgtgagaaatgct 111
|||||| |||| ||||||| |||||||||||||| |||||| ||||||||
Sbjct: 65 atgaatgtagacatatatatgtctagattcattaacatcaatatgaatgtgggaaatgct 124
Query: 112 agaatgacttacattatgaaacggagg 138
||||||||||||||| || ||||||||
Sbjct: 125 agaatgacttacattgtggaacggagg 151
Score = 137 bits (69), Expect = 5e-32
Identities = 129/151 (85%), Gaps = 11/151 (7%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||| ||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 156 tactccctccgttccacaatgtaagtcattctagcatttcccacattcatattgatgtta 97
Query: 63 atgaatctaga-----------ctagatttattaacatcaatataaatgtgagaaatgct 111
||||||||||| ||| ||| |||||||||||||| ||||| |||||||
Sbjct: 96 atgaatctagacatatatatgtctacattcattaacatcaatatgaatgtagaaaatgct 37
Query: 112 agaatgacttacattatgaaacggaggaagt 142
||||||||||||||| || ||||||||||||
Sbjct: 36 agaatgacttacattgtggaacggaggaagt 6
>RF00906;MIR1122;AAAA02010835.1/20211-20372 39946:Oryza sativa
Indica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 130/153 (84%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||| ||||| ||| ||||||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctaacatttaccacattcatattgatgcta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||| |||||||| |||||||||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattagtatcaatatgaatgtgagaaatg 39
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
||||||||||||| ||| |||||||||||||||
Sbjct: 38 ctagaatgacttatattgtgaaacggaggaagt 6
Score = 97.6 bits (49), Expect = 4e-20
Identities = 122/149 (81%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||| |||||||||||||||||| || |||||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatacta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||| ||||||||| |||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattagcatcaatatgaatgtggtaaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
|||||||||||||||| |||||||||||
Sbjct: 125 ttagaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AACV01003595.1/12314-12153 39947:Oryza sativa
Japonica Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 130/153 (84%), Gaps = 13/153 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||||||||||||||||||||| | |||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattgcctatattcatatagatgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||||||| |||| |||||||| | ||
Sbjct: 65 atgaatctagacatagacatatatctagattcattaacatccatatgaatgtgagcattg 124
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
|||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagt 157
Score = 89.7 bits (45), Expect = 1e-17
Identities = 121/149 (81%), Gaps = 13/149 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| ||||||||||||||||||| | || |||||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagtcattctagcaatgctcacattcatatggatgtta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||||||| |||| ||| | | ||||
Sbjct: 98 atgaatctagatatatgtctatgtctagattcattaacatctatatgaatataggcaatg 39
Query: 110 ctagaatgacttacattatgaaacggagg 138
|||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AP005295.3/50213-50374 39947:Oryza sativa Japonica
Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 130/153 (84%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||||||||||||||||| |||| ||||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattctccacattcatattaatgtta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||||| ||||| |||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacactaatatgaatgtgggaaatg 39
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
||| ||||||||||||| |||||||||||||||
Sbjct: 38 ctaaaatgacttacattgtgaaacggaggaagt 6
Score = 105 bits (53), Expect = 2e-22
Identities = 123/149 (82%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||||||||||||| |||||||| ||| ||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattagtgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||||||| ||||| |||||| ||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacattaatatgaatgtggagaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AP003303.4/1543-1382 39947:Oryza sativa Japonica
Group
Length = 162
Score = 137 bits (69), Expect = 5e-32
Identities = 127/149 (85%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||||||| || |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacatccatattgatgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||||| |||||| |||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaacaacaatatgaatgtgggaaata 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagg 153
Score = 137 bits (69), Expect = 5e-32
Identities = 130/153 (84%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||||||||||||| |||| ||| |||||||||| |||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagtatttcccacattcatattgttgtta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||||||||||||| ||||| |||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacatcaatatggatgtggaaaatg 39
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
||||||||||||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagt 6
>RF00906;MIR1122;AAAA02024426.1/6236-6378 39946:Oryza sativa Indica
Group
Length = 143
Score = 135 bits (68), Expect = 2e-31
Identities = 123/140 (87%), Gaps = 6/140 (4%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| ||||||||| |||||||||||| ||||||||||||| ||
Sbjct: 139 tactccctccgtttcacaatataagtcattttagcattttccacattcatattgatgcta 80
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| | ||||||| |||| ||||||||||||| |||||||||||| |||||||||
Sbjct: 79 t---atgt---ctagattcattagcatcaatataaatatgagaaatgctaaaatgactta 26
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagt 6
Score = 103 bits (52), Expect = 7e-22
Identities = 116/136 (85%), Gaps = 6/136 (4%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||||||||||||| |||||||| |||||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgcta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||||||| || || ||||||||| |||||| |||||||| |||||||||
Sbjct: 65 atgaatctagac---at---atagcatcaatatgaatgtggaaaatgctaaaatgactta 118
Query: 123 cattatgaaacggagg 138
||| |||||||||||
Sbjct: 119 tattgtgaaacggagg 134
>RF00906;MIR1122;AL928743.1/4136-4001 4530:Oryza sativa (rice)
Length = 136
Score = 135 bits (68), Expect = 2e-31
Identities = 120/140 (85%), Gaps = 13/140 (9%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtt- 63
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||| |||||||||||||| |||||| || ||||||||||||||||
Sbjct: 64 ------------tagattcattaacatcaatatgaatgtgggatatgctagaatgactta 111
Query: 123 cattatgaaacggaggaagt 142
||| |||||||||||||||
Sbjct: 112 tattgtgaaacggaggaagt 131
Score = 111 bits (56), Expect = 3e-24
Identities = 114/136 (83%), Gaps = 13/136 (9%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||| |||||||||||||||| | ||| ||||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatataagtcattctagcatatcccacattcatattgatgtta 73
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||||| ||||||||||| |||||| ||||||||||||||||||
Sbjct: 72 atgaatcta-------------aacatcaatatgaatgtggaaaatgctagaatgactta 26
Query: 123 cattatgaaacggagg 138
|||| |||||||||||
Sbjct: 25 cattgtgaaacggagg 10
>RF00906;MIR1122;AC137070.2/83200-83361 39947:Oryza sativa Japonica
Group
Length = 162
Score = 133 bits (67), Expect = 8e-31
Identities = 125/147 (85%), Gaps = 13/147 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| ||| |||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgttgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||| ||||||||| |||||| ||||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaccatcaatatgaatgtgggaaatg 124
Query: 110 ctagaatgacttacattatgaaacgga 136
| ||||||||||||||||||||||||
Sbjct: 125 gtggaatgacttacattatgaaacgga 151
Score = 113 bits (57), Expect = 7e-25
Identities = 124/149 (83%), Gaps = 13/149 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||| ||||||||| |||||||||||||| | ||||| ||| ||||||||||||| ||
Sbjct: 158 tactccttccgtttcataatgtaagtcattccaccatttcccacattcatattgatggta 99
Query: 63 atgaatctagac-------------tagatttattaacatcaatataaatgtgagaaatg 109
|||||||||||| |||||| ||||||| |||||| |||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacaacaatatgaatgtgggaaatg 39
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;FJ266024.1/267591-267730 39946:Oryza sativa Indica
Group
Length = 140
Score = 131 bits (66), Expect = 3e-30
Identities = 122/142 (85%), Gaps = 9/142 (6%)
Strand = Plus / Plus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||| |
Sbjct: 3 gttactccctccgtttcacaatgtaagtcattctagcattttccacatttatattgatat 62
Query: 61 taatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgact 120
|||| ||| ||| || || |||||||| |||||| |||||||||||||||||
Sbjct: 63 taataaatttag---------ataaatatcaatatgaatgtgggaaatgctagaatgact 113
Query: 121 tacattatgaaacggaggaagt 142
|| ||| |||||||||||||||
Sbjct: 114 tatattgtgaaacggaggaagt 135
Score = 119 bits (60), Expect = 1e-26
Identities = 116/136 (85%), Gaps = 9/136 (6%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||| |||||||||||||||||| ||| |||||||||||| ||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgatattt 77
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| ||| ||||||||| ||||||||||||||| ||||||||||||||||||
Sbjct: 76 at---------ctaaatttattaatatcaatataaatgtggaaaatgctagaatgactta 26
Query: 123 cattatgaaacggagg 138
|||| |||||||||||
Sbjct: 25 cattgtgaaacggagg 10
>RF00906;MIR1122;AL606446.1/41078-41221 39947:Oryza sativa Japonica
Group
Length = 144
Score = 131 bits (66), Expect = 3e-30
Identities = 121/140 (86%), Gaps = 12/140 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||| ||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 143 tactctctccgtttcacaatgtaagtcattctagcattttc-------atattgatgtta 91
Query: 63 atgaatctagac-----tagatttattaacatcaatataaatgtgagaaatgctagaatg 117
||||||||||| |||||| |||||||||||||| |||||| |||||| |||||||
Sbjct: 90 atgaatctagatatgtttagattcattaacatcaatatgaatgtgggaaatgttagaatg 31
Query: 118 acttacattatgaaacggag 137
||||||||| ||||||||||
Sbjct: 30 acttacattgtgaaacggag 11
Score = 123 bits (62), Expect = 7e-28
Identities = 120/140 (85%), Gaps = 12/140 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||| ||||||||||||||||||||||||||| ||||| ||| ||||||||||||||||
Sbjct: 5 tactctctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatgtta 64
Query: 63 atgaatctaga-----ctagatttattaacatcaatataaatgtgagaaatgctagaatg 117
||||||||| | ||||||| |||||||||||||| | |||||||||||||
Sbjct: 65 atgaatctaaacatatctagattcattaacatcaatatga-------aaatgctagaatg 117
Query: 118 acttacattatgaaacggag 137
||||||||| ||||||||||
Sbjct: 118 acttacattgtgaaacggag 137
>RF00906;MIR1122;AACV01018570.1/9896-10057 39947:Oryza sativa
Japonica Group
Length = 162
Score = 131 bits (66), Expect = 3e-30
Identities = 127/150 (84%), Gaps = 13/150 (8%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||||||||||||||||||||||||||||||||| ||||| || |||||||||||| ||
Sbjct: 159 ttactccctccgtttcacaatgtaagtcattctagtatttttcacattcatattgatttt 100
Query: 62 aatgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaat 108
|||||||||||| ||||||| ||||| |||||||| |||||| |||||
Sbjct: 99 aatgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaat 40
Query: 109 gctagaatgacttacattatgaaacggagg 138
| |||||||||||||||| |||||||||||
Sbjct: 39 gttagaatgacttacattgtgaaacggagg 10
Score = 129 bits (65), Expect = 1e-29
Identities = 126/149 (84%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacatttcccacattcatattgatatta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||| |||||||| ||||||| ||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaaaatcaatatgaatgtgaaaaata 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AP004812.3/16268-16113 39947:Oryza sativa Japonica
Group
Length = 156
Score = 131 bits (66), Expect = 3e-30
Identities = 129/148 (87%), Gaps = 9/148 (6%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||||
Sbjct: 152 tactccctccgtttcacaatgtaagtcattctagccttttccacattcatattgatgtta 93
Query: 63 atgaatctagactagatttat-----ta---acatcaatataaatgtgagaaatgctaga 114
|||| | |||| ||||| || || |||||||||| |||||| ||||||||||
Sbjct: 92 atgagtttaga-tagatacatatgtctagatacatcaatatgaatgtggaaaatgctaga 34
Query: 115 atgacttacattatgaaacggaggaagt 142
|||||||||||| |||||||||||||||
Sbjct: 33 atgacttacattgtgaaacggaggaagt 6
Score = 107 bits (54), Expect = 4e-23
Identities = 123/144 (85%), Gaps = 9/144 (6%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt-- 60
|||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccacattcatattgatgtat 64
Query: 61 -ta-----atgaatctagactagatttattaacatcaatataaatgtgagaaatgctaga 114
|| ||| ||||| ||| | | |||||||||||||| |||||| ||| ||||||
Sbjct: 65 ctagacatatgtatcta-tctaaactcattaacatcaatatgaatgtggaaaaggctaga 123
Query: 115 atgacttacattatgaaacggagg 138
|||||||||||| |||||||||||
Sbjct: 124 atgacttacattgtgaaacggagg 147
>RF00906;MIR1122;AC134344.2/22133-22294 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 129/153 (84%), Gaps = 13/153 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||| ||||| ||| |||||||||||| |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctatcatttcccacattcatattgatatta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||||| |||| |||||||||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaactaatatatgaatgtgagaaatg 124
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
||||||||||||||||| |||||||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggaggaagt 157
Score = 97.6 bits (49), Expect = 4e-20
Identities = 122/149 (81%), Gaps = 13/149 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| || |||||||| ||||
Sbjct: 158 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatatattagtta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||| |||||||| |||||| ||||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaatg 39
Query: 110 ctagaatgacttacattatgaaacggagg 138
|||||||||||||||| |||||||||||
Sbjct: 38 atagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02027999.1/42024-42185 39946:Oryza sativa
Indica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 129/153 (84%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagtcattctagcattacccatattcatatagatgtta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||| ||| ||||||||| |||| ||||| | ||||
Sbjct: 98 atgaatctagacacacatctatatctaaattcattaacatctatatgtatgtgggcaatg 39
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
|||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagt 6
Score = 97.6 bits (49), Expect = 4e-20
Identities = 122/149 (81%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| ||||||||||||||||||||| ||| || ||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattgcccacatacatatagatgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
|||||| |||| ||||||| ||||||||| |||| ||| || | ||||
Sbjct: 65 atgaatttagatatagatgtgtgtctagattcattaacatctatatgaatatgggtaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
|||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagg 153
>RF00906;MIR1122;AP004132.3/69953-70114 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 126/149 (84%), Gaps = 13/149 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||| ||||||||| || ||||| |||||| |||||
Sbjct: 98 atgaatctagacatatatatttagctaaatttattaatataaatatgaatgtggaaaatg 39
Query: 110 ctagaatgacttacattatgaaacggagg 138
||| ||||||||||||| |||||||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagg 10
Score = 121 bits (61), Expect = 3e-27
Identities = 125/149 (83%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||||||||| |||||||||||| ||||||||| || |||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattttccacattcatatttatatta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
|| ||| ||| ||||||| |||||||||||||| |||||| ||||||
Sbjct: 65 ataaatttagctaaatatatatgtctagattcattaacatcaatatgaatgtgggaaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AACV01008600.1/18829-18668 39947:Oryza sativa
Japonica Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 126/149 (84%), Gaps = 13/149 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||| |||||| ||||||||||||||||||| || |||||||||||| |||
Sbjct: 158 tactccctccgttccacaatataagtcattctagcatttttcacattcatattgatatta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||| | ||||||| ||||||| ||||||||||||| ||||||
Sbjct: 98 atgaatctaaatagatatatatgtctagattcattaacaccaatataaatgtgggaaatg 39
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggagg 10
Score = 121 bits (61), Expect = 3e-27
Identities = 125/149 (83%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| ||| ||| |||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattggtgtta 64
Query: 63 atgaatctagac-------------tagatttattaacatcaatataaatgtgagaaatg 109
|||||||||||| |||||| ||||| |||||||| ||||||| |||||
Sbjct: 65 atgaatctagacatatatatctatttagattcattaatatcaatatgaatgtgaaaaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||| ||| || ||||||||
Sbjct: 125 ctagaatgacttatattgtggaacggagg 153
>RF00906;MIR1122;AP003211.3/16612-16773 39947:Oryza sativa Japonica
Group
Length = 162
Score = 129 bits (65), Expect = 1e-29
Identities = 129/153 (84%), Gaps = 13/153 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||||||||| ||||||| ||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagcattacccacattcatattgatgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||||||| ||||| |||||| ||||||
Sbjct: 65 atgaatctagacatatatatctatctagattcattaacattaatatgaatgtgggaaatg 124
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
||| ||||||||| ||| |||||||||||||||
Sbjct: 125 ctaaaatgacttatattgtgaaacggaggaagt 157
Score = 113 bits (57), Expect = 7e-25
Identities = 124/149 (83%), Gaps = 13/149 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||| ||||||||| |||||||| ||| ||||||||| ||||||
Sbjct: 158 tacttcctccgtttcacaatataagtcattttagcatttcccacattcatattaatgtta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||||||||||||| |||||| | ||||
Sbjct: 98 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtgggtaatg 39
Query: 110 ctagaatgacttacattatgaaacggagg 138
||| ||||||||||||| |||||||||||
Sbjct: 38 ctataatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01007157.1/75909-76016 39947:Oryza sativa
Japonica Group
Length = 108
Score = 127 bits (64), Expect = 5e-29
Identities = 95/104 (91%), Gaps = 1/104 (0%)
Strand = Plus / Minus
Query: 24 taagtcattctagcattttccatattcatattgatgttaatgaatctagac-tagattta 82
|||||||||||||||||| || ||||||||||||| |||||||||||||| || ||| |
Sbjct: 104 taagtcattctagcatttctcacattcatattgatgctaatgaatctagacatatattca 45
Query: 83 ttaacatcaatataaatgtgagaaatgctagaatgacttacatt 126
||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 44 ttagcatcaatatgaatgtgagaaatgctagaatgacttacatt 1
Score = 119 bits (60), Expect = 1e-26
Identities = 94/104 (90%), Gaps = 1/104 (0%)
Strand = Plus / Plus
Query: 20 aatgtaagtcattctagcattttccatattcatattgatgttaatgaatcta-gactaga 78
|||||||||||||||||||||| || ||||||||||||| |||||||| || | |||||
Sbjct: 1 aatgtaagtcattctagcatttctcacattcatattgatgctaatgaatatatgtctaga 60
Query: 79 tttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| |||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 61 ttcattagcatcaatatgaatgtgagaaatgctagaatgactta 104
>RF00906;MIR1122;AP008217.1/27688043-27688204 39947:Oryza sativa
Japonica Group
Length = 162
Score = 127 bits (64), Expect = 5e-29
Identities = 125/148 (84%), Gaps = 13/148 (8%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
|||||||||||||||||||||||||||||||||||||||||||| |||||||| | ||||
Sbjct: 159 ttactccctccgtttcacaatgtaagtcattctagcattttccacattcatataggtgtt 100
Query: 62 aatgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaat 108
|||||||||||| ||||||| ||||||| | |||| |||||| |||||
Sbjct: 99 aatgaatctagacatctatatatatctagattcattaacacctatatgaatgtgggaaat 40
Query: 109 gctagaatgacttacattatgaaacgga 136
| ||||||||||||||||||| ||||||
Sbjct: 39 gttagaatgacttacattatggaacgga 12
Score = 89.7 bits (45), Expect = 1e-17
Identities = 121/149 (81%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||| |||||| || |||||||||||||||| ||||| ||| |||||||| | |||||
Sbjct: 5 tactccttccgttccataatgtaagtcattctaacatttcccacattcatataggtgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||||| | |||| |||||| |||||
Sbjct: 65 atgaatctagatatatatagatgtctagattcattaacacctatatgaatgtggaaaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;FJ266028.1/154978-155117 4529:Oryza rufipogon
Length = 140
Score = 127 bits (64), Expect = 5e-29
Identities = 117/136 (86%), Gaps = 9/136 (6%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||| |||||||||||||||||| ||| |||||||||||| ||
Sbjct: 136 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattgatattt 77
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| ||| ||||||||| ||||||||||||||| |||||||||||||||||||
Sbjct: 76 at---------ctaaatttattaatatcaatataaatgtgggaaatgctagaatgactta 26
Query: 123 cattatgaaacggagg 138
|||| |||||||||||
Sbjct: 25 cattgtgaaacggagg 10
Score = 123 bits (62), Expect = 7e-28
Identities = 121/142 (85%), Gaps = 9/142 (6%)
Strand = Plus / Plus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
||||||||||||||||||||||||||||||||||||||||| ||| ||| |||||||| |
Sbjct: 3 gttactccctccgtttcacaatgtaagtcattctagcatttcccacatttatattgatat 62
Query: 61 taatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgact 120
|||| ||| ||| || || |||||||| |||||| |||||||||||||||||
Sbjct: 63 taataaatttag---------ataaatatcaatatgaatgtgggaaatgctagaatgact 113
Query: 121 tacattatgaaacggaggaagt 142
|| ||| |||||||||||||||
Sbjct: 114 tatattgtgaaacggaggaagt 135
>RF00906;MIR1122;AAAA02025818.1/4289-4148 39946:Oryza sativa Indica
Group
Length = 142
Score = 127 bits (64), Expect = 5e-29
Identities = 119/138 (86%), Gaps = 7/138 (5%)
Strand = Plus / Minus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||||||||||||||| | |||||||||||||||| ||||||||| |||| ||| |||||
Sbjct: 140 gttactccctccgttttataatgtaagtcattctaacattttccacattcgtatggatgt 81
Query: 61 taatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgact 120
|| ||||||||||| || ||||| |||| ||||||||||||| ||||||||||
Sbjct: 80 tagtgaatctagac-------atatacatccatatgaatgtgagaaatgttagaatgact 28
Query: 121 tacattatgaaacggagg 138
||||||||||||||||||
Sbjct: 27 tacattatgaaacggagg 10
Score = 77.8 bits (39), Expect = 4e-14
Identities = 112/137 (81%), Gaps = 7/137 (5%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||||||||||||||| |||||||||||||||| ||||| || |||||||| |||||
Sbjct: 4 ttactccctccgtttcataatgtaagtcattctaacatttctcacattcatatggatgta 63
Query: 62 aatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
|| | ||||||| | ||||||| ||| |||||| ||||| |||||||||||
Sbjct: 64 tat-------gtctagattcactaacatccatacgaatgtggaaaatgttagaatgactt 116
Query: 122 acattatgaaacggagg 138
||||||| |||||||||
Sbjct: 117 acattataaaacggagg 133
>RF00906;MIR1122;AP005764.5/63055-63194 39947:Oryza sativa Japonica
Group
Length = 140
Score = 125 bits (63), Expect = 2e-28
Identities = 118/136 (86%), Gaps = 9/136 (6%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctaacattttccatattcatattgatgtta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||| |||| ||| ||||||||| ||| ||| |||| ||| |||||||||
Sbjct: 65 atgaatgtaga-tag--------tcatcaatatgaatatgaaaaatactaaaatgactta 115
Query: 123 cattatgaaacggagg 138
||||||||||||||||
Sbjct: 116 cattatgaaacggagg 131
Score = 95.6 bits (48), Expect = 2e-19
Identities = 116/140 (82%), Gaps = 9/140 (6%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||||||||||||| ||| ||||| ||||||||||||||||
Sbjct: 136 tactccctccgtttcataatgtaagtcattttagtatttttcatattcatattgatgact 77
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| ||| ||| |||||||||||||| ||| || ||||| ||||||||||||
Sbjct: 76 at---------ctacattcattaacatcaatatgaatatggaaaatgttagaatgactta 26
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagt 6
>RF00906;MIR1122;AAAA02005426.1/1175-1330 39946:Oryza sativa Indica
Group
Length = 156
Score = 123 bits (62), Expect = 7e-28
Identities = 128/148 (86%), Gaps = 9/148 (6%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatcgatgtta 64
Query: 63 atgaatctagactagatttat-----ta---acatcaatataaatgtgagaaatgctaga 114
|||| | |||| ||||| || || |||||||||| ||| || ||||||||||
Sbjct: 65 atgagtttaga-tagatacatatgtctagatacatcaatatgaatatggaaaatgctaga 123
Query: 115 atgacttacattatgaaacggaggaagt 142
|||||||||||| |||||||||||||||
Sbjct: 124 atgacttacattgtgaaacggaggaagt 151
Score = 115 bits (58), Expect = 2e-25
Identities = 124/144 (86%), Gaps = 9/144 (6%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt-- 60
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 152 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtat 93
Query: 61 -ta-----atgaatctagactagatttattaacatcaatataaatgtgagaaatgctaga 114
|| ||| ||||| ||| | | ||||||||| |||| |||||| ||||||||||
Sbjct: 92 ctagacatatgtatcta-tctaaactcattaacatcgatatgaatgtggaaaatgctaga 34
Query: 115 atgacttacattatgaaacggagg 138
|||||||||||| |||||||||||
Sbjct: 33 atgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02004640.1/4833-4692 39946:Oryza sativa Indica
Group
Length = 142
Score = 123 bits (62), Expect = 7e-28
Identities = 117/136 (86%), Gaps = 7/136 (5%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||| |||||| ||| |||||||||||||||||||||| ||||||| ||||| ||
Sbjct: 5 tacttcctctgtttcataatataagtcattctagcattttccacattcatactgatgcta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||||||| || | |||||||||| |||||| ||||||||| |||||||||
Sbjct: 65 atgaatctaga-------tagtgacatcaatatgaatgtgggaaatgctacaatgactta 117
Query: 123 cattatgaaacggagg 138
||||||||||||||||
Sbjct: 118 cattatgaaacggagg 133
Score = 105 bits (53), Expect = 2e-22
Identities = 119/140 (85%), Gaps = 7/140 (5%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||||||||||||| |||||||| ||| |||||||||||||| |
Sbjct: 138 tactccctccgtttcataatgtaagtcattgtagcatttcccacattcatattgatgtca 79
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||| ||||||| |||| ||||| ||| |||||| ||||||||||||||||||
Sbjct: 78 ------cta-tctagattcattagcatcagtatgaatgtggaaaatgctagaatgactta 26
Query: 123 cattatgaaacggaggaagt 142
|||||||||| ||||||||
Sbjct: 25 tattatgaaacagaggaagt 6
>RF00906;MIR1122;AP005620.3/106841-106973 39947:Oryza sativa
Japonica Group
Length = 133
Score = 123 bits (62), Expect = 7e-28
Identities = 65/66 (98%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 64
Query: 63 atgaat 68
||||||
Sbjct: 65 atgaat 70
Score = 101 bits (51), Expect = 3e-21
Identities = 115/140 (82%), Gaps = 16/140 (11%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||| |||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 129 tactctctccgtttcataatgtaagtcattctagcattttccatattcatattgatgt-- 72
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||| |||||||||||||| ||| || ||||||||||||||||||
Sbjct: 71 --------------aattcattaacatcaatatgaatatggaaaatgctagaatgactta 26
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagt 6
>RF00906;MIR1122;AACV01001798.1/30232-30103 39947:Oryza sativa
Japonica Group
Length = 130
Score = 123 bits (62), Expect = 7e-28
Identities = 119/140 (85%), Gaps = 11/140 (7%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||| ||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 130 tactccctctgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 71
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||| ||||||||||||||| |||||| |||||||| |||||||||
Sbjct: 70 atgaatc-----------tattaacatcaatatgaatgtggaaaatgctataatgactta 22
Query: 123 cattatgaaacggaggaagt 142
||| |||||| ||||||||
Sbjct: 21 tattgtgaaacagaggaagt 2
Score = 115 bits (58), Expect = 2e-25
Identities = 115/136 (84%), Gaps = 11/136 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||| |||||||||| ||||||||| |||||||||||| ||||||||||||||||
Sbjct: 1 tacttcctctgtttcacaatataagtcattatagcattttccacattcatattgatgtta 60
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| ||||| |||||||||||||| |||||| |||||||||||||||||||
Sbjct: 61 at-----------agattcattaacatcaatatgaatgtgggaaatgctagaatgactta 109
Query: 123 cattatgaaacggagg 138
|||| |||||| ||||
Sbjct: 110 cattgtgaaacagagg 125
>RF00906;MIR1122;AAAA02000417.1/68495-68635 39946:Oryza sativa
Indica Group
Length = 141
Score = 121 bits (61), Expect = 3e-27
Identities = 123/142 (86%), Gaps = 10/142 (7%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcat-tctagcattttccatattcatattgatgt 60
|||||||||||||||||||||||||||| |||| ||||| ||| ||||||||||||||
Sbjct: 4 ttactccctccgtttcacaatgtaagtcccctctaacatttcccacattcatattgatgt 63
Query: 61 taatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgact 120
||||||||||||| ||||| |||||||| ||| || |||||||||||||||||
Sbjct: 64 taatgaatctaga-tagat--------atcaatatgaatatgggaaatgctagaatgact 114
Query: 121 tacattatgaaacggaggaagt 142
|||||| |||||||||||||||
Sbjct: 115 tacattgtgaaacggaggaagt 136
Score = 107 bits (54), Expect = 4e-23
Identities = 119/139 (85%), Gaps = 10/139 (7%)
Strand = Plus / Minus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 139 gttacttcctccgtttcacaatgtaagtcattctagcatttcccatattcatattgat-- 82
Query: 61 taatgaatctagactagatttattaacatcaatataaatgtgagaaatgctaga-atgac 119
||||| ||||||| |||||||||||||| |||||| |||||| |||| |||
Sbjct: 81 ------atcta-tctagattcattaacatcaatatgaatgtgggaaatgttagaggggac 29
Query: 120 ttacattatgaaacggagg 138
||||||| |||||||||||
Sbjct: 28 ttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02028244.1/12095-12254 39946:Oryza sativa
Indica Group
Length = 160
Score = 121 bits (61), Expect = 3e-27
Identities = 127/151 (84%), Gaps = 11/151 (7%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||||||||||||||||||| || ||||||| | ||||||
Sbjct: 156 tactccctccgtttcacaatgtaagtcattctagcatttttcacattcatactcatgtta 97
Query: 63 atgaatctaga-----------ctagatttattaacatcaatataaatgtgagaaatgct 111
||||||||||| ||| ||| |||||||| | ||| |||||| |||||||
Sbjct: 96 atgaatctagatatatatatgtctaaattcattaacatgagtatgaatgtgggaaatgcc 37
Query: 112 agaatgacttacattatgaaacggaggaagt 142
||||||||||| ||| |||||||||||||||
Sbjct: 36 agaatgacttatattgtgaaacggaggaagt 6
Score = 105 bits (53), Expect = 2e-22
Identities = 122/147 (82%), Gaps = 11/147 (7%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||| ||||||||||| |||||| ||| ||||||| | ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctggcatttcccacattcatactcatgtta 64
Query: 63 atgaatctagac-----------tagatttattaacatcaatataaatgtgagaaatgct 111
|||||| ||||| |||||| |||||||| | ||| ||||||| |||||||
Sbjct: 65 atgaatttagacatatatatatctagattcattaacatgagtatgaatgtgaaaaatgct 124
Query: 112 agaatgacttacattatgaaacggagg 138
||||||||||||||| |||||||||||
Sbjct: 125 agaatgacttacattgtgaaacggagg 151
>RF00906;MIR1122;AAAA02009878.1/28326-28188 39946:Oryza sativa
Indica Group
Length = 139
Score = 121 bits (61), Expect = 3e-27
Identities = 119/140 (85%), Gaps = 10/140 (7%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||| ||||||| ||||||||||||||||||||| || ||||||||||||| ||
Sbjct: 5 tactccctctgtttcacgatgtaagtcattctagcatttctcacattcatattgatgcta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||| |||| |||| ||||||||| ||||||||||||||||||||||||||
Sbjct: 65 atga----------gattcattagcatcaatatgaatgtgagaaatgctagaatgactta 114
Query: 123 cattatgaaacggaggaagt 142
||| |||||||||||||||
Sbjct: 115 tattgtgaaacggaggaagt 134
Score = 109 bits (55), Expect = 1e-23
Identities = 116/138 (84%), Gaps = 10/138 (7%)
Strand = Plus / Minus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||||| ||||||||||||||| |||||||||||||||||| || |||||||||||||
Sbjct: 137 gttacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgc 78
Query: 61 taatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgact 120
||||||||| | |||| ||||||||| ||||||||||||||||||||||||
Sbjct: 77 taatgaatc----------tcattagcatcaatatgaatgtgagaaatgctagaatgact 28
Query: 121 tacattatgaaacggagg 138
||||| |||||| ||||
Sbjct: 27 tacatcgtgaaacagagg 10
>RF00906;MIR1122;AACV01021520.1/23851-23690 39947:Oryza sativa
Japonica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 128/153 (83%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| ||||||||| ||| |||| ||| ||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatctaagtcattttagaatttcccacattaatattgatggta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||||| ||||||| |||||| ||||||
Sbjct: 98 atgaatctagaaatatatatctatctagattcattaacgtcaatatgaatgtgggaaatg 39
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
||||||||||||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagt 6
Score = 113 bits (57), Expect = 7e-25
Identities = 124/149 (83%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| ||||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgacgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||| ||||||||| |||||| |||||
Sbjct: 65 atgaatctagatagatatatatttctagattcattaccatcaatattaatgtgggaaatt 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
||| ||||||||| ||| |||||||||||
Sbjct: 125 ctaaaatgacttagattgtgaaacggagg 153
>RF00906;MIR1122;AAAA02000682.1/3832-3993 39946:Oryza sativa Indica
Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 128/153 (83%), Gaps = 13/153 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||||||||||||||||||||| | | |||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattaccaacattcatatagatgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||| ||| ||||||||| ||||| ||||| | ||||
Sbjct: 65 atgaatctagacacacatctatatctaaattcattaacatctatatatatgtgggcaatg 124
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
|||||||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggaggaagt 157
Score = 91.7 bits (46), Expect = 3e-18
Identities = 122/150 (81%), Gaps = 13/150 (8%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| ||||||||||| ||||||||||||||||||||| ||| || |||| ||||||
Sbjct: 159 ttacttcctccgtttcataatgtaagtcattctagcattgcccacatatatatagatgtt 100
Query: 62 aatgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaat 108
||||||| |||| ||||||| ||||||||| |||| ||||| | |||
Sbjct: 99 aatgaatttagatatagatgtgtgtctagattcattaacatctatatgaatgttggtaat 40
Query: 109 gctagaatgacttacattatgaaacggagg 138
||||||||||||||||||||||||||||||
Sbjct: 39 gctagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02008915.1/14402-14269 39946:Oryza sativa
Indica Group
Length = 134
Score = 121 bits (61), Expect = 3e-27
Identities = 119/140 (85%), Gaps = 15/140 (10%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 130 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat-------- 79
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| || || ||| ||||||| |||||| ||||||||||||||||||||||||||
Sbjct: 78 ----atata---tatattcattaacagcaatatgaatgtgagaaatgctagaatgactta 26
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagt 6
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| || |||||||||| |||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgctgtta 64
Query: 63 atgaat 68
||||||
Sbjct: 65 atgaat 70
>RF00906;MIR1122;AAAA02022474.1/18183-18335 39946:Oryza sativa
Indica Group
Length = 153
Score = 121 bits (61), Expect = 3e-27
Identities = 70/73 (95%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||||||||||||||||||| ||||||||| |||||||| |||||||||||||||||||
Sbjct: 150 ttactccctccgtttcacaatataagtcattttagcatttcccatattcatattgatgtt 91
Query: 62 aatgaatctagac 74
|||||||||||||
Sbjct: 90 aatgaatctagac 78
Score = 73.8 bits (37), Expect = 6e-13
Identities = 58/65 (89%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| |||||||||||||| ||| || ||||||||| ||||||||| ||| ||||||
Sbjct: 80 ctagattcattaacatcaatatgaatatgggaaatgctaaaatgacttatattgtgaaac 139
Query: 134 ggagg 138
|||||
Sbjct: 140 ggagg 144
>RF00906;MIR1122;AAAA02019220.1/20048-19887 39946:Oryza sativa
Indica Group
Length = 162
Score = 121 bits (61), Expect = 3e-27
Identities = 128/153 (83%), Gaps = 13/153 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||| |||||||||| | |||||| ||| ||| |||||||||||
Sbjct: 5 tactccctccgtttcacaaagtaagtcatttttgcatttcccacatttatattgatgttt 64
Query: 63 atgaatctagac-------------tagatttattaacatcaatataaatgtgagaaatg 109
|||||||||||| |||||| ||||||||||||||||||||| ||||||
Sbjct: 65 atgaatctagacatatatttctatctagattcattaacatcaatataaatgtgggaaatg 124
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
||| |||||||||| || |||||||||||||||
Sbjct: 125 ctaaaatgacttactttgtgaaacggaggaagt 157
Score = 105 bits (53), Expect = 2e-22
Identities = 123/149 (82%), Gaps = 13/149 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||| |||||||||| |||||||| ||| ||| ||||||||||||
Sbjct: 158 tacttcctccgtttcacaaagtaagtcattttagcatttcccacatttatattgatgtta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| || |||||||||||||||||| ||||||
Sbjct: 98 atgaatctagatagaaatatatgtctagattcataaacatcaatataaatgtgggaaatg 39
Query: 110 ctagaatgacttacattatgaaacggagg 138
| | |||||||||| || |||||||||||
Sbjct: 38 caaaaatgacttactttgtgaaacggagg 10
>RF00906;MIR1122;AY947024.1/140-5 4530:Oryza sativa (rice)
Length = 136
Score = 119 bits (60), Expect = 1e-26
Identities = 118/140 (84%), Gaps = 13/140 (9%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| |||||||||||||||||| ||| ||||||||| ||| ||
Sbjct: 132 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 73
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||||| | |||||||| |||||| |||||||||||||||||||
Sbjct: 72 atgaatctag-------------atatcaatatgaatgtgggaaatgctagaatgactta 26
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagt 6
Score = 95.6 bits (48), Expect = 2e-19
Identities = 112/136 (82%), Gaps = 13/136 (9%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| |
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat-- 62
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||| |||| ||| ||||| |||||| |||||||||||||||||||
Sbjct: 63 -----------ctagattcattagcattaatatgaatgtgggaaatgctagaatgactta 111
Query: 123 cattatgaaacggagg 138
||| |||||||||||
Sbjct: 112 tattgtgaaacggagg 127
>RF00906;MIR1122;AAAA02032259.1/26586-26696 39946:Oryza sativa
Indica Group
Length = 111
Score = 119 bits (60), Expect = 1e-26
Identities = 69/72 (95%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatgtta 64
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| |||||||||||||| |||||| ||||||||||||||||||||||| ||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgggaaatgctagaatgacttacattgtgaaac 15
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 14 ggaggaagt 6
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagt 28
||||||||||||||||||||||||||
Sbjct: 107 tactccctccgtttcacaatgtaagt 82
>RF00906;MIR1122;AAAA02032176.1/1934-1774 39946:Oryza sativa Indica
Group
Length = 161
Score = 119 bits (60), Expect = 1e-26
Identities = 69/72 (95%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||
Sbjct: 157 tactccctccgtttcacaatgtaagtcattctaatattttccacattcatattgatgtta 98
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 97 atgaatctagac 86
Score = 89.7 bits (45), Expect = 1e-17
Identities = 122/149 (81%), Gaps = 14/149 (9%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||| ||||||||||| ||||||| ||| ||| |||||||||||| |||
Sbjct: 5 tactccctccgttttacaatgtaagttattctag-ttttcccacattcatattgatatta 63
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||||||||||||| |||||| ||||
Sbjct: 64 atgaatctagatagatatatatgtctagattcattaacatcaatatgaatgtggaaaata 123
Query: 110 ctagaatgacttacattatgaaacggagg 138
|||||||||||||||| |||||||||||
Sbjct: 124 ttagaatgacttacattgtgaaacggagg 152
>RF00906;MIR1122;AP003491.3/121978-121836 39947:Oryza sativa
Japonica Group
Length = 143
Score = 119 bits (60), Expect = 1e-26
Identities = 118/136 (86%), Gaps = 6/136 (4%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||||||| | | ||||||||||||
Sbjct: 139 tactccctccgtttcacaatgtaagtcattctagcattttccacaattatattgatgtta 80
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| |||||| | |||| || |||||||||| ||||| |||||||| |||||||||
Sbjct: 79 ataaatctata-taga-----tactatcaatataattgtgaaaaatgctaaaatgactta 26
Query: 123 cattatgaaacggagg 138
|||| ||||| |||||
Sbjct: 25 cattgtgaaatggagg 10
Score = 111 bits (56), Expect = 3e-24
Identities = 117/136 (86%), Gaps = 6/136 (4%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||| ||||||||||||||||||| ||||||||| || | | |||||||| ||
Sbjct: 5 tactccctccatttcacaatgtaagtcattttagcatttttcacaattatattgatagta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||| | ||||||||||||||||||||||| |||| ||||||||||||||||||
Sbjct: 65 -----tctata-tagatttattaacatcaatataattgtggaaaatgctagaatgactta 118
Query: 123 cattatgaaacggagg 138
|||| |||||||||||
Sbjct: 119 cattgtgaaacggagg 134
>RF00906;MIR1122;AACV01021328.1/31319-31454 39947:Oryza sativa
Japonica Group
Length = 136
Score = 119 bits (60), Expect = 1e-26
Identities = 118/140 (84%), Gaps = 13/140 (9%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| |||||||||||||||||| ||| ||||||||| ||| ||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattaatgcta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||||| | |||||||| |||||| |||||||||||||||||||
Sbjct: 65 atgaatctag-------------atatcaatatgaatgtgggaaatgctagaatgactta 111
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 112 cattgtgaaacggaggaagt 131
Score = 95.6 bits (48), Expect = 2e-19
Identities = 112/136 (82%), Gaps = 13/136 (9%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| |||||||||||| |
Sbjct: 132 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattgatat-- 75
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||| |||| ||| ||||| |||||| |||||||||||||||||||
Sbjct: 74 -----------ctagattcattagcattaatatgaatgtgggaaatgctagaatgactta 26
Query: 123 cattatgaaacggagg 138
||| |||||||||||
Sbjct: 25 tattgtgaaacggagg 10
>RF00906;MIR1122;AP004224.3/123495-123660 39947:Oryza sativa
Japonica Group
Length = 166
Score = 119 bits (60), Expect = 1e-26
Identities = 69/72 (95%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| ||| ||||||| ||||||||
Sbjct: 162 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatagtgatgtta 103
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 102 atgaatctagac 91
Score = 111 bits (56), Expect = 3e-24
Identities = 127/153 (83%), Gaps = 17/153 (11%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat----tgat 58
|||| |||||||||||||||||||||||||||||||||| |||||||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcgcatattcatacatagtgat 64
Query: 59 gttaatgaatctaga-------------ctagatttattaacatcaatataaatgtgaga 105
||||||||||||||| ||||||| |||||||||| ||| |||||| ||
Sbjct: 65 gttaatgaatctagatagatatatatgtctagattcattaacatcactatgaatgtggga 124
Query: 106 aatgctagaatgacttacattatgaaacggagg 138
||||||||||||||||||||| |||||||||||
Sbjct: 125 aatgctagaatgacttacattgtgaaacggagg 157
>RF00906;MIR1122;AACV01017229.1/6664-6798 39947:Oryza sativa
Japonica Group
Length = 135
Score = 119 bits (60), Expect = 1e-26
Identities = 119/140 (85%), Gaps = 14/140 (10%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||||| |||||||||||||||| |||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgatgtt- 63
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||||| ||||||||||| ||| || ||||||||||||||||||
Sbjct: 64 atgaatcta-------------aacatcaatatgaatatggaaaatgctagaatgactta 110
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 111 cattgtgaaacggaggaagt 130
Score = 111 bits (56), Expect = 3e-24
Identities = 115/136 (84%), Gaps = 14/136 (10%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt- 73
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||| | |||||||||||| |||||| |||||||||||| |||||
Sbjct: 72 ------------tagattca-taacatcaatatgaatgtggaaaatgctagaataactta 26
Query: 123 cattatgaaacggagg 138
|||| |||||||||||
Sbjct: 25 cattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02035929.1/12415-12280 39946:Oryza sativa
Indica Group
Length = 136
Score = 119 bits (60), Expect = 1e-26
Identities = 118/140 (84%), Gaps = 13/140 (9%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||| |||||||||||||||| |||||||| ||||||| ||||||||| ||
Sbjct: 5 tactccctccgttccacaatgtaagtcattatagcatttcccatatttatattgatgcta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||||| |||||||||| |||||| |||||||||||||| ||||
Sbjct: 65 atgaatctag-------------acatcaatatgaatgtgggaaatgctagaatgtctta 111
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 112 cattgtgaaacggaggaagt 131
Score = 95.6 bits (48), Expect = 2e-19
Identities = 112/136 (82%), Gaps = 13/136 (9%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||| ||||||||||||| ||| ||||||||||||||
Sbjct: 132 tacttcctccgtttcacaatgtaagacattctagcatttcccacattcatattgatgt-- 75
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||| |||| ||||||||||||| || ||||||||| |||||||||
Sbjct: 74 -----------ctagattcattagcatcaatataaatatgggaaatgctataatgactta 26
Query: 123 cattatgaaacggagg 138
|||| || ||||||||
Sbjct: 25 cattgtggaacggagg 10
>RF00906;MIR1122;AP003932.3/46760-46610 39947:Oryza sativa Japonica
Group
Length = 151
Score = 117 bits (59), Expect = 5e-26
Identities = 122/142 (85%), Gaps = 2/142 (1%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||| | |||||||||| ||| || ||||| |||||||
Sbjct: 147 tactccctccgtttcataatgtaagactttctagcattgcccacatacatatagatgtta 88
Query: 63 atgaatcta--gactagatttattaacatcaatataaatgtgagaaatgctagaatgact 120
||||||||| | ||||||| ||||||||| | | |||||||| |||||||||| | ||
Sbjct: 87 atgaatctagtgtctagattcattaacatctaagtgaatgtgagcaatgctagaaagtct 28
Query: 121 tacattatgaaacggaggaagt 142
|||||| |||||||||||||||
Sbjct: 27 tacattgtgaaacggaggaagt 6
Score = 109 bits (55), Expect = 1e-23
Identities = 118/138 (85%), Gaps = 2/138 (1%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||| | |||||||||| || ||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgctcacattcacttagatgtta 64
Query: 63 atgaatctagac--tagatttattaacatcaatataaatgtgagaaatgctagaatgact 120
|||||||||||| |||||| ||||||||| |||| ||||| | |||||||||| | ||
Sbjct: 65 atgaatctagacactagattcattaacatctatatgtatgtgggcaatgctagaaagtct 124
Query: 121 tacattatgaaacggagg 138
||||||||||||||||||
Sbjct: 125 tacattatgaaacggagg 142
>RF00906;MIR1122;AP004801.3/81541-81678 39947:Oryza sativa Japonica
Group
Length = 138
Score = 117 bits (59), Expect = 5e-26
Identities = 68/71 (95%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||| ||||||||||||||||||||||||| ||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtccttctagcattttccatattcatattaatgtta 75
Query: 63 atgaatctaga 73
|||||||||||
Sbjct: 74 atgaatctaga 64
Score = 91.7 bits (46), Expect = 3e-18
Identities = 117/141 (82%), Gaps = 11/141 (7%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||||||||||||||| |||||||||||||||| ||||||||| |||||||| || ||
Sbjct: 4 ttactccctccgtttcataatgtaagtcattctatcattttccacattcatat--atatt 61
Query: 62 aatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
|| ||||||| |||||||| ||||| ||| || ||||||||||| |||||
Sbjct: 62 cat---------ctagattcattaacattaatatgaatatggaaaatgctagaaggactt 112
Query: 122 acattatgaaacggaggaagt 142
||||| |||||||||||||||
Sbjct: 113 acattgtgaaacggaggaagt 133
>RF00906;MIR1122;AC111015.2/7663-7824 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 124/149 (83%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||| |||||||||||| | ||||||| ||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctaactttttccacattcatattaatgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||| |||||||| |||||| ||||||
Sbjct: 65 atgaatctagataaatatatatatctagattcattaatatcaatatgaatgtgggaaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||| ||| |||||||||||
Sbjct: 125 ctagaatgacttatattgtgaaacggagg 153
Score = 113 bits (57), Expect = 7e-25
Identities = 127/153 (83%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| |||||||||||||||||| ||| |||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgatatta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||||||| ||||| |||||| ||| |
Sbjct: 98 atgaatctagatatatatatttatctagattcattaacattaatatgaatgtggaaaaag 39
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
|||||||||||| ||| |||||||||||||||
Sbjct: 38 ttagaatgacttatattgtgaaacggaggaagt 6
>RF00906;MIR1122;CR855160.1/93205-93044 4530:Oryza sativa (rice)
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 124/149 (83%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| ||||||| | || |||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatacttatatta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||| ||||||||| ||||||||||||
Sbjct: 65 atgaatctagacggatatatatgtctagattcattagcatcaatatggatgtgagaaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
||| ||||||||||||| |||||||||||
Sbjct: 125 ctaaaatgacttacattgtgaaacggagg 153
Score = 113 bits (57), Expect = 7e-25
Identities = 127/153 (83%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||||||||| |||||||| || || |||||||||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattttagcatttctcacatccatattgatgcta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||| || | ||| |||||| ||||||
Sbjct: 98 atgaatctagacatatatatccgtctagattcattaatataagtatgaatgtgggaaatg 39
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
||||||||||||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagt 6
>RF00906;MIR1122;AACV01013006.1/1091-1250 39947:Oryza sativa
Japonica Group
Length = 160
Score = 113 bits (57), Expect = 7e-25
Identities = 123/147 (83%), Gaps = 11/147 (7%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||||||||||||| |||||||| ||| |||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatgtagatgtta 64
Query: 63 atgaatctagac-----------tagatttattaacatcaatataaatgtgagaaatgct 111
||||||| |||| |||||| ||||||||| |||| ||||||| |||||||
Sbjct: 65 atgaatcaagacatatatatgcatagattcattaacatctatatgaatgtgaaaaatgct 124
Query: 112 agaatgacttacattatgaaacggagg 138
| |||||||| ||||||||||||||||
Sbjct: 125 aaaatgacttgcattatgaaacggagg 151
Score = 105 bits (53), Expect = 2e-22
Identities = 125/151 (82%), Gaps = 11/151 (7%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||| |||||||| ||||||||| || |||||||| |||||||
Sbjct: 156 tactccctccgtttcataatgcaagtcattttagcatttttcacattcatatagatgtta 97
Query: 63 atgaatcta-----------gactagatttattaacatcaatataaatgtgagaaatgct 111
||||||||| | || |||| ||||||||| | || |||||| ||||||||
Sbjct: 96 atgaatctatgcatatatatgtcttgattcattaacatctacatgaatgtgggaaatgct 37
Query: 112 agaatgacttacattatgaaacggaggaagt 142
| ||||||||||||| |||||||||||||||
Sbjct: 36 aaaatgacttacattgtgaaacggaggaagt 6
>RF00906;MIR1122;AAAA02021768.1/34563-34436 39946:Oryza sativa
Indica Group
Length = 128
Score = 113 bits (57), Expect = 7e-25
Identities = 66/69 (95%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgtta 64
Query: 63 atgaatcta 71
|||||||||
Sbjct: 65 atgaatcta 73
Score = 87.7 bits (44), Expect = 4e-17
Identities = 59/64 (92%)
Strand = Plus / Minus
Query: 75 tagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacg 134
|||||| ||||||||| |||| |||||| ||||||||||||||||||||||| |||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggaaatgctagaatgacttacattgtgaaacg 14
Query: 135 gagg 138
||||
Sbjct: 13 gagg 10
Score = 87.7 bits (44), Expect = 4e-17
Identities = 50/52 (96%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 54
||||||||||||||||||||||||||||||||||||||| ||| ||||||||
Sbjct: 124 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatat 73
>RF00906;MIR1122;AP002866.1/46564-46725 39947:Oryza sativa Japonica
Group
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 124/149 (83%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||| |||| |||| |||||| ||||
Sbjct: 65 atgaatctagacatatatatttatctagattcattagcatcgatatggatgtgaaaaata 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
|||||||||||||||||||||||||||||
Sbjct: 125 ctagaatgacttacattatgaaacggagg 153
Score = 101 bits (51), Expect = 3e-21
Identities = 124/151 (82%), Gaps = 13/151 (8%)
Strand = Plus / Minus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||||||||||||||||| ||||||||||||||||| ||||| || || ||||| ||||
Sbjct: 160 gttactccctccgtttcataatgtaagtcattctagtatttttcacatccatatcgatgc 101
Query: 61 taatgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaa 107
||||||||||||| ||||||| ||| |||| |||| |||||| |||
Sbjct: 100 taatgaatctagataaatatatatgtctagattcattggcatcgatatgaatgtggaaaa 41
Query: 108 tgctagaatgacttacattatgaaacggagg 138
|||||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AACV01021901.1/3791-3658 39947:Oryza sativa
Japonica Group
Length = 134
Score = 113 bits (57), Expect = 7e-25
Identities = 66/69 (95%)
Strand = Plus / Minus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| |||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 74 ctagattcattaacatcaatatgaatgtgagaaatactagaatgacttacattatgaaac 15
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 14 ggaggaagt 6
Score = 99.6 bits (50), Expect = 1e-20
Identities = 112/136 (82%), Gaps = 15/136 (11%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| ||||||||||||||||| |||| || ||||||||||||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagtatttctcacattcatattgatgtta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||||||| ||||| ||||||||||||||||||||||||||
Sbjct: 65 atgaatctagac---------------aaatatgaatgtgagaaatgctagaatgactta 109
Query: 123 cattatgaaacggagg 138
|||||||||| |||||
Sbjct: 110 cattatgaaatggagg 125
>RF00906;MIR1122;CR855046.1/58437-58598 4530:Oryza sativa (rice)
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 124/149 (83%), Gaps = 13/149 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| ||| |||||||| ||||||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatagatgttg 99
Query: 63 atgaatcta-------------gactagatttattaacatcaatataaatgtgagaaatg 109
||||||||| | ||||||| ||||||||| |||| |||||||||||||
Sbjct: 98 atgaatctaaatatatatagatgtctagattcattaacatctatatgaatgtgagaaatg 39
Query: 110 ctagaatgacttacattatgaaacggagg 138
|| ||||||||||| | |||||||||||
Sbjct: 38 ataaaatgacttacaatgtgaaacggagg 10
Score = 105 bits (53), Expect = 2e-22
Identities = 123/149 (82%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||| ||||||||||| || ||||| || |||||||| |||||||
Sbjct: 5 tactccctccgtttcacattgtaagtcattttatcatttctcacattcatatagatgtta 64
Query: 63 atgaatctagac-------------tagatttattaacatcaatataaatgtgagaaatg 109
|||||||||||| |||||| || |||||| |||| |||||| ||||||
Sbjct: 65 atgaatctagacatctatatatatttagattcatcaacatctatatgaatgtgggaaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||||||||||
Sbjct: 125 ctagaatgacttacattgtgaaacggagg 153
>RF00906;MIR1122;AP005719.3/148604-148741 39947:Oryza sativa
Japonica Group
Length = 138
Score = 113 bits (57), Expect = 7e-25
Identities = 119/140 (85%), Gaps = 11/140 (7%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||| ||||||||||||||||||||||| | |||||||||| ||||||||||||||
Sbjct: 5 tactccatccgtttcacaatgtaagtcattttggcattttccacattcatattgatgt-- 62
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||| || || |||||||||||||| |||||| ||||||||| |||||||||
Sbjct: 63 ----atcttga-----ttcattaacatcaatatgaatgtgggaaatgctaaaatgactta 113
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 114 cattgtgaaacggaggaagt 133
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||||||||||||| |||||||| ||| ||||||||||||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatattgatgtta 75
Query: 63 atgaatc 69
|||||||
Sbjct: 74 atgaatc 68
>RF00906;MIR1122;AC082645.13/91702-91541 4530:Oryza sativa (rice)
Length = 162
Score = 113 bits (57), Expect = 7e-25
Identities = 124/149 (83%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||| ||||||||| |||||||| ||| ||||||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatataagtcattgtagcatttcccacattcatatttatgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||| ||||||||||||||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattatcatcaatataaatgtgaaaaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
|||||||| |||| ||| |||||||||||
Sbjct: 125 ctagaatggcttatattgtgaaacggagg 153
Score = 113 bits (57), Expect = 7e-25
Identities = 127/153 (83%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| |||| |||||||||||||| || ||| ||||||||| ||
Sbjct: 158 tactccctccgtttcacaatataagccattctagcatttttcacatttatattgatgata 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||||||| ||||| |||||| ||||||
Sbjct: 98 atgaatctagacatatatatctatctagattcattaacataaatatgaatgtgggaaatg 39
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
||| ||||||||| ||| |||||||||||||||
Sbjct: 38 ctacaatgacttatattgtgaaacggaggaagt 6
>RF00906;MIR1122;AAAA02029606.1/4225-4368 39946:Oryza sativa Indica
Group
Length = 144
Score = 111 bits (56), Expect = 3e-24
Identities = 119/140 (85%), Gaps = 5/140 (3%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||| |||| | |||||||||| |||||||||||| |||| ||
Sbjct: 140 tactccctccgtttcataatataagactttctagcattacccatattcatatagatgcta 81
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||| |||||| ||||||||| |||| ||| |||| |||||||||| ||||||
Sbjct: 80 atgaatc-----tagattcattaacatctatatgaatatgagcaatgctagaaagactta 26
Query: 123 cattatgaaacggaggaagt 142
|||||||||| ||||||||
Sbjct: 25 tattatgaaacagaggaagt 6
Score = 79.8 bits (40), Expect = 1e-14
Identities = 112/136 (82%), Gaps = 5/136 (3%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||| |||||| ||| |||||| |||||||||| ||||||||||| |||||||
Sbjct: 5 tacttcctctgtttcataatataagtctttctagcattgctcatattcatatagatgtta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||||||| || |||| |||| |||| ||| || | |||||||||| | ||||
Sbjct: 65 atgaatctaga-----ttcattagcatctatatgaatatgggtaatgctagaaagtctta 119
Query: 123 cattatgaaacggagg 138
|||||||||||||||
Sbjct: 120 tattatgaaacggagg 135
>RF00906;MIR1122;AACV01018808.1/29876-29745 39947:Oryza sativa
Japonica Group
Length = 132
Score = 111 bits (56), Expect = 3e-24
Identities = 62/64 (96%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||||||||| |||||||||||| ||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattttccacattcatattgatgtta 64
Query: 63 atga 66
||||
Sbjct: 65 atga 68
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||| | ||| |||||||||||| ||||||||||||||||
Sbjct: 128 tactccctccgtttcacaatgtaatttattttagcattttccacattcatattgatgtta 69
>RF00906;MIR1122;AP008217.1/8435064-8435202 39947:Oryza sativa
Japonica Group
Length = 139
Score = 111 bits (56), Expect = 3e-24
Identities = 116/136 (85%), Gaps = 10/136 (7%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| ||||||||| || |||
Sbjct: 135 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatttatatta 76
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||||||| || ||| ||||| |||||| |||||||||||||||||||
Sbjct: 75 atgaatctagac---atatat-------aatatgaatgtgggaaatgctagaatgactta 26
Query: 123 cattatgaaacggagg 138
|||| ||||| |||||
Sbjct: 25 cattgtgaaatggagg 10
Score = 103 bits (52), Expect = 7e-22
Identities = 118/140 (84%), Gaps = 10/140 (7%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||| |||||||||||||||||||||||||||| ||| |||||||||
Sbjct: 5 tactccctccatttcacaatgtaagtcattctagcatttcccacattcatatt------- 57
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| || | ||||||| ||||| || ||||| |||||| |||||||||||||||||||
Sbjct: 58 atatatgt---ctagattcattaatataaatatgaatgtgggaaatgctagaatgactta 114
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 115 cattgtgaaacggaggaagt 134
>RF00906;MIR1122;AAAA02005296.1/3507-3647 39946:Oryza sativa Indica
Group
Length = 141
Score = 109 bits (55), Expect = 1e-23
Identities = 118/140 (84%), Gaps = 8/140 (5%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||| |||||||||| |||||||| | |||||||||| |||||||| |||| |||||||
Sbjct: 137 tactctctccgtttcataatgtaagactttctagcattgtccatatttatatagatgtta 78
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||||||| ||||||| ||||||||||| | |||||||||| | ||||
Sbjct: 77 atgaatctagac--------ataacatctatataaatgtgggcaatgctagaaagtctta 26
Query: 123 cattatgaaacggaggaagt 142
||||||||||||||| ||||
Sbjct: 25 cattatgaaacggagaaagt 6
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| ||||||||| |||||||| || |||||||||| | |||||||||||||||
Sbjct: 68 ctagattcattaacatctatataaatatggacaatgctagaaagtcttacattatgaaac 127
Query: 134 ggag 137
||||
Sbjct: 128 ggag 131
>RF00906;MIR1122;AC098572.2/23110-23250 39947:Oryza sativa Japonica
Group
Length = 141
Score = 109 bits (55), Expect = 1e-23
Identities = 118/140 (84%), Gaps = 8/140 (5%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||||||||| ||||||||||| |||| |||||||| |||||||
Sbjct: 137 tactccctccgtttcataatgtaagttattctagcattgtccacattcatatagatgtta 78
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| ||||||||| || |||| || | |||||| | ||||||||||| |||||
Sbjct: 77 ataaatctagac--------atagcatctatgtgaatgtgggcaatgctagaataactta 26
Query: 123 cattatgaaacggaggaagt 142
||||||||||||||||||||
Sbjct: 25 cattatgaaacggaggaagt 6
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||||||||||||| |||| |||||| ||||||||||| ||||||||||||||||
Sbjct: 68 ctagatttattaacatctatatgaatgtggacaatgctagaataacttacattatgaaac 127
Query: 134 ggagg 138
|||||
Sbjct: 128 ggagg 132
>RF00906;MIR1122;AAAA02022015.1/31010-31136 39946:Oryza sativa
Indica Group
Length = 127
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 123 tactccctccgtttcataatgtaagtcattctagcatttcctacattcatattgatgtta 64
Query: 63 atgaatctaga 73
|||||||||||
Sbjct: 63 atgaatctaga 53
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| |||||||||||||| ||||| ||||||||||||||||||||||||||||||
Sbjct: 54 ctagattcattaacatcaatatgaatgtaggaaatgctagaatgacttacattatgaaac 113
Query: 134 ggagg 138
|||||
Sbjct: 114 ggagg 118
Score = 85.7 bits (43), Expect = 2e-16
Identities = 46/47 (97%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatatt 49
|||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattttccatatt 51
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 105 aaatgctagaatgacttacattatgaaacggaggaagt 142
|||||||||||||||||||||| |||||||||||||||
Sbjct: 43 aaatgctagaatgacttacattgtgaaacggaggaagt 6
>RF00906;MIR1122;AAAA02024103.1/2739-2606 39946:Oryza sativa Indica
Group
Length = 134
Score = 109 bits (55), Expect = 1e-23
Identities = 67/71 (94%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||| |||||||||| |||| ||||||||| ||||||||||||||||
Sbjct: 130 tactccctccgtttcaccatgtaagtcactctaacattttccacattcatattgatgtta 71
Query: 63 atgaatctaga 73
|||||||||||
Sbjct: 70 atgaatctaga 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| |||||||||||||| |||||| ||||| |||| |||||||||| ||||||
Sbjct: 61 ctagattcattaacatcaatatgaatgtggaaaatgttagagtgacttacatggtgaaac 120
Query: 134 ggagg 138
|||||
Sbjct: 121 ggagg 125
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 54
||||||||||||||||||||| |||||| | |||||||| |||||||||||
Sbjct: 5 tactccctccgtttcacaatgaaagtcaatttagcatttctcatattcatat 56
>RF00906;MIR1122;AAAA02030781.1/9759-9620 39946:Oryza sativa Indica
Group
Length = 140
Score = 109 bits (55), Expect = 1e-23
Identities = 119/140 (85%), Gaps = 9/140 (6%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 136 tacttcctccgtttcacaatgcaagtcattttagcatttcccatattcatattgatgtta 77
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| ||||||||| |||| || ||| | |||||| ||||| ||||||| |||||
Sbjct: 76 ataaatctagac---attt------ataaatgtgaatgtgggaaatactagaataactta 26
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagt 6
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
|||||||||||||||||||||| ||| || ||||||||| |||||||| |||| ||||||
Sbjct: 67 ctagatttattaacatcaatatgaatatgggaaatgctaaaatgacttgcattgtgaaac 126
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 127 ggaggaagt 135
>RF00906;MIR1122;AAAA02004628.1/54560-54721 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 63/66 (95%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||||||| |||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagtcattctagcattttccacattcatatagatgcta 99
Query: 63 atgaat 68
||||||
Sbjct: 98 atgaat 93
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||| ||||||| |||||||||| |||| ||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctaacattttctatattcatatagatgcta 64
Query: 63 atgaatcta 71
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AAAA02004745.1/86622-86461 39946:Oryza sativa
Indica Group
Length = 162
Score = 107 bits (54), Expect = 4e-23
Identities = 124/150 (82%), Gaps = 13/150 (8%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||||||||||||||| |||||||||||||||||||||| | |||||||||| || |||
Sbjct: 4 ttactccctccgtttcataatgtaagtcattctagcatttcctatattcatatagaggtt 63
Query: 62 aatgaatcta-------------gactagatttattaacatcaatataaatgtgagaaat 108
| |||||||| | ||||||| | |||| || |||| |||||| |||||
Sbjct: 64 agtgaatctatatagatatatatgtctagattcactaacctccatatgaatgtgggaaat 123
Query: 109 gctagaatgacttacattatgaaacggagg 138
||||||||||||||||||||||||||||||
Sbjct: 124 gctagaatgacttacattatgaaacggagg 153
Score = 95.6 bits (48), Expect = 2e-19
Identities = 121/148 (81%), Gaps = 13/148 (8%)
Strand = Plus / Minus
Query: 4 actccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaa 63
||||||||||||||| |||||||||||||||||||||| ||| |||||||| || ||||
Sbjct: 157 actccctccgtttcataatgtaagtcattctagcatttcccacattcatatggaggttag 98
Query: 64 tgaatctagac-------------tagatttattaacatcaatataaatgtgagaaatgc 110
||||||||||| |||||| | |||| || |||| ||| | |||||||
Sbjct: 97 tgaatctagacatatatatctatatagattcactaacctctatatgaatataggaaatgc 38
Query: 111 tagaatgacttacattatgaaacggagg 138
||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AP004258.3/156327-156194 39947:Oryza sativa
Japonica Group
Length = 134
Score = 107 bits (54), Expect = 4e-23
Identities = 116/140 (82%), Gaps = 15/140 (10%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||||||||| ||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
| | ||||||||| |||| |||||| |||||||||||||||||||
Sbjct: 65 ---------------actcattaacatcgatatgaatgtgggaaatgctagaatgactta 109
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 110 cattgtgaaacggaggaagt 129
Score = 99.6 bits (50), Expect = 1e-20
Identities = 112/136 (82%), Gaps = 15/136 (11%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| |||||||| |||||||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatatcgatgtta 71
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||| |||||||| |||| |||||| |||||||||||||||||||
Sbjct: 70 atga---------------gttaacatcgatatgaatgtgggaaatgctagaatgactta 26
Query: 123 cattatgaaacggagg 138
|||| |||||||||||
Sbjct: 25 cattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02034059.1/74410-74542 39946:Oryza sativa
Indica Group
Length = 133
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Plus
Query: 82 attaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaag 141
|||||||||||||| |||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 68 attaacatcaatatgaatgtgggaaatgctagaatgacttacattatgaaacggaggaag 127
Query: 142 t 142
|
Sbjct: 128 t 128
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||||||||||||||||| ||| ||||||||||||||||
Sbjct: 129 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatgtta 70
Query: 63 atgaatctagac 74
||| ||||||||
Sbjct: 69 atggatctagac 58
Score = 52.0 bits (26), Expect = 2e-06
Identities = 26/26 (100%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagt 28
||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagt 30
>RF00906;MIR1122;AC123528.2/111745-111906 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 123/149 (82%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||||||||||||| |||||| || ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtattttcactagaaatattgatgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||| |||||||| |||||| |||||
Sbjct: 65 atgaatctagatagatatatatgtctagattcattaatatcaatatgaatgtgggaaata 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
|||||||| |||||||| |||||||||||
Sbjct: 125 ctagaatgtcttacattgtgaaacggagg 153
Score = 103 bits (52), Expect = 7e-22
Identities = 67/72 (93%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||| |||||||| |||| ||| |||||||||||| |||
Sbjct: 158 tactccctccgtttcacaatgtaagacattctagtatttcccacattcatattgatatta 99
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 98 atgaatctagac 87
>RF00906;MIR1122;AACV01016079.1/9825-9954 39947:Oryza sativa
Japonica Group
Length = 130
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||||||||||||||||| ||||||||||||||| |||
Sbjct: 126 tactccctccgtttcataatgtaagtcattctagcatttctcatattcatattgatatta 67
Query: 63 atgaatcta 71
|||||||||
Sbjct: 66 atgaatcta 58
Score = 95.6 bits (48), Expect = 2e-19
Identities = 60/64 (93%)
Strand = Plus / Plus
Query: 75 tagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacg 134
|||||| ||||| |||||||| ||| ||||||||||||||||||||||||||||||||||
Sbjct: 58 tagattcattaatatcaatatgaatatgagaaatgctagaatgacttacattatgaaacg 117
Query: 135 gagg 138
||||
Sbjct: 118 gagg 121
>RF00906;MIR1122;FJ581044.1/8310-8181 4538:Oryza glaberrima
(African rice)
Length = 130
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||||| |||||||||||||||| | | ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacaattatattgatgtta 64
Query: 63 atgaatcta 71
|||||||||
Sbjct: 65 atgaatcta 73
Score = 79.8 bits (40), Expect = 1e-14
Identities = 58/64 (90%)
Strand = Plus / Minus
Query: 75 tagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacg 134
|||||| |||||||||||||||| |||| |||||||||||| ||||||||| |||||||
Sbjct: 73 tagattcattaacatcaatataattgtggaaaatgctagaataacttacattgtgaaacg 14
Query: 135 gagg 138
||||
Sbjct: 13 gagg 10
Score = 58.0 bits (29), Expect = 4e-08
Identities = 29/29 (100%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcat 31
|||||||||||||||||||||||||||||
Sbjct: 126 tactccctccgtttcacaatgtaagtcat 98
>RF00906;MIR1122;AACV01023372.1/6803-6964 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 124/151 (82%), Gaps = 13/151 (8%)
Strand = Plus / Plus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||| |||||||||||||||||||||||||||||||||| | || ||||||||||| |
Sbjct: 3 gttattccctccgtttcacaatgtaagtcattctagcatntctcacattcatattgaaat 62
Query: 61 taatgaatctagac-------------tagatttattaacatcaatataaatgtgagaaa 107
||||||||||| |||||| ||| |||||||||| |||||||||||
Sbjct: 63 cgntgaatctagacatacatatatgtctagattcattgacatcaatatgaatgtgagaaa 122
Query: 108 tgctagaatgacttacattatgaaacggagg 138
||||||||||||||||||| |||||||||||
Sbjct: 123 tgctagaatgacttacattgtgaaacggagg 153
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Minus
Query: 6 tccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatg 65
|||||||||||||||||||||||||||||||||||| || |||||||||||||| ||||
Sbjct: 155 tccctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgtcaatg 96
Query: 66 aatctagac 74
|||||||||
Sbjct: 95 aatctagac 87
>RF00906;MIR1122;AAAA02003204.1/17037-17198 39946:Oryza sativa
Indica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 123/149 (82%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||||||||||||||||||||| |||||||| |||| |
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattttccacattcatatcgatgcca 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| |||| ||||||||| |||||| |||
Sbjct: 65 atgaatctagacatatatatctatctagattcattagcatcaatatggatgtgaacaata 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
||||||||||||||||||||||||||||
Sbjct: 125 gtagaatgacttacattatgaaacggagg 153
Score = 93.7 bits (47), Expect = 7e-19
Identities = 123/151 (81%), Gaps = 13/151 (8%)
Strand = Plus / Minus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||||||||||||||||| |||||||||||||||| ||| | || || ||||||||||
Sbjct: 160 gttactccctccgtttcataatgtaagtcattctactattgttcacatccatattgatgc 101
Query: 61 taatgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaa 107
||||||||||||| ||||||| ||| |||| |||| |||||| |||
Sbjct: 100 taatgaatctagatagatatatatgtctagattcattggcatcgatatgaatgtggaaaa 41
Query: 108 tgctagaatgacttacattatgaaacggagg 138
|||||||||||||||||||||||||||||||
Sbjct: 40 tgctagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AACV01004867.1/28532-28374 39947:Oryza sativa
Japonica Group
Length = 159
Score = 105 bits (53), Expect = 2e-22
Identities = 123/148 (83%), Gaps = 10/148 (6%)
Strand = Plus / Plus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||||| ||||||||||||||| ||||||||||||| |||| ||| ||||||||||||
Sbjct: 3 gttacttcctccgtttcacaatataagtcattctagtatttcccacattcatattgatac 62
Query: 61 taatgaatctaga----------ctagatttattaacatcaatataaatgtgagaaatgc 110
||||||||||||| |||||| ||| ||||||||| |||||| ||||||
Sbjct: 63 taatgaatctagatagatatagtctagatccattggcatcaatatgaatgtgggaaatgg 122
Query: 111 tagaatgacttacattatgaaacggagg 138
| ||||||||||||||||||||||||||
Sbjct: 123 tggaatgacttacattatgaaacggagg 150
Score = 101 bits (51), Expect = 3e-21
Identities = 124/150 (82%), Gaps = 10/150 (6%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||||||||| | ||||| ||| ||||||||||||| |
Sbjct: 155 tactccctccgtttcataatgtaagtcattccaccatttcccacattcatattgatgcca 96
Query: 63 atgaatctaga----------ctagatttattaacatcaatataaatgtgagaaatgcta 112
||| ||||||| ||||||| |||| |||||||| |||||| ||||| |||
Sbjct: 95 atggatctagactatatctatctagattcattagtatcaatatgaatgtgggaaatacta 36
Query: 113 gaatgacttacattatgaaacggaggaagt 142
|||||||||| ||| |||||||||||||||
Sbjct: 35 gaatgacttatattgtgaaacggaggaagt 6
>RF00906;MIR1122;AL731751.4/92313-92451 4530:Oryza sativa (rice)
Length = 139
Score = 105 bits (53), Expect = 2e-22
Identities = 117/140 (83%), Gaps = 10/140 (7%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| |||||||||||||||||| || ||||| |||||| |||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcacacattcacattgatatta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||| ||||| ||||| |||||| | |||||| |||||||||||||||||||
Sbjct: 65 atg----------agattcattaatatcaatgtgaatgtgggaaatgctagaatgactta 114
Query: 123 cattatgaaacggaggaagt 142
||| |||||||||||||||
Sbjct: 115 tattgtgaaacggaggaagt 134
Score = 97.6 bits (49), Expect = 4e-20
Identities = 113/136 (83%), Gaps = 10/136 (7%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||| |||||||||||||||||| ||| ||||| |||||| |||
Sbjct: 135 tacttcctccgtttcacaatataagtcattctagcatttcccacattcacattgatatta 76
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||| | ||||| |||||| | |||||| |||||||||||||||||||
Sbjct: 75 atgaatc----------tcattaatatcaatgtgaatgtgtgaaatgctagaatgactta 26
Query: 123 cattatgaaacggagg 138
||| |||||||||||
Sbjct: 25 tattgtgaaacggagg 10
>RF00906;MIR1122;AACV01021945.1/10278-10160 39947:Oryza sativa
Japonica Group
Length = 119
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| ||||| |||||||| |||||| ||||||||||||||||||||||||||||||
Sbjct: 46 ctagattcattaatatcaatatgaatgtgggaaatgctagaatgacttacattatgaaac 105
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 106 ggaggaagt 114
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||||||||||||||||| ||| |||||||||||| |||
Sbjct: 115 tacttcctccgtttcataatgtaagtcattctagcatttcccacattcatattgatatta 56
Query: 63 atgaatctaga 73
|||||||||||
Sbjct: 55 atgaatctaga 45
Score = 73.8 bits (37), Expect = 6e-13
Identities = 37/37 (100%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcat 39
|||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcat 41
Score = 56.0 bits (28), Expect = 1e-07
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 107 atgctagaatgacttacattatgaaacggagg 138
|||||||||||||||||||| |||||||||||
Sbjct: 41 atgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01001224.1/5364-5468 39947:Oryza sativa
Japonica Group
Length = 105
Score = 105 bits (53), Expect = 2e-22
Identities = 59/61 (96%)
Strand = Plus / Minus
Query: 82 attaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaag 141
|||||||| |||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 66 attaacattaatataaatgtgagaaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 142 t 142
|
Sbjct: 6 t 6
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| || ||| ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacatttatattaatgtta 64
Query: 63 atg 65
|||
Sbjct: 65 atg 67
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcatt 40
|||||| |||||| ||||||||||||||||||||||||
Sbjct: 101 tactccttccgttccacaatgtaagtcattctagcatt 64
Score = 46.1 bits (23), Expect = 1e-04
Identities = 29/31 (93%)
Strand = Plus / Plus
Query: 106 aatgctagaatgacttacattatgaaacgga 136
||||||||||||||||||||| || ||||||
Sbjct: 64 aatgctagaatgacttacattgtggaacgga 94
>RF00906;MIR1122;AP005729.3/123154-122993 39947:Oryza sativa
Japonica Group
Length = 162
Score = 105 bits (53), Expect = 2e-22
Identities = 126/153 (82%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||| | |||||||||| ||||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttctagcattgctcatattcatatagatgtta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||||||| |||| |||||| | |||
Sbjct: 98 atgaatctagacacatatatatgtctagattcattaacatctatatgaatgtgggcaata 39
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
|||||| ||||||||||||||||||||||||||
Sbjct: 38 ctagaaagacttacattatgaaacggaggaagt 6
Score = 91.7 bits (46), Expect = 3e-18
Identities = 122/150 (81%), Gaps = 13/150 (8%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| ||||||||||| |||||||||| |||||| ||| ||| |||||||| ||||||
Sbjct: 4 ttacttcctccgtttcataatgtaagtctttctagtattgcccacattcatatagatgtt 63
Query: 62 aatgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaat 108
|||||||||||| ||||||| ||||||||| |||| ||| |||| |||
Sbjct: 64 aatgaatctagacatatatatgtgtctagattcattaacatctatatgaatatgagcaat 123
Query: 109 gctagaatgacttacattatgaaacggagg 138
||||||| | ||||||||||||||||||||
Sbjct: 124 gctagaaagtcttacattatgaaacggagg 153
>RF00906;MIR1122;AACV01020396.1/23473-23343 39947:Oryza sativa
Japonica Group
Length = 131
Score = 105 bits (53), Expect = 2e-22
Identities = 65/69 (94%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| |||||||||||||| |||||||||||||||||||||||||| ||| ||||||
Sbjct: 58 ctagattcattaacatcaatatgaatgtgagaaatgctagaatgacttatattgtgaaac 117
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 118 ggaggaagt 126
Score = 101 bits (51), Expect = 3e-21
Identities = 66/71 (92%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||| |||||||||||||||||| || ||||||||||||||||
Sbjct: 127 tacttcctccgtttcacaatataagtcattctagcatttctcacattcatattgatgtta 68
Query: 63 atgaatctaga 73
|||||||||||
Sbjct: 67 atgaatctaga 57
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattt 41
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 104 gaaatgctagaatgacttacattatgaaacggaggaagt 142
||||||||||||||||||||||| |||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagt 6
>RF00906;MIR1122;AP002092.1/128789-128929 39947:Oryza sativa
Japonica Group
Length = 141
Score = 103 bits (52), Expect = 7e-22
Identities = 120/142 (84%), Gaps = 8/142 (5%)
Strand = Plus / Plus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||| ||||||||||||||||| |||||||||||||||||| ||||| |||||||| |
Sbjct: 3 gttattccctccgtttcacaatataagtcattctagcatttctcatatagatattgatat 62
Query: 61 taatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgact 120
||||||||||| | || ||||||||| || ||||||| |||||||| |||||||
Sbjct: 63 taatgaatctaca-ta-------taacatcaacatgaatgtgaaaaatgctaaaatgact 114
Query: 121 tacattatgaaacggaggaagt 142
|| ||| |||||||||||||||
Sbjct: 115 tatattgtgaaacggaggaagt 136
Score = 89.7 bits (45), Expect = 1e-17
Identities = 114/137 (83%), Gaps = 10/137 (7%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||| ||||||||| ||||||||| || |||||| |||||||||
Sbjct: 137 tacttcctccgtttcacaatataagtcattttagcatttttcacattcatgttgatgtta 78
Query: 63 -atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||| |||||| ||||| |||||||| || |||||||||||||||||||||
Sbjct: 77 tatg---------tagattcattaatatcaatatctatatgagaaatgctagaatgactt 27
Query: 122 acattatgaaacggagg 138
| ||| |||||||||||
Sbjct: 26 atattgtgaaacggagg 10
>RF00906;MIR1122;AACV01016474.1/3638-3773 39947:Oryza sativa
Japonica Group
Length = 136
Score = 101 bits (51), Expect = 3e-21
Identities = 63/67 (94%)
Strand = Plus / Minus
Query: 8 cctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaa 67
||||||||||||||| ||||||||| ||||||||||| |||||||||||||| |||||||
Sbjct: 127 cctccgtttcacaatataagtcattttagcattttccgtattcatattgatgataatgaa 68
Query: 68 tctagac 74
|||||||
Sbjct: 67 tctagac 61
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 13 gtttcacaatgtaagtcattctagcattttccatattcatat 54
||||||||||||||||||||||||||||| || ||||||||
Sbjct: 15 gtttcacaatgtaagtcattctagcatttcccgcattcatat 56
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| |||| ||||||||| ||| | |||||||| ||||||||| ||| ||||||
Sbjct: 63 ctagattcattatcatcaatatgaatacggaaaatgctaaaatgacttatattgtgaaac 122
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 123 ggaggaagt 131
>RF00906;MIR1122;AP004566.3/127143-127010 39947:Oryza sativa
Japonica Group
Length = 134
Score = 101 bits (51), Expect = 3e-21
Identities = 116/141 (82%), Gaps = 15/141 (10%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||||||||||||||||||| |||||||||||||||||| ||| |||||||| ||
Sbjct: 4 ttactccctccgtttcacaatataagtcattctagcatttcccacattcatatctat--- 60
Query: 62 aatgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||||||| |||||||||||||| ||||||| ||||| ||||||| |||
Sbjct: 61 ------------ctagattcattaacatcaatatgaatgtgaaaaatgatagaatggctt 108
Query: 122 acattatgaaacggaggaagt 142
|||||||||||||||||||||
Sbjct: 109 acattatgaaacggaggaagt 129
Score = 93.7 bits (47), Expect = 7e-19
Identities = 65/71 (91%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||| ||||||| |||||| || ||||||||||||||||
Sbjct: 130 tacttcctccgtttcataatgtaagccattctatcatttttcacattcatattgatgtta 71
Query: 63 atgaatctaga 73
|||||||||||
Sbjct: 70 atgaatctaga 60
>RF00906;MIR1122;AP003256.3/164903-165020 39947:Oryza sativa
Japonica Group
Length = 118
Score = 99.6 bits (50), Expect = 1e-20
Identities = 62/66 (93%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| | | ||||||||||||||||
Sbjct: 114 tacttcctccgtttcacaatgtaagtcattctagcatttcctacattcatattgatgtta 55
Query: 63 atgaat 68
||||||
Sbjct: 54 atgaat 49
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 82 attaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaag 141
|||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 53 attaacatcaatatgaatgtaggaaatgctagaatgacttacattgtgaaacggaggaag 112
Query: 142 t 142
|
Sbjct: 113 t 113
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcat 52
||||||||||||||||||||||||||||||||||||||| ||| ||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacattcat 54
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 97 aatgtgagaaatgctagaatgacttacattatgaaacggagg 138
|||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 51 aatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02027852.1/19341-19475 39946:Oryza sativa
Indica Group
Length = 135
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||||||||||| |||||| || |||||||||||| ||
Sbjct: 131 tactccctccgtttcacaatgtaagtcattctatcatttttcacgttcatattgatgcta 72
Query: 63 atgaatctag 72
||||||||||
Sbjct: 71 atgaatctag 62
Score = 75.8 bits (38), Expect = 2e-13
Identities = 59/66 (89%)
Strand = Plus / Plus
Query: 73 actagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaa 132
|||||||| |||| ||||||||| || |||| ||||| |||||||||||||||| |||||
Sbjct: 61 actagattcattagcatcaatatgaacgtgaaaaatgatagaatgacttacattgtgaaa 120
Query: 133 cggagg 138
||||||
Sbjct: 121 cggagg 126
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Plus
Query: 6 tccctccgtttcacaatgtaagtcattctagcattttccatattcatat 54
||||||||||||||||| |||||||||||| ||||| || ||||||||
Sbjct: 8 tccctccgtttcacaatataagtcattctatcatttctcaaattcatat 56
>RF00906;MIR1122;AL731582.2/110020-109911 39947:Oryza sativa
Japonica Group
Length = 110
Score = 99.6 bits (50), Expect = 1e-20
Identities = 93/110 (84%), Gaps = 13/110 (11%)
Strand = Plus / Minus
Query: 25 aagtcattctagcattttccatattcatattgatgttaatgaatctaga----------- 73
||||||||||||||||| ||| |||||||||||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 51
Query: 74 --ctagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||||||| |||||||||||||| |||||||||||||||||||||||||
Sbjct: 50 atctagattcattaacatcaatatgaatgtgagaaatgctagaatgactt 1
Score = 83.8 bits (42), Expect = 6e-16
Identities = 91/110 (82%), Gaps = 13/110 (11%)
Strand = Plus / Plus
Query: 25 aagtcattctagcattttccatattcatattgatgttaatgaatctaga----------- 73
||||||||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttctcacattcatattgatgttaatgaatctagatagatatatat 60
Query: 74 --ctagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
||||||| |||||||||||||| |||||| ||||||||||||||||||
Sbjct: 61 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
>RF00906;MIR1122;AAAA02032498.1/8257-8124 39946:Oryza sativa Indica
Group
Length = 134
Score = 99.6 bits (50), Expect = 1e-20
Identities = 65/70 (92%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| ||||||||||||||| ||||||||| ||| |||||||| |||||||||||||||
Sbjct: 131 ttacttcctccgtttcacaatataagtcattttagtattttccacattcatattgatgtt 72
Query: 62 aatgaatcta 71
||||||||||
Sbjct: 71 aatgaatcta 62
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||||||||||||||||||||||||||||| | | |||||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatttttgtattttccacattcatattgatgt 62
>RF00906;MIR1122;AAAA02008053.1/17150-17309 39946:Oryza sativa
Indica Group
Length = 160
Score = 97.6 bits (49), Expect = 4e-20
Identities = 124/151 (82%), Gaps = 11/151 (7%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||| | || ||||||| |||||||| | |||||||
Sbjct: 156 tactccctccgtttcataatgtaagactttgtagcattgcttatattcatctagatgtta 97
Query: 63 atgaatctagac-----------tagatttattaacatcaatataaatgtgagaaatgct 111
|||||||||||| |||||| ||||||||| |||| |||||| | ||||||
Sbjct: 96 atgaatctagacatatgtgtgtctagattcattaacatctatatgaatgtgggcaatgct 37
Query: 112 agaatgacttacattatgaaacggaggaagt 142
|||| ||||||||||||||||||||||||||
Sbjct: 36 agaaagacttacattatgaaacggaggaagt 6
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||||| |||||||||| ||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 65 atgaatctagac 76
>RF00906;MIR1122;AAAA02006407.1/37604-37445 39946:Oryza sativa
Indica Group
Length = 160
Score = 97.6 bits (49), Expect = 4e-20
Identities = 124/151 (82%), Gaps = 11/151 (7%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||| | |||||||||| | ||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcctatattcatattgatgtta 64
Query: 63 atgaatcta-----------gactagatttattaacatcaatataaatgtgagaaatgct 111
||||||||| | ||||||| |||||||| |||| |||||| ||||||
Sbjct: 65 atgaatctaggtatatgcgtgtctagattcattaacatttatatgaatgtggacaatgct 124
Query: 112 agaatgacttacattatgaaacggaggaagt 142
|||| | ||||||||||||||||||||||||
Sbjct: 125 agaaagtcttacattatgaaacggaggaagt 155
Score = 89.7 bits (45), Expect = 1e-17
Identities = 120/147 (81%), Gaps = 11/147 (7%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||| | |||||||||| |||| |||||||| ||||||
Sbjct: 156 tacttcctccgtttcataatgtaagactttctagcattgtccacattcatataaatgtta 97
Query: 63 atgaatctaga-----------ctagatttattaacatcaatataaatgtgagaaatgct 111
||||||||||| ||||||| |||||||||||||| ||| | | ||||||
Sbjct: 96 atgaatctagacacgcatatacctagattcattaacatcaatatgaatataggcaatgct 37
Query: 112 agaatgacttacattatgaaacggagg 138
|||| | ||||||||||||||||||||
Sbjct: 36 agaaagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AP004159.3/17803-17642 39947:Oryza sativa Japonica
Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 67/73 (91%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
|||||||||||||||||||||||||| | |||||| ||| |||||||||||| ||||||
Sbjct: 159 ttactccctccgtttcacaatgtaagactttctagtattgcccatattcatatagatgtt 100
Query: 62 aatgaatctagac 74
|||||||||||||
Sbjct: 99 aatgaatctagac 87
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||| ||||||| | |||||| | | |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcaccatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 63 atgaatctagac 74
|||||| |||||
Sbjct: 65 atgaatttagac 76
>RF00906;MIR1122;DQ855268.1/1381-1542 39947:Oryza sativa Japonica
Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||| | |||||||||| ||||||| ||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgtccatatacatatagatgtta 99
Query: 63 atgaatcta 71
|||||||||
Sbjct: 98 atgaatcta 90
Score = 73.8 bits (37), Expect = 6e-13
Identities = 64/73 (87%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| |||||||||||||||||||| | |||||||||| ||| |||||| | | ||||
Sbjct: 4 ttacttcctccgtttcacaatgtaagactttctagcattacccacattcatttagttgtt 63
Query: 62 aatgaatctagac 74
|||||||||||||
Sbjct: 64 aatgaatctagac 76
>RF00906;MIR1122;AACV01008500.1/10563-10402 39947:Oryza sativa
Japonica Group
Length = 162
Score = 97.6 bits (49), Expect = 4e-20
Identities = 122/149 (81%), Gaps = 13/149 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||| |||||| ||||||||||||| ||||||||| || ||||| | |||||||
Sbjct: 158 tactccctctgtttcataatgtaagtcattgtagcatttttcacattcacttggatgtta 99
Query: 63 atgaatctagac-------------tagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| |||||| | ||||||| |||| ||| |||||||||
Sbjct: 98 gtgaatctagacatatatacatacttagattcactaacatctatatcaatatgagaaatg 39
Query: 110 ctagaatgacttacattatgaaacggagg 138
|||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggagg 10
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||||||||||||||||| |||||| |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcatttctcatattgatatagatgtta 64
Query: 63 atgaatcta 71
||||||||
Sbjct: 65 gtgaatcta 73
>RF00906;MIR1122;AACV01023525.1/7783-7916 39947:Oryza sativa
Japonica Group
Length = 134
Score = 97.6 bits (49), Expect = 4e-20
Identities = 64/69 (92%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| ||||||||||||||| | |||| |||||||||||||||||||||| ||||||
Sbjct: 61 ctagattcattaacatcaatatatacgtgaaaaatgctagaatgacttacattgtgaaac 120
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 121 ggaggaagt 129
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| ||||||||||||||||||||||||||||||||||| || | |||||||||||
Sbjct: 131 ttacttcctccgtttcacaatgtaagtcattctagcatttttcacgtatatattgatgtt 72
Query: 62 aatgaatctaga 73
||||||||||||
Sbjct: 71 aatgaatctaga 60
>RF00906;MIR1122;AAAA02012042.1/23113-23216 39946:Oryza sativa
Indica Group
Length = 104
Score = 97.6 bits (49), Expect = 4e-20
Identities = 61/65 (93%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||| ||||||||||||||||| ||| ||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgcaagtcattctagcatttcccacattcatattgatgtta 64
Query: 63 atgaa 67
|||||
Sbjct: 65 atgaa 69
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Minus
Query: 82 attaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaag 141
|||||||||||||| |||||| |||||||||||||||||| |||| ||||||||||||||
Sbjct: 66 attaacatcaatatgaatgtgggaaatgctagaatgacttgcattgtgaaacggaggaag 7
Query: 142 t 142
|
Sbjct: 6 t 6
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattct 34
|||||||| |||||||||||| ||||||||||
Sbjct: 100 tactcccttcgtttcacaatgcaagtcattct 69
>RF00906;MIR1122;CR855219.1/67862-67748 4530:Oryza sativa (rice)
Length = 115
Score = 97.6 bits (49), Expect = 4e-20
Identities = 55/57 (96%)
Strand = Plus / Minus
Query: 86 acatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
|||||||||| |||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 62 acatcaatatgaatgtgagaaatgctagaatgacttacattgtgaaacggaggaagt 6
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||| |||||||||||||||||||||||||||||||||| || ||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttctcacattcatattgatgt 62
Score = 65.9 bits (33), Expect = 2e-10
Identities = 36/37 (97%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcat 39
|||||||||||||||||||||||||||| ||||||||
Sbjct: 111 tactccctccgtttcacaatgtaagtcaatctagcat 75
Score = 48.1 bits (24), Expect = 4e-05
Identities = 30/32 (93%)
Strand = Plus / Plus
Query: 107 atgctagaatgacttacattatgaaacggagg 138
|||||||| ||||||||||| |||||||||||
Sbjct: 75 atgctagattgacttacattgtgaaacggagg 106
>RF00906;MIR1122;AP008217.1/6615240-6615106 39947:Oryza sativa
Japonica Group
Length = 135
Score = 97.6 bits (49), Expect = 4e-20
Identities = 58/61 (95%)
Strand = Plus / Plus
Query: 82 attaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaag 141
||||||||||||||||| |||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 70 attaacatcaatataaacgtgaaaaatgctagaatgacttacattgtgaaacggaggaag 129
Query: 142 t 142
|
Sbjct: 130 t 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||||||||||||||||||||||| || || ||||||||||||
Sbjct: 131 tacttcctccgtttcacaatgtaagtcattctagcatttttcacgtttatattgatgtta 72
Query: 63 atgaat 68
||||||
Sbjct: 71 atgaat 66
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 105 aaatgctagaatgacttacattatgaaacggagg 138
|||||||| ||||||||||||| |||||||||||
Sbjct: 43 aaatgctaaaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02005623.1/56801-56936 39946:Oryza sativa
Indica Group
Length = 136
Score = 95.6 bits (48), Expect = 2e-19
Identities = 115/140 (82%), Gaps = 13/140 (9%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||||||||||||||||||||| | |||||||||| ||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagcattacctatattcatatatatgt-- 62
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||| ||||||||| |||| |||||| | |||||||||||||||||
Sbjct: 63 -----------ctagattcattaacatctatatgaatgtgtgcaatgctagaatgactta 111
Query: 123 cattatgaaacggaggaagt 142
|||||||||| |||||||||
Sbjct: 112 cattatgaaatggaggaagt 131
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||| ||||| ||||||||||||||||||||| || |||||||| |||||||
Sbjct: 132 tacttcctccatttcataatgtaagtcattctagcattgcacacattcatatagatgtta 73
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 72 atgaatctagac 61
>RF00906;MIR1122;AACV01010533.1/25208-25336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgat 58
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgat 58
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 70
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 88 atcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
|||||||| |||||| |||||||||||| ||||||||| |||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagg 10
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 88 atcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
|||||||| |||||| |||||||||||| ||||||||| |||||||||||
Sbjct: 70 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagg 120
>RF00906;MIR1122;AAAA02032822.1/7151-7018 39946:Oryza sativa Indica
Group
Length = 134
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| ||||||||||||||||||||||||| ||||||||| || | ||||||||||||
Sbjct: 131 ttacttcctccgtttcacaatgtaagtcattttagcatttttcacgtacatattgatgtt 72
Query: 62 aatgaatctaga 73
||||||||||||
Sbjct: 71 aatgaatctaga 60
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| |||||||||||||| | |||| |||||||| ||||||||||||| ||||||
Sbjct: 61 ctagattcattaacatcaatatgtacgtgaaaaatgctaaaatgacttacattgtgaaac 120
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 121 ggaggaagt 129
>RF00906;MIR1122;AP003824.3/55428-55285 39947:Oryza sativa Japonica
Group
Length = 144
Score = 95.6 bits (48), Expect = 2e-19
Identities = 66/72 (91%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||| | |||||||||| |||| |||||||| |||||||
Sbjct: 140 tactccctccgtttcacaatgtaagactttctagcattgtccacattcatatagatgtta 81
Query: 63 atgaatctagac 74
|| |||||||||
Sbjct: 80 ataaatctagac 69
Score = 93.7 bits (47), Expect = 7e-19
Identities = 115/136 (84%), Gaps = 5/136 (3%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||| | || ||||||| ||||||||||||| |||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttagcattatccatattcatatagatgt-- 62
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||| | | ||||||||||||||||| |||| |||||| |||||||||| | ||||
Sbjct: 63 atgtgt---gtctagatttattaacatctatatgaatgtggacaatgctagaaagtctta 119
Query: 123 cattatgaaacggagg 138
|||| |||||||||||
Sbjct: 120 cattgtgaaacggagg 135
>RF00906;MIR1122;AL606444.3/32464-32336 39947:Oryza sativa
Japonica Group
Length = 129
Score = 95.6 bits (48), Expect = 2e-19
Identities = 54/56 (96%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgat 58
|||||||||||||||||||||||||| |||||||||||||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagttattctagcattttccacattcatattgat 60
Score = 89.7 bits (45), Expect = 1e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgat 58
|||||||||||||||||||||||||| |||||||||||| ||| ||||||||||||
Sbjct: 125 tactccctccgtttcacaatgtaagttattctagcatttnccacattcatattgat 70
Score = 63.9 bits (32), Expect = 6e-10
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 88 atcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
|||||||| |||||| |||||||||||| ||||||||| |||||||||||
Sbjct: 70 atcaatatgaatgtggnaaatgctagaataacttacattgtgaaacggagg 120
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Minus
Query: 88 atcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
|||||||| |||||| |||||||||||| ||||||||| |||||||||||
Sbjct: 60 atcaatatgaatgtggaaaatgctagaataacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02036761.1/3716-3577 39946:Oryza sativa Indica
Group
Length = 140
Score = 95.6 bits (48), Expect = 2e-19
Identities = 120/141 (85%), Gaps = 11/141 (7%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||||||||||| ||| |||||| ||||| ||| |||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctaatattgcccatatgcatatagatatta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgaga-aatgctagaatgactt 121
|||||||||||| |||| ||| |||| ||||| ||| ||||||||||||||||
Sbjct: 65 atgaatctagac-----ttat----atctatatgaatgt-agacaatgctagaatgactt 114
Query: 122 acattatgaaacggaggaagt 142
|||||||||||||||||||||
Sbjct: 115 acattatgaaacggaggaagt 135
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 54
|||| ||||||||||| ||||||||||||||||||||| || | ||||||||
Sbjct: 136 tacttcctccgtttcataatgtaagtcattctagcattgtctacattcatat 85
Score = 56.0 bits (28), Expect = 1e-07
Identities = 28/28 (100%)
Strand = Plus / Minus
Query: 111 tagaatgacttacattatgaaacggagg 138
||||||||||||||||||||||||||||
Sbjct: 37 tagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02022635.1/21983-21840 39946:Oryza sativa
Indica Group
Length = 144
Score = 95.6 bits (48), Expect = 2e-19
Identities = 117/140 (83%), Gaps = 5/140 (3%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||| | |||||||||| ||| |||||||| |||||||
Sbjct: 140 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 81
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
||||||||| || ||||||||| |||| ||||| | |||||||||| | ||||
Sbjct: 80 atgaatctatac-----acattaacatctatatgaatgtaggcaatgctagaaagtctta 26
Query: 123 cattatgaaacggaggaagt 142
|||||||||||||| |||||
Sbjct: 25 cattatgaaacggaagaagt 6
Score = 79.8 bits (40), Expect = 1e-14
Identities = 108/129 (83%), Gaps = 5/129 (3%)
Strand = Plus / Plus
Query: 10 tccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatc 69
||||||||| |||||||| | |||||||||| | | |||||||| |||||||||| |
Sbjct: 12 tccgtttcataatgtaagactttctagcattgcctacattcatatagatgttaatg--tg 69
Query: 70 tagactagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatg 129
|| |||||| ||||||||| |||| |||||| | |||||||||| | |||||||||||
Sbjct: 70 ta---tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttacattatg 126
Query: 130 aaacggagg 138
|||||||||
Sbjct: 127 aaacggagg 135
>RF00906;MIR1122;AAAA02008121.1/20552-20439 39946:Oryza sativa
Indica Group
Length = 114
Score = 93.7 bits (47), Expect = 7e-19
Identities = 59/63 (93%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| ||||||||||||||||||||||||| ||| |||||||| |||||||||||||||
Sbjct: 4 ttacttcctccgtttcacaatgtaagtcattttagtattttccacattcatattgatgtt 63
Query: 62 aat 64
|||
Sbjct: 64 aat 66
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Minus
Query: 78 atttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggag 137
|||||||||||||||||| |||||| |||| ||| ||||||||||||| ||||||||||
Sbjct: 70 atttattaacatcaatatgaatgtggaaaatactaaaatgacttacattgtgaaacggag 11
Query: 138 gaagt 142
|||||
Sbjct: 10 gaagt 6
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcatt 32
||||||||||||||||||||||||| ||||
Sbjct: 110 tactccctccgtttcacaatgtaagccatt 81
>RF00906;MIR1122;AACV01014011.1/24546-24675 39947:Oryza sativa
Japonica Group
Length = 130
Score = 91.7 bits (46), Expect = 3e-18
Identities = 61/66 (92%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| | | |||||||||||| |||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcatttccaacattcatattgatatta 67
Query: 63 atgaat 68
||||||
Sbjct: 66 atgaat 61
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 82 attaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaag 141
||||| |||||||| ||||| ||||||||||||||||||||||| ||||||||||||||
Sbjct: 65 attaatatcaatatgaatgttggaaatgctagaatgacttacattgtgaaacggaggaag 124
Query: 142 t 142
|
Sbjct: 125 t 125
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 54
||||||||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatat 56
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 104 gaaatgctagaatgacttacattatgaaacggagg 138
||||||||||||||||||||||| |||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AC137608.2/32926-33041 39947:Oryza sativa
Japonica Group
Length = 116
Score = 91.7 bits (46), Expect = 3e-18
Identities = 62/66 (93%), Gaps = 1/66 (1%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||||||||||||||||||||||| || || |||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcatttt-cacatccatattgatgtta 63
Query: 63 atgaat 68
||||||
Sbjct: 64 atgaat 69
Score = 81.8 bits (41), Expect = 3e-15
Identities = 57/61 (93%), Gaps = 1/61 (1%)
Strand = Plus / Minus
Query: 82 attaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaag 141
|||||||||||||| |||||| |||||||||||||||||||||| ||||||||||||||
Sbjct: 65 attaacatcaatatggatgtga-aaatgctagaatgacttacattgtgaaacggaggaag 7
Query: 142 t 142
|
Sbjct: 6 t 6
Score = 73.8 bits (37), Expect = 6e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 7 ccctccgtttcacaatgtaagtcattctagcattttc 43
|||||||||||||||||||||||||||||||||||||
Sbjct: 108 ccctccgtttcacaatgtaagtcattctagcattttc 72
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 105 aaatgctagaatgacttacattatgaaacggagg 138
|||||||||||||||||||||| |||||||||||
Sbjct: 74 aaatgctagaatgacttacattgtgaaacggagg 107
>RF00906;MIR1122;AACV01009613.1/23372-23263 39947:Oryza sativa
Japonica Group
Length = 110
Score = 91.7 bits (46), Expect = 3e-18
Identities = 92/110 (83%), Gaps = 13/110 (11%)
Strand = Plus / Plus
Query: 25 aagtcattctagcattttccatattcatattgatgttaatgaatctagac---------- 74
||||||||||||||||| ||| ||||||||||||||||||||||||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgaatctagacatatatatct 60
Query: 75 ---tagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
|||||| |||||||||||||| |||||| ||||||||||||||||||
Sbjct: 61 atttagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 110
Score = 83.8 bits (42), Expect = 6e-16
Identities = 91/110 (82%), Gaps = 13/110 (11%)
Strand = Plus / Minus
Query: 25 aagtcattctagcattttccatattcatattgatgttaatgaatcta------------- 71
||||||||||||||||| ||| |||||||||||||||||||||||||
Sbjct: 110 aagtcattctagcatttcccacattcatattgatgttaatgaatctaaatagatatatat 51
Query: 72 gactagatttattaacatcaatataaatgtgagaaatgctagaatgactt 121
| ||||||| |||||||||||||| |||||| ||||||||||||||||||
Sbjct: 50 gtctagattcattaacatcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AAAA02031701.1/6482-6608 39946:Oryza sativa
Indica Group
Length = 127
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| ||||||||||| ||||||||||||| ||||| |||||| |||||||||||||||
Sbjct: 4 ttacttcctccgtttcataatgtaagtcattttagcactttccacattcatattgatgtt 63
Query: 62 aatga 66
|||||
Sbjct: 64 aatga 68
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Minus
Query: 82 attaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaag 141
|||||||||||||| |||||| || ||||| ||||||||||||||||||||||||||||
Sbjct: 66 attaacatcaatatgaatgtggaaagtgctaaaatgacttacattatgaaacggaggaag 7
Query: 142 t 142
|
Sbjct: 6 t 6
Score = 79.8 bits (40), Expect = 1e-14
Identities = 52/56 (92%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgat 58
||||||||| |||||||||||||||||||||||||| || ||| ||||||||||||
Sbjct: 123 tactccctctgtttcacaatgtaagtcattctagcacttcccacattcatattgat 68
Score = 61.9 bits (31), Expect = 2e-09
Identities = 46/51 (90%)
Strand = Plus / Plus
Query: 88 atcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
|||||||| |||||| ||| ||||||||||||||||||| |||||| ||||
Sbjct: 68 atcaatatgaatgtgggaagtgctagaatgacttacattgtgaaacagagg 118
>RF00906;MIR1122;AACV01006750.1/48875-49000 39947:Oryza sativa
Japonica Group
Length = 126
Score = 89.7 bits (45), Expect = 1e-17
Identities = 57/61 (93%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||||||||||||| |||||||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcatttctcatatttatattgatgtta 64
Query: 63 a 63
|
Sbjct: 65 a 65
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Minus
Query: 83 ttaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||||||||||| ||||||||||||| |||||||||||
Sbjct: 65 ttaacatcaatataaatatgagaaatgctaaaatgacttacattgtgaaacggagg 10
Score = 87.7 bits (44), Expect = 4e-17
Identities = 56/60 (93%)
Strand = Plus / Plus
Query: 83 ttaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
||||||||||||||||| |||||||||||| ||||||||| ||| |||||||||||||||
Sbjct: 62 ttaacatcaatataaatatgagaaatgctaaaatgacttatattgtgaaacggaggaagt 121
Score = 73.8 bits (37), Expect = 6e-13
Identities = 55/61 (90%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||| ||||||||| |||||||| |||||| ||||||||||||
Sbjct: 122 tacttcctccgtttcacaatataagtcattttagcatttctcatatttatattgatgtta 63
Query: 63 a 63
|
Sbjct: 62 a 62
>RF00906;MIR1122;ABRL01000382.1/8325-8450 65489:Oryza barthii
Length = 126
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| ||||||||| |||| |||||| | |||||||||| |||||||||||||||||
Sbjct: 74 ctagattcattaacatctatatgaatgtgggcaatgctagaaagacttacattatgaaac 15
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 14 ggaggaagt 6
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||||| |||||||||| ||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagcattgcccacattcatatagatgtta 64
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcatt 40
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 122 tactccctccgtttcataatgtaagactttctagcatt 85
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 106 aatgctagaatgacttacattatgaaacggagg 138
|||||||||| | ||||||||||||||||||||
Sbjct: 85 aatgctagaaagtcttacattatgaaacggagg 117
>RF00906;MIR1122;CR855182.1/16479-16369 4530:Oryza sativa (rice)
Length = 111
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatg 59
||||||||||||||||||||||||||||||||||||||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacgttcatattgatg 61
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 87 catcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
||||||||| || ||| ||||||||||||||||||||||| |||||||||||
Sbjct: 61 catcaatatgaacgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattt 41
|||||||||||||||| ||||||||| ||||||||||||||
Sbjct: 109 gttactccctccgttttacaatgtaaatcattctagcattt 69
Score = 48.1 bits (24), Expect = 4e-05
Identities = 36/40 (90%)
Strand = Plus / Plus
Query: 99 tgtgagaaatgctagaatgacttacattatgaaacggagg 138
|||| ||||||||||||||| ||||||| | |||||||||
Sbjct: 63 tgtgggaaatgctagaatgatttacattgtaaaacggagg 102
>RF00906;MIR1122;AACV01008986.1/10814-10653 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 121/149 (81%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||||||||||||| || |||||| ||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagccttacccatatgcatatagatgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| |||||| |||| |||| |||| |||||| | ||||
Sbjct: 65 atgaatctagatatagacatatgtttagattcattaccatctatatgaatgtgggcaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
||| |||||||||||||||||||||||||
Sbjct: 125 ctaaaatgacttacattatgaaacggagg 153
Score = 89.7 bits (45), Expect = 1e-17
Identities = 124/153 (81%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||||||||||||| ||||||| ||| |||||||| |||| ||
Sbjct: 158 tactccctccgtttcataatgtaagtcattttagcattgcccacattcatatagatggta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||| | ||||||| ||||||||| |||| || || | || |
Sbjct: 98 atgaatctaaacatatgtctatatctagattcattaacatctatatgcatatgggtaagg 39
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
|||||||||||||||||||||||||||||||||
Sbjct: 38 ctagaatgacttacattatgaaacggaggaagt 6
>RF00906;MIR1122;AC084405.6/111503-111664 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||| |||||| |||||||||||| ||||| |||||||||||||||| ||
Sbjct: 158 tactccctccgttccacaatataagtcattctaacatttctcatattcatattgatgcta 99
Query: 63 atgaatcta 71
|||||||||
Sbjct: 98 atgaatcta 90
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||| |||| | ||||||||||||| |||||||||||||||||||||| ||
Sbjct: 5 tacttcctccgttccacagtataagtcattctagtattttccatattcatattgatgcta 64
Query: 63 atgaatctaga 73
|||||| ||||
Sbjct: 65 atgaatttaga 75
>RF00906;MIR1122;AAAA02007431.1/93040-92879 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
|||||||||||||||||||||||||| | |||||| ||| ||| |||||||| ||||||
Sbjct: 159 ttactccctccgtttcacaatgtaagactttctagtattgcccacattcatatagatgtt 100
Query: 62 aatgaatctagac 74
|||||||||||||
Sbjct: 99 aatgaatctagac 87
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||| | |||||| | | |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagtactgcccatattcatatagatgtta 64
Query: 63 atgaatctagac 74
|||||| |||||
Sbjct: 65 atgaatttagac 76
>RF00906;MIR1122;AACV01014253.1/3077-3238 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 124/153 (81%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||| | ||||| |||| ||| |||||||| |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctaacattgcccacattcatatagatgcta 99
Query: 63 atgaatctagac-------------tagatttattaacatcaatataaatgtgagaaatg 109
|||||||||||| ||||||||||| |||| |||| |||||| | ||||
Sbjct: 98 atgaatctagacattattatatatatagatttattagcatctatatgaatgtgggtaatg 39
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
||| || | ||||||||||||||||||||||||
Sbjct: 38 ctataaagtcttacattatgaaacggaggaagt 6
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||| | || ||||||| ||| |||||||| |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttatagcattacccacattcatatagatgcta 64
Query: 63 atgaatcta 71
|| ||||||
Sbjct: 65 ataaatcta 73
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| |||| |||| |||| |||||| | |||| ||||| | |||||||| ||||||
Sbjct: 89 ctagattcattagcatctatatgaatgtgggcaatgttagaaagtcttacattgtgaaac 148
Query: 134 ggagg 138
|||||
Sbjct: 149 ggagg 153
>RF00906;MIR1122;AACV01027096.1/420-516 39947:Oryza sativa Japonica
Group
Length = 97
Score = 89.7 bits (45), Expect = 1e-17
Identities = 54/57 (94%)
Strand = Plus / Plus
Query: 86 acatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
||||||||||||||||||||||||||||||||||||| ||| | |||||||||||||
Sbjct: 36 acatcaatataaatgtgagaaatgctagaatgacttatattgtaaaacggaggaagt 92
Score = 63.9 bits (32), Expect = 6e-10
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||| ||||| |||||||||||||||||| || ||| |||||||||| |
Sbjct: 93 tacttcctccgttttacaatataagtcattctagcatttctcacatttatattgatgtaa 34
Query: 63 atga 66
||||
Sbjct: 33 atga 30
Score = 44.1 bits (22), Expect = 6e-04
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcatt 32
||||| |||||||||||||| |||||||||
Sbjct: 5 tactctctccgtttcacaatataagtcatt 34
>RF00906;MIR1122;AP005460.3/28792-28659 39947:Oryza sativa Japonica
Group
Length = 134
Score = 89.7 bits (45), Expect = 1e-17
Identities = 115/140 (82%), Gaps = 15/140 (10%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||||||||||||||||| ||| ||||||||| | ||
Sbjct: 130 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcatattagtacta 71
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||||||| || |||| |||||||||||||||||||| |||||
Sbjct: 70 atgaatctagac---at------------atatgaatgtgagaaatgctagaataactta 26
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagt 6
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 91 aatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
||||| |||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 78 aatatgaatgtgggaaatgctagaatgacttacattgtgaaacggaggaagt 129
>RF00906;MIR1122;AAAA02014478.1/30664-30503 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 66/73 (90%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| |||||||||||||||||||| | |||||||||| |||||||||| | ||||||
Sbjct: 4 ttacttcctccgtttcacaatgtaagactttctagcattgcccatattcatttagatgtt 63
Query: 62 aatgaatctagac 74
|||||||||||||
Sbjct: 64 aatgaatctagac 76
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||| | |||||| ||| ||| | ||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagtattgcccacgtacatatggatgtta 99
Query: 63 atgaatcta 71
|||||||||
Sbjct: 98 atgaatcta 90
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| ||||||||| | || ||| || | |||||||||| | |||||||| ||||||
Sbjct: 74 ctagattcattaacatctaaatgaatatgggcaatgctagaaagtcttacattgtgaaac 15
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 14 ggaggaagt 6
>RF00906;MIR1122;AP004774.3/34374-34243 39947:Oryza sativa Japonica
Group
Length = 132
Score = 89.7 bits (45), Expect = 1e-17
Identities = 63/69 (91%)
Strand = Plus / Minus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| |||| ||||||||||||| |||||||| ||||||||||||| ||| ||||||
Sbjct: 74 ctagattcattatcatcaatataaatatgagaaatactagaatgacttatattgtgaaac 15
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 14 ggaggaagt 6
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||| ||||||||||||| |||| |||||| ||||||||| ||
Sbjct: 5 tacttcctccgtttcacaatataagtcattctagtatttctcatatttatattgatgata 64
Query: 63 atgaatctaga 73
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattt 41
|||||||||||||||| ||||||||||||| ||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattgtagcattt 90
>RF00906;MIR1122;AAAA02007268.1/12026-11902 39946:Oryza sativa
Indica Group
Length = 125
Score = 89.7 bits (45), Expect = 1e-17
Identities = 60/65 (92%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| |||||||||||||||||| ||| ||| ||| ||||||||
Sbjct: 121 tactccctccgtttcacaatctaagtcattctagcatttcccacatttatactgatgtta 62
Query: 63 atgaa 67
|||||
Sbjct: 61 atgaa 57
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 82 attaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
|||||||||| |||||||||| ||||||||||||||||||| ||| |||||||||||
Sbjct: 60 attaacatcagtataaatgtgggaaatgctagaatgacttagattgtgaaacggagg 116
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatatt 55
|||| ||||||||||||||||||||||||| |||||||| ||| |||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattttagcatttcccacattcatatt 57
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Minus
Query: 91 aatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
||||| |||||| ||||||||| ||||||||||||| |||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatgctaaaatgacttacattgtgaaacggaggaagt 6
>RF00906;MIR1122;AAAA02015039.1/73812-73973 39946:Oryza sativa
Indica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 124/153 (81%), Gaps = 13/153 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||| | || ||||||| || |||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttttagcattcctcacattcatatagatgtta 64
Query: 63 atgaatctagac-------------tagatttattaacatcaatataaatgtgagaaatg 109
|||||||||||| |||||| ||||||||| |||| |||||| | ||||
Sbjct: 65 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 124
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
|||||| | ||||||||||||||||||||||||
Sbjct: 125 ctagaaagtcttacattatgaaacggaggaagt 157
Score = 89.7 bits (45), Expect = 1e-17
Identities = 121/149 (81%), Gaps = 13/149 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||| | |||||||||| ||| |||||||| |||||||
Sbjct: 158 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||||||| |||| |||||||| ||||
Sbjct: 98 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgaggaatg 39
Query: 110 ctagaatgacttacattatgaaacggagg 138
||| || | ||||||||||||||||||||
Sbjct: 38 ctaaaaagtcttacattatgaaacggagg 10
>RF00906;MIR1122;AACV01010647.1/16392-16231 39947:Oryza sativa
Japonica Group
Length = 162
Score = 89.7 bits (45), Expect = 1e-17
Identities = 121/149 (81%), Gaps = 13/149 (8%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||| | |||||||||| ||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||||||| |||| |||||||| ||||
Sbjct: 65 atgaatctagaaatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 124
Query: 110 ctagaatgacttacattatgaaacggagg 138
||| || | ||||||||||||||||||||
Sbjct: 125 ctaaaaagtcttacattatgaaacggagg 153
Score = 89.7 bits (45), Expect = 1e-17
Identities = 124/153 (81%), Gaps = 13/153 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||| | || ||||||| || |||||||| |||||||
Sbjct: 158 tactccctccgtttcataatgtaagactttttagcattgctcacattcatatagatgtta 99
Query: 63 atgaatctagac-------------tagatttattaacatcaatataaatgtgagaaatg 109
|||||||||||| |||||| ||||||||| |||| |||||| | ||||
Sbjct: 98 atgaatctagacacacatatatttctagattcattaacatctatatgaatgtgggcaatg 39
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
|||||| | ||||||||||||||||||||||||
Sbjct: 38 ctagaaagtcttacattatgaaacggaggaagt 6
>RF00906;MIR1122;AP005694.3/90268-90429 39947:Oryza sativa Japonica
Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||| | || ||| ||| |||| |||||||| |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 99
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 98 atgaatctagac 87
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||| |||| | |||||| ||| |||||||||||| |||||||
Sbjct: 5 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 64
Query: 63 atgaatctaga 73
||||| |||||
Sbjct: 65 atgaacctaga 75
>RF00906;MIR1122;AAAA02018733.1/10980-10861 39946:Oryza sativa
Indica Group
Length = 120
Score = 87.7 bits (44), Expect = 4e-17
Identities = 47/48 (97%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattc 50
||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgcaagtcattctagcattttccatattc 52
Score = 85.7 bits (43), Expect = 2e-16
Identities = 43/43 (100%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttcca 45
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 116 tactccctccgtttcacaatgtaagtcattctagcattttcca 74
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 105 aaatgctagaatgacttacattatgaaacggagg 138
|||||||||||||||||||||| |||||||||||
Sbjct: 78 aaatgctagaatgacttacattgtgaaacggagg 111
Score = 52.0 bits (26), Expect = 2e-06
Identities = 32/34 (94%)
Strand = Plus / Minus
Query: 105 aaatgctagaatgacttacattatgaaacggagg 138
||||||||||||||||| |||| |||||||||||
Sbjct: 43 aaatgctagaatgacttgcattgtgaaacggagg 10
>RF00906;MIR1122;AP004861.3/24137-24005 39947:Oryza sativa
Japonica Group
Length = 133
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||| | |||||||||| |||| |||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattatccacattcatttagatgtta 64
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| ||||||||| | || |||||| |||||||||| | |||||||| ||||||
Sbjct: 74 ctagattcattaacatctaaatgaatgtggataatgctagaaagtcttacattgtgaaac 15
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 14 ggaggaagt 6
>RF00906;MIR1122;AAAA02036283.1/12137-12272 39946:Oryza sativa
Indica Group
Length = 136
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||| |||||| |||||||| | |||||||||| |||| |||||||| |||||||
Sbjct: 132 tactccctctgtttcataatgtaagactttctagcattgtccacattcatatagatgtta 73
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 72 atgaatctagac 61
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| ||||||||| |||| |||||| |||||||||| | |||||||||||||||
Sbjct: 63 ctagattcattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaac 122
Query: 134 ggagg 138
||||
Sbjct: 123 agagg 127
>RF00906;MIR1122;AP008208.1/10509261-10509100 39947:Oryza sativa
Japonica Group
Length = 162
Score = 87.7 bits (44), Expect = 4e-17
Identities = 65/72 (90%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||| | || ||| ||| |||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttttaggattgtccacattcatatagatgtta 64
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||| |||| | |||||| ||| |||||||||||| |||||||
Sbjct: 158 tactccctccgtttcataatataagactttctagtattgcccatattcatatagatgtta 99
Query: 63 atgaatctaga 73
||||| |||||
Sbjct: 98 atgaacctaga 88
>RF00906;MIR1122;AACV01021025.1/26769-26650 39947:Oryza sativa
Japonica Group
Length = 120
Score = 87.7 bits (44), Expect = 4e-17
Identities = 53/56 (94%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgat 58
|||||||||||||||||||| |||||||||||||||||| ||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagcatttcccacattcatattgat 60
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 88 atcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
|||||||| |||||| ||||||||||||||||||| ||| |||||||||||
Sbjct: 60 atcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggagg 10
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 14 tttcacaatgtaagtcattctagcattttccatattcatattga 57
||||||||| |||||||||||||||||| ||| |||||||||||
Sbjct: 104 tttcacaatataagtcattctagcatttcccacattcatattga 61
Score = 61.9 bits (31), Expect = 2e-09
Identities = 50/55 (90%), Gaps = 1/55 (1%)
Strand = Plus / Plus
Query: 89 tcaatataaatgtgagaaatgctagaatgacttacattatg-aaacggaggaagt 142
||||||| |||||| ||||||||||||||||||| ||| || |||||||||||||
Sbjct: 61 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaaacggaggaagt 115
>RF00906;MIR1122;AAAA02033484.1/80878-80987 39946:Oryza sativa
Indica Group
Length = 110
Score = 85.7 bits (43), Expect = 2e-16
Identities = 64/71 (90%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||| ||||||||||||| ||||| ||||||||| |||||| |||||||| ||
Sbjct: 106 tactccctccatttcacaatgtaaatcattttagcatttttcatatttatattgatacta 47
Query: 63 atgaatctaga 73
|||||||||||
Sbjct: 46 atgaatctaga 36
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| |||| |||||||||||| ||| |||||||| ||||| ||||||| |||||
Sbjct: 37 ctagattcattagtatcaatataaatatgaaaaatgctaaaatgatttacattgtgaaat 96
Query: 134 ggagg 138
|||||
Sbjct: 97 ggagg 101
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcatt 32
|||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcatt 34
Score = 50.1 bits (25), Expect = 9e-06
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 114 aatgacttacattatgaaacggaggaagt 142
||||||||||||| |||||||||||||||
Sbjct: 34 aatgacttacattgtgaaacggaggaagt 6
>RF00906;MIR1122;AP005701.3/56841-57000 39947:Oryza sativa Japonica
Group
Length = 160
Score = 85.7 bits (43), Expect = 2e-16
Identities = 121/149 (81%), Gaps = 11/149 (7%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| ||||||||||||| ||| ||| |||| ||| ||| ||
Sbjct: 156 tactccctccgtttcacaatataagtcattctaggattgcccacattcttatagatacta 97
Query: 63 atgaatctagact-----------agatttattaacatcaatataaatgtgagaaatgct 111
|||||||||| | ||||| ||||||||| |||| |||||| | ||||||
Sbjct: 96 atgaatctagccacatatatgtccagattcattaacatctatatgaatgtgggcaatgct 37
Query: 112 agaatgacttacattatgaaacggaggaa 140
||||||||||| |||||||||||||||||
Sbjct: 36 agaatgacttatattatgaaacggaggaa 8
Score = 77.8 bits (39), Expect = 4e-14
Identities = 57/63 (90%)
Strand = Plus / Plus
Query: 8 cctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaa 67
||||||||||| ||| ||||||||||||||||| ||| |||||||| ||||||||||||
Sbjct: 10 cctccgtttcataatataagtcattctagcattgcccacattcatatagatgttaatgaa 69
Query: 68 tct 70
|||
Sbjct: 70 tct 72
>RF00906;MIR1122;AACV01024080.1/281-400 39947:Oryza sativa
Japonica Group
Length = 120
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||||||||||||||||||||||||||||| ||| ||||| || ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattatagtatttttcacattcatattgatgt 62
Score = 71.9 bits (36), Expect = 2e-12
Identities = 51/56 (91%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattga 57
||||||||||| ||||| ||||||||||||||||| ||||| || |||||||||||
Sbjct: 117 ttactccctccatttcataatgtaagtcattctagtatttttcacattcatattga 62
Score = 67.9 bits (34), Expect = 4e-11
Identities = 52/58 (89%)
Strand = Plus / Minus
Query: 81 tattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
|||| |||||||||| ||||||| |||| ||| ||||||||||||| |||||||||||
Sbjct: 67 tattgacatcaatatgaatgtgaaaaatactataatgacttacattgtgaaacggagg 10
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 89 tcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
||||||| ||||||| |||| ||||||||||||||||||||||| |||||
Sbjct: 62 tcaatatgaatgtgaaaaatactagaatgacttacattatgaaatggagg 111
>RF00906;MIR1122;AC120529.3/33430-33575 39947:Oryza sativa Japonica
Group
Length = 146
Score = 83.8 bits (42), Expect = 6e-16
Identities = 113/136 (83%), Gaps = 3/136 (2%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||| | |||||||||| ||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtta 64
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||| ||||| | | ||||| |||| |||||| | |||||||||| | ||||
Sbjct: 65 atgaatttagac---acacagacacatctatatgaatgtgggcaatgctagaaagtctta 121
Query: 123 cattatgaaacggagg 138
||||||||||||||||
Sbjct: 122 cattatgaaacggagg 137
Score = 75.8 bits (38), Expect = 2e-13
Identities = 112/136 (82%), Gaps = 3/136 (2%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||| | |||||||||| ||| |||||||| |||||
Sbjct: 142 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgtgt 83
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|| | | ||| ||| ||||||||| |||| |||||| | |||||||||| | ||||
Sbjct: 82 ctgtgtgt---ctaaattcattaacatctatatgaatgtgggcaatgctagaaagtctta 26
Query: 123 cattatgaaacggagg 138
||||||||||||||||
Sbjct: 25 cattatgaaacggagg 10
>RF00906;MIR1122;AP006757.2/120962-120855 39947:Oryza sativa
Japonica Group
Length = 108
Score = 83.8 bits (42), Expect = 6e-16
Identities = 54/58 (93%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||||||||||||||||||||||| ||||||||||||||| |||||| |||||||||
Sbjct: 104 tactccctccgtttcacaatgtaaatcattctagcatttttcatatttctattgatgt 47
Score = 65.9 bits (33), Expect = 2e-10
Identities = 48/53 (90%)
Strand = Plus / Plus
Query: 86 acatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
||||||||| |||| ||| |||||||||||||| ||||||| |||||||||||
Sbjct: 47 acatcaatagaaatatgaaaaatgctagaatgatttacattgtgaaacggagg 99
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcatttt 42
|||||||| ||||||||||| ||||||||||||| |||||
Sbjct: 5 tactcccttcgtttcacaatataagtcattctagtatttt 44
>RF00906;MIR1122;AAAA02003671.1/11725-11603 39946:Oryza sativa
Indica Group
Length = 123
Score = 83.8 bits (42), Expect = 6e-16
Identities = 48/50 (96%)
Strand = Plus / Plus
Query: 10 tccgtttcacaatgtaagtcattctagcattttccatattcatattgatg 59
||||||||||||| |||||||||||||||||| |||||||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattctagcatttcccatattcatattgatg 61
Score = 73.8 bits (37), Expect = 6e-13
Identities = 49/53 (92%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatatt 55
|||| ||||||||||||||| |||||||||||||||||| ||| |||||||||
Sbjct: 119 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatatt 67
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 91 aatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
||||| |||||| ||||||||||||||||||| ||| |||||||||||||||
Sbjct: 67 aatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagt 118
Score = 60.0 bits (30), Expect = 9e-09
Identities = 45/50 (90%)
Strand = Plus / Minus
Query: 87 catcaatataaatgtgagaaatgctagaatgacttacattatgaaacgga 136
||||||||| ||| || ||||||||||||||||||| ||| |||||||||
Sbjct: 61 catcaatatgaatatgggaaatgctagaatgacttatattgtgaaacgga 12
>RF00906;MIR1122;AC210492.2/95445-95606 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 83.8 bits (42), Expect = 6e-16
Identities = 63/70 (90%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
|||||||||||||||||||||||||| | |||||||||| || |||||||| ||||||
Sbjct: 159 ttactccctccgtttcacaatgtaagactttctagcattgcccgcattcatatagatgtt 100
Query: 62 aatgaatcta 71
||||||||||
Sbjct: 99 aatgaatcta 90
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||| | |||||||||| ||| ||||| || |||| ||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgcccacattcacatagatgcta 64
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 65 atgaatctagac 76
>RF00906;MIR1122;AAAA02029293.1/9001-8890 39946:Oryza sativa Indica
Group
Length = 112
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 82 attaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaag 141
||||| |||||||||||||||| |||| |||||||||||| |||| ||||||||||||||
Sbjct: 47 attaatatcaatataaatgtgaaaaatactagaatgacttgcattgtgaaacggaggaag 106
Query: 142 t 142
|
Sbjct: 107 t 107
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Plus
Query: 1 gttactccctccgtttcacaatgtaagtcattcta 35
|||||||||||||||||||||||||||||||||||
Sbjct: 3 gttactccctccgtttcacaatgtaagtcattcta 37
Score = 67.9 bits (34), Expect = 4e-11
Identities = 55/62 (88%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||| |||||||||||| ||||| || ||| |||||||| |||
Sbjct: 108 tacttcctccgtttcacaatgcaagtcattctagtatttttcacatttatattgatatta 49
Query: 63 at 64
||
Sbjct: 48 at 47
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Minus
Query: 111 tagaatgacttacattatgaaacggagg 138
|||||||||||||||| |||||||||||
Sbjct: 37 tagaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02029423.1/117947-118080 39946:Oryza sativa
Indica Group
Length = 134
Score = 81.8 bits (41), Expect = 3e-15
Identities = 59/65 (90%)
Strand = Plus / Plus
Query: 10 tccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatc 69
||||||||||||| ||||||||| ||||||||| |||||| | ||| |||||||||||||
Sbjct: 12 tccgtttcacaatataagtcattttagcatttttcatatttacattaatgttaatgaatc 71
Query: 70 tagac 74
|||||
Sbjct: 72 tagac 76
Score = 60.0 bits (30), Expect = 9e-09
Identities = 48/54 (88%)
Strand = Plus / Minus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 54
||||| |||||||||||||||| ||||||||| || |||||| || ||||||||
Sbjct: 132 gttaccccctccgtttcacaatataagtcattttaacatttttcacattcatat 79
>RF00906;MIR1122;AAAA02027191.1/2112-2001 39946:Oryza sativa Indica
Group
Length = 112
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Minus
Query: 6 tccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatg 65
||||||||||||| |||||||| | |||||||||| |||| |||||||| |||||||| |
Sbjct: 105 tccctccgtttcataatgtaagactttctagcattgtccacattcatatagatgttaacg 46
Query: 66 aatctagac 74
|||||||||
Sbjct: 45 aatctagac 37
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| |||||||| |||| |||||| |||||||||| | |||||||||||||||
Sbjct: 39 ctagattcgttaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaac 98
Query: 134 ggagg 138
|||||
Sbjct: 99 ggagg 103
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Minus
Query: 119 cttacattatgaaacggaggaagt 142
||||||||||||||||||||||||
Sbjct: 29 cttacattatgaaacggaggaagt 6
>RF00906;MIR1122;AP006159.3/37361-37232 39947:Oryza sativa
Japonica Group
Length = 130
Score = 81.8 bits (41), Expect = 3e-15
Identities = 56/61 (91%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||||||||||||||||||| ||||| |||||||||||| ||| ||||| |||||||||
Sbjct: 4 ttactccctccgtttcacaatataagttattctagcatttcccacattcacattgatgtt 63
Query: 62 a 62
|
Sbjct: 64 a 64
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattt 41
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 126 tacttcctccgtttcacaatgtaagtcattctagcattt 88
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 84 taacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
|||||||||| | |||||| ||||||||||||| ||||| ||| |||||||||||
Sbjct: 64 taacatcaatgtgaatgtgggaaatgctagaataacttatattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02004204.1/27138-27249 39946:Oryza sativa
Indica Group
Length = 112
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 6 tccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatg 65
||||||||||||| |||||||| | |||||||||| |||||||||||| |||||||| |
Sbjct: 8 tccctccgtttcataatgtaagactttctagcattaaccatattcatatagatgttaacg 67
Query: 66 aatctagac 74
|||||||||
Sbjct: 68 aatctagac 76
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 106 aatgctagaatgacttacattatgaaacggagg 138
|||||||||| | ||||||||||||||||||||
Sbjct: 42 aatgctagaaagtcttacattatgaaacggagg 10
Score = 48.1 bits (24), Expect = 4e-05
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 119 cttacattatgaaacggaggaagt 142
||||||||||||||||||||||||
Sbjct: 84 cttacattatgaaacggaggaagt 107
>RF00906;MIR1122;ABRL01001491.1/12562-12416 65489:Oryza barthii
Length = 147
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatg 59
|||||||||||||||||||||||||||||||||| |||| || |||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagtatttctcacattcatattgatg 61
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Minus
Query: 87 catcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
||||||||| |||||||||||| ||||||||||||||||| |||||||||||
Sbjct: 61 catcaatatgaatgtgagaaatactagaatgacttacattgtgaaacggagg 10
Score = 71.9 bits (36), Expect = 2e-12
Identities = 48/52 (92%)
Strand = Plus / Plus
Query: 87 catcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
||||||||||||||||| ||||| || |||||||||||||||||||| ||||
Sbjct: 87 catcaatataaatgtgaaaaatgttaaaatgacttacattatgaaacagagg 138
Score = 58.0 bits (29), Expect = 4e-08
Identities = 50/57 (87%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatg 59
||||||||| |||||| ||||||||||||| || |||||| || ||| |||||||||
Sbjct: 143 tactccctctgtttcataatgtaagtcattttaacatttttcacatttatattgatg 87
>RF00906;MIR1122;AAAA02004833.1/5259-5122 39946:Oryza sativa Indica
Group
Length = 138
Score = 81.8 bits (41), Expect = 3e-15
Identities = 62/69 (89%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||||||||||||| |||| |||||| | |||||||||| | |||||||| ||||||
Sbjct: 65 ctagatttattaacatctatatgaatgtgggcaatgctagaaagtcttacattgtgaaac 124
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 125 ggaggaagt 133
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||| | |||||||||| ||| |||||||| |||||||
Sbjct: 134 tacttcctccgtttcacaatgtaagactttctagcattgcccacattcatatagatgtta 75
Query: 63 atgaatctagac 74
|| |||||||||
Sbjct: 74 ataaatctagac 63
>RF00906;MIR1122;AC134931.2/49884-50026 39947:Oryza sativa Japonica
Group
Length = 143
Score = 81.8 bits (41), Expect = 3e-15
Identities = 53/57 (92%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatg 59
|||||||||| ||||| ||| |||||||||||||||||||||||||| |||||||||
Sbjct: 139 tactccctccatttcataatataagtcattctagcattttccatatttatattgatg 83
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttcca 45
|||||||||||||||| ||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcataatgtaagtcattctagtattttcca 47
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 87 catcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
||||||||||||| || |||||||||||||||||| ||||||||| |||||
Sbjct: 83 catcaatataaatatggaaaatgctagaatgacttatattatgaaatggagg 134
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 105 aaatgctagaatgacttacattatgaaacggagg 138
|||| |||||||||||||||||||||||||||||
Sbjct: 43 aaatactagaatgacttacattatgaaacggagg 10
>RF00906;MIR1122;AAAA02022147.1/7740-7901 39946:Oryza sativa Indica
Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||| | |||||||||| ||| |||||| | |||| ||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccaaattcatttagatgcta 99
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 98 atgaatctagac 87
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||| | |||||||||| ||| || ||||| ||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttctagcattgcccacatacatataaatgtta 64
Query: 63 atgaatcta 71
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01012859.1/32289-32424 39947:Oryza sativa
Japonica Group
Length = 136
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||| |||||| ||||||| ||||||||||||| ||| || ||||| |||||||
Sbjct: 132 tactccctctgtttcataatgtaaatcattctagcattgcccacatgcatatagatgtta 73
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 72 atgaatctagac 61
Score = 73.8 bits (37), Expect = 6e-13
Identities = 37/37 (100%)
Strand = Plus / Minus
Query: 106 aatgctagaatgacttacattatgaaacggaggaagt 142
|||||||||||||||||||||||||||||||||||||
Sbjct: 42 aatgctagaatgacttacattatgaaacggaggaagt 6
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| ||||||||| |||| ||||| | ||||||||||||| ||||||||||||||
Sbjct: 63 ctagattcattaacatctatatgcatgtgggcaatgctagaatgatttacattatgaaac 122
Query: 134 ggagg 138
||||
Sbjct: 123 agagg 127
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 54
|||| ||||||||||| ||||||||||||||||||||| |||||| |||||
Sbjct: 5 tacttcctccgtttcataatgtaagtcattctagcattacccatatgcatat 56
>RF00906;MIR1122;AP003298.3/138453-138292 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||| | || ||||||| |||||||||| | |||||||
Sbjct: 158 tacttcctccgtttcacaatgtaagactttttagcattgcccatattcatttagatgtta 99
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 98 atgaatctagac 87
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||| | |||||||||| ||||| ||||| || ||||
Sbjct: 5 tactccctccgtttcacaatgtaagactttctagcattgctcatatacatatagacgtta 64
Query: 63 atgaatcta 71
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AP008210.1/22180576-22180487 39947:Oryza sativa
Japonica Group
Length = 90
Score = 79.8 bits (40), Expect = 1e-14
Identities = 80/94 (85%), Gaps = 7/94 (7%)
Strand = Plus / Plus
Query: 25 aagtcattctagcattttccatattcatattgatgttaatgaatctagactagatttatt 84
||||||||||||||||| ||| ||||||||||||| ||||||||| |||| |||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgctaatgaatc-------gattcatt 53
Query: 85 aacatcaatataaatgtgagaaatgctagaatga 118
| ||||||||| |||||| |||||||||||||||
Sbjct: 54 agcatcaatatgaatgtgggaaatgctagaatga 87
Score = 79.8 bits (40), Expect = 1e-14
Identities = 80/94 (85%), Gaps = 7/94 (7%)
Strand = Plus / Minus
Query: 28 tcattctagcattttccatattcatattgatgttaatgaatctagactagatttattaac 87
|||||||||||||| ||| ||||||||||||| ||||||||| |||| |||| |
Sbjct: 87 tcattctagcatttcccacattcatattgatgctaatgaatc-------gattcattagc 35
Query: 88 atcaatataaatgtgagaaatgctagaatgactt 121
|||||||| |||||| ||||||||||||||||||
Sbjct: 34 atcaatatgaatgtgggaaatgctagaatgactt 1
>RF00906;MIR1122;AC093953.2/28747-28908 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||||||| | |||||||||| || | |||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagactttctagcattgtctacattcatatagatgtta 64
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 79.8 bits (40), Expect = 1e-14
Identities = 127/156 (81%), Gaps = 15/156 (9%)
Strand = Plus / Minus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||||||||||||||||| |||||||| | |||||| || |||| |||||||| |||||
Sbjct: 160 gttactccctccgtttcataatgtaagactttctaggtttgtccacattcatatagatgt 101
Query: 61 taatgaatcta-------------gactagatttattaacatcaatataaatgtgaga-a 106
||||||||||| | ||||||| ||||||||| |||| ||||| ||| |
Sbjct: 100 taatgaatctaaacacacatatatgtctagattcattaacatctatatgaatgt-agaca 42
Query: 107 atgctagaatgacttacattatgaaacggaggaagt 142
||||||||| | ||||||||||||||||||||||||
Sbjct: 41 atgctagaaagtcttacattatgaaacggaggaagt 6
>RF00906;MIR1122;AACV01011709.1/17498-17659 39947:Oryza sativa
Japonica Group
Length = 162
Score = 79.8 bits (40), Expect = 1e-14
Identities = 64/72 (88%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||| | | |||||||| || |||||||| |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagacttcctagcattgctcacattcatatagatgtta 64
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 73.8 bits (37), Expect = 6e-13
Identities = 119/149 (79%), Gaps = 13/149 (8%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||| | || || |||| ||| ||||| || |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttttaacattgcccacattcacatagatgtta 99
Query: 63 atgaatctaga-------------ctagatttattaacatcaatataaatgtgagaaatg 109
||||||||||| ||||||| ||||||||| |||| |||||||| ||||
Sbjct: 98 atgaatctagatatatatgtgtgtctagattcattaacatctatatgaatgtgagcaatg 39
Query: 110 ctagaatgacttacattatgaaacggagg 138
|||| | | |||||||| |||||||||||
Sbjct: 38 ctaggaagtcttacattgtgaaacggagg 10
>RF00906;MIR1122;AACV01009998.1/1442-1290 39947:Oryza sativa
Japonica Group
Length = 153
Score = 79.8 bits (40), Expect = 1e-14
Identities = 49/52 (94%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatat 54
||||||||||||||||||||||||||||||||||||||| ||| ||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcatttcccacatttatat 56
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Minus
Query: 92 atataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
||||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 56 atataaatgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattt 41
|||||||||||||||||||||||||||||||||||||||
Sbjct: 149 tactccctccgtttcacaatgtaagtcattctagcattt 111
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 93 tataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
|||||||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 99 tataaatgtgggaaatgctagaatgacttacattgtgaaacggagg 144
Score = 71.9 bits (36), Expect = 2e-12
Identities = 42/44 (95%)
Strand = Plus / Plus
Query: 92 atataaatgtgagaaatgctagaatgacttacattatgaaacgg 135
||||||||||| ||||||||||||||||||||||| ||||||||
Sbjct: 55 atataaatgtgggaaatgctagaatgacttacattgtgaaacgg 98
Score = 63.9 bits (32), Expect = 6e-10
Identities = 41/44 (93%)
Strand = Plus / Minus
Query: 11 ccgtttcacaatgtaagtcattctagcattttccatattcatat 54
||||||||||||||||||||||||||||||| ||| ||| ||||
Sbjct: 98 ccgtttcacaatgtaagtcattctagcatttcccacatttatat 55
>RF00906;MIR1122;AP008216.1/5745760-5745877 39947:Oryza sativa
Japonica Group
Length = 118
Score = 79.8 bits (40), Expect = 1e-14
Identities = 53/56 (94%), Gaps = 1/56 (1%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgat 58
|||||||||||||||||||| ||||||||||||||| |||||| ||||||||||||
Sbjct: 5 tactccctccgtttcacaatataagtcattctagca-tttccacattcatattgat 59
Score = 77.8 bits (39), Expect = 4e-14
Identities = 51/55 (92%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattga 57
|||| ||||||||||||||| |||||||||||||||||| ||| |||||||||||
Sbjct: 114 tacttcctccgtttcacaatataagtcattctagcatttcccacattcatattga 60
Score = 75.8 bits (38), Expect = 2e-13
Identities = 50/54 (92%)
Strand = Plus / Plus
Query: 89 tcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
||||||| |||||| ||||||||||||||||||| ||| |||||||||||||||
Sbjct: 60 tcaatatgaatgtgggaaatgctagaatgacttatattgtgaaacggaggaagt 113
Score = 61.9 bits (31), Expect = 2e-09
Identities = 47/51 (92%), Gaps = 1/51 (1%)
Strand = Plus / Minus
Query: 88 atcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
|||||||| |||||| ||||||||||||||||||| ||| |||||||||||
Sbjct: 59 atcaatatgaatgtg-gaaatgctagaatgacttatattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02004489.1/7901-7999 39946:Oryza sativa
Indica Group
Length = 99
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattt 41
|||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 67.9 bits (34), Expect = 4e-11
Identities = 37/38 (97%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcatt 40
|||||||||||||||||||||||| |||||||||||||
Sbjct: 95 tactccctccgtttcacaatgtaaatcattctagcatt 58
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 98 atgtgagaaatgctagaatgacttacattatgaaacggagg 138
||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 106 aatgctagaatgacttacattatgaaacggagg 138
||||||||||||| ||||||| |||||||||||
Sbjct: 58 aatgctagaatgatttacattgtgaaacggagg 90
>RF00906;MIR1122;AAAA02022087.1/9518-9625 39946:Oryza sativa
Indica Group
Length = 108
Score = 77.8 bits (39), Expect = 4e-14
Identities = 39/39 (100%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattt 41
|||||||||||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattctagcattt 43
Score = 75.8 bits (38), Expect = 2e-13
Identities = 47/50 (94%)
Strand = Plus / Minus
Query: 89 tcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
|||||||||| ||| ||||||||||||||||||||||| |||||||||||
Sbjct: 59 tcaatataaacgtgggaaatgctagaatgacttacattgtgaaacggagg 10
Score = 54.0 bits (27), Expect = 6e-07
Identities = 30/31 (96%)
Strand = Plus / Minus
Query: 10 tccgtttcacaatgtaagtcattctagcatt 40
||||||||||||| |||||||||||||||||
Sbjct: 97 tccgtttcacaatataagtcattctagcatt 67
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 106 aatgctagaatgacttacattatgaaacggaggaagt 142
||||||||||||||||| ||| ||||||||| |||||
Sbjct: 67 aatgctagaatgacttatattgtgaaacggaagaagt 103
>RF00906;MIR1122;AACV01005382.1/6871-7002 39947:Oryza sativa
Japonica Group
Length = 132
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 92 atataaatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
|||||||||||||||||| |||||||||||| ||||||||||| |||||||
Sbjct: 56 atataaatgtgagaaatgttagaatgacttatattatgaaacgaaggaagt 6
Score = 77.8 bits (39), Expect = 4e-14
Identities = 45/47 (95%)
Strand = Plus / Plus
Query: 92 atataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
||||| ||||| |||||||||||||||||||||||||||||||||||
Sbjct: 77 atatagatgtgggaaatgctagaatgacttacattatgaaacggagg 123
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattt 41
|||||||||||||||| ||||||||||||||||||||||
Sbjct: 128 tactccctccgtttcataatgtaagtcattctagcattt 90
>RF00906;MIR1122;AP008213.1/18080772-18080661 39947:Oryza sativa
Japonica Group
Length = 112
Score = 77.8 bits (39), Expect = 4e-14
Identities = 42/43 (97%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttcca 45
|||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 108 tacttcctccgtttcacaatgtaagtcattctagcattttcca 66
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattt 41
|||||||||||||||||||||||||||||| ||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcattttagcattt 43
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Plus
Query: 92 atataaatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
|||||| |||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 57 atataattgtggaaaatgctagaatgacttacattgtgaaacggaggaagt 107
Score = 54.0 bits (27), Expect = 6e-07
Identities = 33/35 (94%)
Strand = Plus / Minus
Query: 104 gaaatgctagaatgacttacattatgaaacggagg 138
||||||||| ||||||||||||| |||||||||||
Sbjct: 44 gaaatgctaaaatgacttacattgtgaaacggagg 10
>RF00906;MIR1122;AAAA02025148.1/1003-861 39946:Oryza sativa Indica
Group
Length = 143
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcata 53
|||| ||||||||||||||||||||||||||||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagtattttccacattcata 55
Score = 69.9 bits (35), Expect = 1e-11
Identities = 116/140 (82%), Gaps = 6/140 (4%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||||||| ||||||||||||| |||| | || ||||| |||||
Sbjct: 139 tacttcctccgtttcacaatataagtcattctaggatttctctcatccatataattgtta 80
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||||||||| || || |||| || ||| |||||| |||| |||||||||||||
Sbjct: 79 atgaatctagac---atataataac-tc--tatgaatgtggaaaatactagaatgactta 26
Query: 123 cattatgaaacggaggaagt 142
|||| |||||||||||||||
Sbjct: 25 cattgtgaaacggaggaagt 6
>RF00906;MIR1122;AAAA02003905.1/23139-23041 39946:Oryza sativa
Indica Group
Length = 99
Score = 77.8 bits (39), Expect = 4e-14
Identities = 48/51 (94%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcata 53
|||| |||||||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 95 tacttcctccgtttcacaatgtaagtcattctagcatttcccacattcata 45
Score = 75.8 bits (38), Expect = 2e-13
Identities = 44/46 (95%)
Strand = Plus / Plus
Query: 97 aatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
|||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 49 aatgtgggaaatgctagaatgacttacattgtgaaacggaggaagt 94
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattt 41
||||||||| |||||||||||||||||||||||||||||
Sbjct: 5 tactccctctgtttcacaatgtaagtcattctagcattt 43
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 103 agaaatgctagaatgacttacattatgaaacggagg 138
|||||||||||||||||||||||| |||||| ||||
Sbjct: 45 agaaatgctagaatgacttacattgtgaaacagagg 10
>RF00906;MIR1122;AAAA02004941.1/49677-49840 39946:Oryza sativa
Indica Group
Length = 164
Score = 75.8 bits (38), Expect = 2e-13
Identities = 62/70 (88%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
|||||||||| ||||||||||||||| | |||||||||| ||| |||||| | ||||||
Sbjct: 4 ttactccctctgtttcacaatgtaagactttctagcattacccacattcatttagatgtt 63
Query: 62 aatgaatcta 71
||||||||||
Sbjct: 64 aatgaatcta 73
Score = 56.0 bits (28), Expect = 1e-07
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcatt 40
||||||||||||||||||||||||||| | || |||||||
Sbjct: 162 gttactccctccgtttcacaatgtaagactttttagcatt 123
>RF00906;MIR1122;AL606694.3/113643-113765 39947:Oryza sativa
Japonica Group
Length = 123
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Plus
Query: 25 aagtcattctagcattttccatattcatattgatgttaatgaatctaga 73
||||||||||||||||| ||| ||||||||||||||||||| |||||||
Sbjct: 1 aagtcattctagcatttcccacattcatattgatgttaatgtatctaga 49
Score = 73.8 bits (37), Expect = 6e-13
Identities = 46/49 (93%)
Strand = Plus / Minus
Query: 25 aagtcattctagcattttccatattcatattgatgttaatgaatctaga 73
||||||||||||||||| ||| ||||||||||||||||||| |||||||
Sbjct: 123 aagtcattctagcatttcccacattcatattgatgttaatgtatctaga 75
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Minus
Query: 82 attaacatcaatataaatgtgagaaatgctagaatgactt 121
|||||||||||||| |||||| ||||||||||||||||||
Sbjct: 40 attaacatcaatatgaatgtgggaaatgctagaatgactt 1
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 82 attaacatcaatataaatgtgagaaatgctagaatgactt 121
|||||||||||||| |||||| ||||||||||||||||||
Sbjct: 84 attaacatcaatatgaatgtgggaaatgctagaatgactt 123
>RF00906;MIR1122;AP005473.4/59321-59460 39947:Oryza sativa Japonica
Group
Length = 140
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| |||| | |||||||||| ||| || ||||| |||||||
Sbjct: 136 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 77
Query: 63 atgaatcta 71
|||||||||
Sbjct: 76 atgaatcta 68
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Plus
Query: 75 tagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacg 134
|||||| ||||||||| |||| ||||| | |||||||||| | |||| ||| |||||||
Sbjct: 68 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 127
Query: 135 gagg 138
||||
Sbjct: 128 gagg 131
>RF00906;MIR1122;AP008213.1/2356452-2356313 39947:Oryza sativa
Japonica Group
Length = 140
Score = 73.8 bits (37), Expect = 6e-13
Identities = 61/69 (88%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| |||| | |||||||||| ||| || ||||| |||||||
Sbjct: 5 tactccctccgtttcacaatataagactttctagcattacccacatacatatagatgtta 64
Query: 63 atgaatcta 71
|||||||||
Sbjct: 65 atgaatcta 73
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 75 tagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacg 134
|||||| ||||||||| |||| ||||| | |||||||||| | |||| ||| |||||||
Sbjct: 73 tagattcattaacatctatatgtatgtgggtaatgctagaaagtcttatattgtgaaacg 14
Query: 135 gagg 138
||||
Sbjct: 13 gagg 10
>RF00906;MIR1122;AAAA02032856.1/3493-3654 39946:Oryza sativa Indica
Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 60/68 (88%)
Strand = Plus / Plus
Query: 75 tagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacg 134
|||||| ||||||||| |||| ||||||| |||||||||| | |||||||| |||||||
Sbjct: 90 tagattcattaacatctatatgtatgtgagcaatgctagaaagtcttacattgtgaaacg 149
Query: 135 gaggaagt 142
||||||||
Sbjct: 150 gaggaagt 157
Score = 67.9 bits (34), Expect = 4e-11
Identities = 61/70 (87%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||| |||||||||||||||||||| | |||||||||| || || ||||| ||||||
Sbjct: 159 ttacttcctccgtttcacaatgtaagactttctagcattgctcacatacatatagatgtt 100
Query: 62 aatgaatcta 71
||||||||||
Sbjct: 99 aatgaatcta 90
>RF00906;MIR1122;AAAA02005618.1/85725-85886 39946:Oryza sativa
Indica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 1 gttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||||||||||||||||| |||||||| | |||||||||| ||| |||||||| |||
Sbjct: 160 gttactccctccgtttcataatgtaagactttctagcattgcccacattcatatatatgc 101
Query: 61 taatgaatctag 72
||||||||||||
Sbjct: 100 taatgaatctag 89
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| |||| ||| |||| |||||| | |||||||||| | |||||||||||||||
Sbjct: 89 ctagattcattagcatatatatgaatgtgggcaatgctagaaagtcttacattatgaaac 148
Query: 134 ggagg 138
|||||
Sbjct: 149 ggagg 153
>RF00906;MIR1122;AL662994.3/155589-155501 39947:Oryza sativa
Japonica Group
Length = 89
Score = 71.9 bits (36), Expect = 2e-12
Identities = 45/48 (93%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattc 50
|||| ||||||||||||||||||||||||||||||| |||||| ||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcactttccacattc 52
Score = 61.9 bits (31), Expect = 2e-09
Identities = 34/35 (97%)
Strand = Plus / Minus
Query: 108 tgctagaatgacttacattatgaaacggaggaagt 142
||||||||||||||||||| |||||||||||||||
Sbjct: 40 tgctagaatgacttacattgtgaaacggaggaagt 6
>RF00906;MIR1122;AACV01011062.1/4765-4926 39947:Oryza sativa
Japonica Group
Length = 162
Score = 71.9 bits (36), Expect = 2e-12
Identities = 63/72 (87%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||| | |||||||||| ||| || ||| | |||||||
Sbjct: 158 tactccctccgtttcacaatgtaagactttctagcattgcccacatacatttagatgtta 99
Query: 63 atgaatctagac 74
|| |||||||||
Sbjct: 98 ataaatctagac 87
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||||||||||||| | || ||||| | |||||||||| | |||||||| ||||||
Sbjct: 89 ctagatttattaacatctaaatgtatgtgggcaatgctagaaagtcttacattgtgaaac 148
Query: 134 ggagg 138
|||||
Sbjct: 149 ggagg 153
Score = 44.1 bits (22), Expect = 6e-04
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 2 ttactccctccgtttcacaatgtaag 27
||||| ||||||||||||||||||||
Sbjct: 4 ttacttcctccgtttcacaatgtaag 29
>RF00906;MIR1122;AL928776.4/138726-138875 4530:Oryza sativa (rice)
Length = 150
Score = 69.9 bits (35), Expect = 1e-11
Identities = 41/43 (95%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttcca 45
|||||||||||||||| ||| ||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcataatataagtcattctagcattttcca 47
Score = 67.9 bits (34), Expect = 4e-11
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 93 tataaatgtgagaaatgctagaatgacttacattatgaaacg 134
|||||| || ||||||||||||||||||||||||||||||||
Sbjct: 96 tataaaggtaagaaatgctagaatgacttacattatgaaacg 137
Score = 61.9 bits (31), Expect = 2e-09
Identities = 49/55 (89%)
Strand = Plus / Minus
Query: 84 taacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggagg 138
||||||| |||||| ||| |||||||||||||||||| |||||||||||||||
Sbjct: 64 taacatccttataaaggtggaaaatgctagaatgacttatattatgaaacggagg 10
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattt 41
|||||||| ||||||| ||||||||||||||||||||||
Sbjct: 146 tactcccttcgtttcataatgtaagtcattctagcattt 108
Score = 44.1 bits (22), Expect = 6e-04
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 103 agaaatgctagaatgacttaca 124
||||||||||||||||||||||
Sbjct: 90 agaaatgctagaatgacttaca 69
>RF00906;MIR1122;AP008214.1/21547670-21547576 39947:Oryza sativa
Japonica Group
Length = 95
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattt 41
|||| ||||||||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctagcattt 43
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Minus
Query: 104 gaaatgctagaatgacttacattatgaaacggaggaagt 142
||||||||||||||||||||||| |||||||||||||||
Sbjct: 44 gaaatgctagaatgacttacattgtgaaacggaggaagt 6
Score = 63.9 bits (32), Expect = 6e-10
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 97 aatgtgagaaatgctagaatgacttacattatgaaacgga 136
|||||||||||||||| ||||||||| |||||||||||||
Sbjct: 45 aatgtgagaaatgctaaaatgacttatattatgaaacgga 84
>RF00906;MIR1122;AAAA02015957.1/30234-30331 39946:Oryza sativa
Indica Group
Length = 98
Score = 69.9 bits (35), Expect = 1e-11
Identities = 35/35 (100%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagc 37
|||||||||||||||||||||||||||||||||||
Sbjct: 94 tactccctccgtttcacaatgtaagtcattctagc 60
Score = 65.9 bits (33), Expect = 2e-10
Identities = 42/45 (93%)
Strand = Plus / Minus
Query: 98 atgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
||||| ||||||||||||||||||||||| || ||||||||||||
Sbjct: 50 atgtgggaaatgctagaatgacttacattgtggaacggaggaagt 6
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattt 41
|||| |||||||| |||||||||||||||||||||||||
Sbjct: 5 tacttcctccgttccacaatgtaagtcattctagcattt 43
Score = 52.0 bits (26), Expect = 2e-06
Identities = 29/30 (96%)
Strand = Plus / Plus
Query: 109 gctagaatgacttacattatgaaacggagg 138
|||||||||||||||||| |||||||||||
Sbjct: 60 gctagaatgacttacattgtgaaacggagg 89
>RF00906;MIR1122;AACV01014389.1/11060-11177 39947:Oryza sativa
Japonica Group
Length = 118
Score = 69.9 bits (35), Expect = 1e-11
Identities = 47/51 (92%)
Strand = Plus / Minus
Query: 97 aatgtgagaaatgctagaatgacttacattatgaaacggaggaagttctac 147
|||||||||||||||||||||| ||||||| ||||||||||| ||| ||||
Sbjct: 51 aatgtgagaaatgctagaatgagttacattgtgaaacggagggagtactac 1
Score = 69.9 bits (35), Expect = 1e-11
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattt 41
|||||||||||||||||||||||| ||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaactcattctagcattt 43
Score = 65.9 bits (33), Expect = 2e-10
Identities = 51/57 (89%)
Strand = Plus / Minus
Query: 12 cgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaat 68
|||| ||||||| |||||||| |||||||| ||| ||||||||||||| ||||||||
Sbjct: 105 cgttccacaatgcaagtcattttagcatttcccacattcatattgatgctaatgaat 49
>RF00906;MIR1122;AACV01003992.1/29908-29746 39947:Oryza sativa
Japonica Group
Length = 163
Score = 69.9 bits (35), Expect = 1e-11
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| | | |||| | |||||||||| ||| |||||||| |||||||
Sbjct: 159 tactccctccgtttcagattataagactttctagcattgcccacattcatatagatgtta 100
Query: 63 atgaatctaga 73
|||||||||||
Sbjct: 99 atgaatctaga 89
Score = 50.1 bits (25), Expect = 9e-06
Identities = 52/61 (85%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| | | |||| | |||||||||| ||| |||||||| |||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattacccacattcatatagatgtta 64
Query: 63 a 63
|
Sbjct: 65 a 65
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| ||||||||| |||| |||||| | |||||||||| | |||| | | ||||||
Sbjct: 90 ctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatctgaaac 149
Query: 134 ggagg 138
|||||
Sbjct: 150 ggagg 154
>RF00906;MIR1122;AACV01006898.1/39166-39311 39947:Oryza sativa
Japonica Group
Length = 146
Score = 67.9 bits (34), Expect = 4e-11
Identities = 111/136 (81%), Gaps = 3/136 (2%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| ||||||| | || ||||||| ||| |||||||| |||||||
Sbjct: 142 tactccctccgtttcataatgtaaaactttttagcattgcccacattcatatagatgtta 83
Query: 63 atgaatctagactagatttattaacatcaatataaatgtgagaaatgctagaatgactta 122
|||||| ||||| | | ||||| |||| |||||| | |||||||||| | ||||
Sbjct: 82 atgaatttagac---acacagacacatctatatgaatgtgggcaatgctagaaagtctta 26
Query: 123 cattatgaaacggagg 138
||||||||||||||||
Sbjct: 25 cattatgaaacggagg 10
Score = 60.0 bits (30), Expect = 9e-09
Identities = 51/58 (87%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgt 60
|||||||||||||||| |||||||| | |||||||||| ||| |||||||| |||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctagcattgcccacattcatatagatgt 62
>RF00906;MIR1122;AAAA02003147.1/1613-1521 39946:Oryza sativa Indica
Group
Length = 93
Score = 67.9 bits (34), Expect = 4e-11
Identities = 46/50 (92%)
Strand = Plus / Plus
Query: 93 tataaatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
||||||||| ||||||||||||||||||||||| |||||||||| ||||
Sbjct: 39 tataaatgtaggaaatgctagaatgacttacattgtgaaacggagtaagt 88
Score = 65.9 bits (33), Expect = 2e-10
Identities = 33/33 (100%)
Strand = Plus / Minus
Query: 9 ctccgtttcacaatgtaagtcattctagcattt 41
|||||||||||||||||||||||||||||||||
Sbjct: 83 ctccgtttcacaatgtaagtcattctagcattt 51
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctag 36
|||| |||||||||||||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagtcattctag 38
Score = 58.0 bits (29), Expect = 4e-08
Identities = 32/33 (96%)
Strand = Plus / Minus
Query: 110 ctagaatgacttacattatgaaacggaggaagt 142
||||||||||||||||| |||||||||||||||
Sbjct: 38 ctagaatgacttacattgtgaaacggaggaagt 6
>RF00906;MIR1122;AP008213.1/22940331-22940471 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||| |||| ||||||| ||||| ||||| |||||||
Sbjct: 137 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 78
Query: 63 atgaat 68
||||||
Sbjct: 77 atgaat 72
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Plus
Query: 82 attaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaag 141
||||||||| |||| || |||| ||||||| |||| |||||||| ||||||||||||||
Sbjct: 76 attaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggaggaag 135
Query: 142 t 142
|
Sbjct: 136 t 136
>RF00906;MIR1122;AAAA02033815.1/24477-24365 39946:Oryza sativa
Indica Group
Length = 113
Score = 67.9 bits (34), Expect = 4e-11
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatatt 55
||||| ||||||||||||||||||||||||| ||| |||| ||| |||||||||
Sbjct: 110 ttacttcctccgtttcacaatgtaagtcattttagtatttcccacattcatatt 57
Score = 63.9 bits (32), Expect = 6e-10
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 91 aatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
||||| |||||| ||||| ||| ||||||||||||| |||||||||||||||
Sbjct: 57 aatatgaatgtgggaaatactaaaatgacttacattgtgaaacggaggaagt 108
Score = 60.0 bits (30), Expect = 9e-09
Identities = 30/30 (100%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcatt 32
||||||||||||||||||||||||||||||
Sbjct: 5 tactccctccgtttcacaatgtaagtcatt 34
>RF00906;MIR1122;AACV01016615.1/81402-81262 39947:Oryza sativa
Japonica Group
Length = 141
Score = 67.9 bits (34), Expect = 4e-11
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||| |||| ||||||| ||||| ||||| |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagacattttagcattgctcatatacatatagatgtta 64
Query: 63 atgaat 68
||||||
Sbjct: 65 atgaat 70
Score = 58.0 bits (29), Expect = 4e-08
Identities = 53/61 (86%)
Strand = Plus / Minus
Query: 82 attaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaag 141
||||||||| |||| || |||| ||||||| |||| |||||||| ||||||||||||||
Sbjct: 66 attaacatctatatgtatatgagcaatgctaaaatgtcttacattgtgaaacggaggaag 7
Query: 142 t 142
|
Sbjct: 6 t 6
>RF00906;MIR1122;AC146937.2/33799-33900 39947:Oryza sativa
Japonica Group
Length = 102
Score = 67.9 bits (34), Expect = 4e-11
Identities = 43/46 (93%)
Strand = Plus / Plus
Query: 29 cattctagcattttccatattcatattgatgttaatgaatctagac 74
||||||||||||||||| |||||||| | |||||||||||||||||
Sbjct: 1 cattctagcattttccacattcatataggtgttaatgaatctagac 46
Score = 50.1 bits (25), Expect = 9e-06
Identities = 40/45 (88%)
Strand = Plus / Minus
Query: 29 cattctagcattttccatattcatattgatgttaatgaatctaga 73
||||||| ||||| ||| |||||||| | ||||||||||||||||
Sbjct: 102 cattctaacatttcccacattcatataggtgttaatgaatctaga 58
>RF00906;MIR1122;AAAA02008612.1/21224-21346 39946:Oryza sativa
Indica Group
Length = 123
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 6 tccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatg 65
|||||||||||||||||||||| | |||||| ||| |||| ||| || | ||||||||||
Sbjct: 115 tccctccgtttcacaatgtaaggctttctagtattgtccacatttatttagatgttaatg 56
Query: 66 aatct 70
|||||
Sbjct: 55 aatct 51
Score = 61.9 bits (31), Expect = 2e-09
Identities = 40/43 (93%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttcca 45
||||||||||||||||||||||||| | |||||||||| ||||
Sbjct: 5 tactccctccgtttcacaatgtaaggctttctagcattgtcca 47
Score = 46.1 bits (23), Expect = 1e-04
Identities = 53/63 (84%)
Strand = Plus / Plus
Query: 76 agatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacgg 135
||||| ||||||||| | ||||||||| ||| |||||| | |||||||| ||||||||
Sbjct: 51 agattcattaacatctaaataaatgtggacaatactagaaagccttacattgtgaaacgg 110
Query: 136 agg 138
|||
Sbjct: 111 agg 113
>RF00906;MIR1122;AAAA02024119.1/11927-11764 39946:Oryza sativa
Indica Group
Length = 164
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| | | |||| | |||||||||| ||| |||||||| |||||||
Sbjct: 160 tactccctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 101
Query: 63 atgaatcta 71
|||||||||
Sbjct: 100 atgaatcta 92
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 75 tagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacg 134
|||||| ||||||||| |||| |||||| | |||||||||| | |||| | |||||||||
Sbjct: 73 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 14
Query: 135 gaggaagt 142
||||||||
Sbjct: 13 gaggaagt 6
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| | | |||| | |||||||||| ||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 63 atgaatcta 71
|||||||||
Sbjct: 65 atgaatcta 73
Score = 56.0 bits (28), Expect = 1e-07
Identities = 55/64 (85%)
Strand = Plus / Plus
Query: 75 tagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacg 134
|||||| ||||||||| |||| |||||| | |||||||||| | |||| | |||||||||
Sbjct: 92 tagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaacg 151
Query: 135 gagg 138
||||
Sbjct: 152 gagg 155
>RF00906;MIR1122;AACV01004244.1/6035-5902 39947:Oryza sativa
Japonica Group
Length = 134
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| ||||||||| ||| ||||||| | |||||||||| | |||||||||||||||
Sbjct: 74 ctagattcattaacatccataaaaatgtgggcaatgctagaaagtcttacattatgaaac 15
Query: 134 ggagg 138
||||
Sbjct: 14 tgagg 10
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||| |||||| |||||||| | |||||||||| ||| ||| ||| |||||||
Sbjct: 5 tactccctcagtttcataatgtaagactttctagcattgcccacatttttatggatgtta 64
Query: 63 atgaatctaga 73
|||||||||||
Sbjct: 65 atgaatctaga 75
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 92 atataaatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
|||| |||||| | |||||||||| | |||||||||||||| |||||||||
Sbjct: 79 atatgaatgtgggcaatgctagaaagtcttacattatgaaatggaggaagt 129
>RF00906;MIR1122;AACV01016547.1/15069-15198 39947:Oryza sativa
Japonica Group
Length = 130
Score = 65.9 bits (33), Expect = 2e-10
Identities = 60/69 (86%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| ||||||||| |||| |||||| | |||||||||| | |||| | ||||||||
Sbjct: 57 ctagattcattaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaac 116
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 117 ggaggaagt 125
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| | | |||| | |||||||||| ||| |||||||| |||||||
Sbjct: 126 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 67
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 66 atgaatctagac 55
>RF00906;MIR1122;AACV01015348.1/13831-13958 39947:Oryza sativa
Japonica Group
Length = 128
Score = 65.9 bits (33), Expect = 2e-10
Identities = 57/65 (87%)
Strand = Plus / Minus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||||||||||||| |||| |||||| |||||||||| | ||||||||||||||
Sbjct: 74 ctagatttattaacatctatatgaatgtggacaatgctagaaagtcttacattatgaaat 15
Query: 134 ggagg 138
|||||
Sbjct: 14 ggagg 10
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcatt 40
|||||||||||||||| |||||||| | ||||||||||
Sbjct: 124 tactccctccgtttcataatgtaagactttctagcatt 87
Score = 50.1 bits (25), Expect = 9e-06
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 106 aatgctagaatgacttacattatgaaacggagg 138
|||||||||| | ||||||||||||||||||||
Sbjct: 87 aatgctagaaagtcttacattatgaaacggagg 119
>RF00906;MIR1122;AP003216.3/11030-11122 39947:Oryza sativa
Japonica Group
Length = 93
Score = 65.9 bits (33), Expect = 2e-10
Identities = 39/41 (95%)
Strand = Plus / Minus
Query: 9 ctccgtttcacaatgtaagtcattctagcattttccatatt 49
|||||||||||||| |||||||||||||||||||| |||||
Sbjct: 83 ctccgtttcacaatataagtcattctagcattttctatatt 43
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcat 39
|||| ||||||||||||| ||||||||||||||||||
Sbjct: 5 tacttcctccgtttcacagtgtaagtcattctagcat 41
Score = 56.0 bits (28), Expect = 1e-07
Identities = 34/36 (94%)
Strand = Plus / Minus
Query: 107 atgctagaatgacttacattatgaaacggaggaagt 142
|||||||||||||||||| | |||||||||||||||
Sbjct: 41 atgctagaatgacttacactgtgaaacggaggaagt 6
Score = 52.0 bits (26), Expect = 2e-06
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 105 aaatgctagaatgacttacattatgaaacggaggaagt 142
|||||||||||||||||| ||| |||||||||| ||||
Sbjct: 51 aaatgctagaatgacttatattgtgaaacggagtaagt 88
>RF00906;MIR1122;AP008214.1/27990633-27990493 39947:Oryza sativa
Japonica Group
Length = 141
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| | | |||| | |||||||||| |||| ||||| || |||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgtccacattcacatagatgtta 64
Query: 63 atgaatctagac 74
|| |||||||||
Sbjct: 65 ataaatctagac 76
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||||||||||||| || | |||||| |||||||||| | |||| | ||||||||
Sbjct: 74 ctagatttattaacatctatgtgaatgtggacaatgctagaaagtcttataatatgaaac 15
Query: 134 ggagg 138
|||||
Sbjct: 14 ggagg 10
Score = 46.1 bits (23), Expect = 1e-04
Identities = 50/59 (84%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
|||| ||||||||||| | | |||| | |||||||||| |||| |||||||| ||||||
Sbjct: 137 tacttcctccgtttcatattataagactttctagcattgtccacattcatatagatgtt 79
>RF00906;MIR1122;ABRL01002327.1/13187-13322 65489:Oryza barthii
Length = 136
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| | | |||| | |||||||||| ||| |||||||| ||||||
Sbjct: 132 tactccctccgtttcaaattataagactttctagcattacccacattcatatatatgtta 73
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 72 atgaatctagac 61
>RF00906;MIR1122;AL663005.3/79671-79830 39947:Oryza sativa
Japonica Group
Length = 160
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/71 (87%), Gaps = 2/71 (2%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| |||||||| | ||||| |||| |||| || |||| |||||||
Sbjct: 5 tactccctccgtttcataatgtaagactttctaccattgtccacat--atatagatgtta 62
Query: 63 atgaatctaga 73
|||||||||||
Sbjct: 63 atgaatctaga 73
Score = 61.9 bits (31), Expect = 2e-09
Identities = 61/71 (85%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||| | || ||||||| |||| ||| || | ||| |||
Sbjct: 156 tacttcctccgtttcacaatgtaagactttttagcattgtccacatttatttagatatta 97
Query: 63 atgaatctaga 73
|||||||||||
Sbjct: 96 atgaatctaga 86
Score = 44.1 bits (22), Expect = 6e-04
Identities = 55/65 (84%), Gaps = 2/65 (3%)
Strand = Plus / Minus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| ||||||||| ||||| |||| |||| ||||| | |||||||||||||||
Sbjct: 72 ctagattcattaacatctatata--tgtggacaatggtagaaagtcttacattatgaaac 15
Query: 134 ggagg 138
|||||
Sbjct: 14 ggagg 10
>RF00906;MIR1122;AC108504.2/79804-79643 39947:Oryza sativa Japonica
Group
Length = 162
Score = 63.9 bits (32), Expect = 6e-10
Identities = 59/68 (86%)
Strand = Plus / Minus
Query: 75 tagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacg 134
|||||| ||||||||| | || |||||| | |||||||||| | ||| ||||||||||||
Sbjct: 73 tagattcattaacatctaaatgaatgtgggtaatgctagaaagtcttgcattatgaaacg 14
Query: 135 gaggaagt 142
||||||||
Sbjct: 13 gaggaagt 6
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| |||| ||| | |||||||||| ||| |||||| | |||||||
Sbjct: 5 tacttcctccgtttcataatgcaagactttctagcattacccacattcatttagatgtta 64
Query: 63 atgaatcta 71
|||||||||
Sbjct: 65 atgaatcta 73
>RF00906;MIR1122;AACV01014958.1/7523-7680 39947:Oryza sativa
Japonica Group
Length = 158
Score = 63.9 bits (32), Expect = 6e-10
Identities = 62/72 (86%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||| | || |||| || ||| |||||| | |||||||
Sbjct: 5 tacttcctccgtttcacaatgtaagactttgtagcgttgcccacattcatttagatgtta 64
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 65 atgaatctagac 76
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| ||||||||| | || |||||| | || |||| || | |||||||| ||||||
Sbjct: 74 ctagattcattaacatctaaatgaatgtgggcaacgctacaaagtcttacattgtgaaac 15
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 14 ggaggaagt 6
Score = 50.1 bits (25), Expect = 9e-06
Identities = 58/69 (84%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||||||| |||| | || ||||| | ||| || |||| |||||||
Sbjct: 154 tactccctccgtttcacaatataagactttttagcactacccacatacataaagatgtta 95
Query: 63 atgaatcta 71
|||||||||
Sbjct: 94 atgaatcta 86
>RF00906;MIR1122;AACV01022002.1/8629-8715 39947:Oryza sativa
Japonica Group
Length = 87
Score = 61.9 bits (31), Expect = 2e-09
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 100 gtgagaaatgctagaatgacttacattatgaaacggagg 138
||||| |||||||||| ||||||||||||||||||||||
Sbjct: 40 gtgagcaatgctagaaagacttacattatgaaacggagg 78
Score = 60.0 bits (30), Expect = 9e-09
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 109 gctagaatgacttacattatgaaacggaggaagt 142
||||||| ||||||||||||||||||||||||||
Sbjct: 39 gctagaaagacttacattatgaaacggaggaagt 6
Score = 60.0 bits (30), Expect = 9e-09
Identities = 36/38 (94%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcatt 40
|||||||||||||||| |||||||||| ||||||||||
Sbjct: 83 tactccctccgtttcataatgtaagtctttctagcatt 46
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagc 37
|||| ||||||||||| |||||||||| |||||||
Sbjct: 5 tacttcctccgtttcataatgtaagtctttctagc 39
>RF00906;MIR1122;AP008210.1/99369-99480 39947:Oryza sativa Japonica
Group
Length = 112
Score = 61.9 bits (31), Expect = 2e-09
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
|||||||||||||| |||||||||| | |||||||||| ||||||||||| ||||||
Sbjct: 108 tactccctccgttttacaatgtaagactttctagcattgctcatattcatatagatgtt 50
Score = 46.1 bits (23), Expect = 1e-04
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 106 aatgctagaatgacttacattatgaaacggaggaa 140
|||||||||| | |||||||||||||||||||||
Sbjct: 42 aatgctagaaagttttacattatgaaacggaggaa 8
>RF00906;MIR1122;AY946768.1/117-30 4530:Oryza sativa (rice)
Length = 88
Score = 60.0 bits (30), Expect = 9e-09
Identities = 70/84 (83%), Gaps = 7/84 (8%)
Strand = Plus / Plus
Query: 37 cattttccatattcatattgatgttaatgaatctaga-------ctagatttattaacat 89
||||| ||| |||||||||||||| |||||||||||| ||||||| ||| ||||
Sbjct: 5 catttcccacattcatattgatgtcaatgaatctagacatctgtctagattcattgacat 64
Query: 90 caatataaatgtgagaaatgctag 113
|||||| |||||| ||||||||||
Sbjct: 65 caatatgaatgtgggaaatgctag 88
Score = 60.0 bits (30), Expect = 9e-09
Identities = 39/42 (92%)
Strand = Plus / Minus
Query: 33 ctagcattttccatattcatattgatgttaatgaatctagac 74
||||||||| ||| |||||||||||||| |||||||||||||
Sbjct: 88 ctagcatttcccacattcatattgatgtcaatgaatctagac 47
>RF00906;MIR1122;AP005308.3/147987-147826 39947:Oryza sativa
Japonica Group
Length = 162
Score = 60.0 bits (30), Expect = 9e-09
Identities = 60/70 (85%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtt 61
||||||||||||||||| | | |||| | |||||| ||| ||||| ||||||| |||||
Sbjct: 159 ttactccctccgtttcatattataagactttctagaattgtccatcttcatatagatgtc 100
Query: 62 aatgaatcta 71
||||||||||
Sbjct: 99 aatgaatcta 90
>RF00906;MIR1122;AAAA02033622.1/8442-8581 39946:Oryza sativa Indica
Group
Length = 140
Score = 58.0 bits (29), Expect = 4e-08
Identities = 47/53 (88%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatatt 55
|||| ||||||||||||||||||||| ||| ||| |||| ||| |||||||||
Sbjct: 140 tacttcctccgtttcacaatgtaagttattgtagaatttcccacattcatatt 88
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Minus
Query: 91 aatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
||||| |||||||||||| || ||| ||||||||| |||||||||||||||
Sbjct: 57 aatatgaatgtgagaaattatacaataacttacattgtgaaacggaggaagt 6
Score = 56.0 bits (28), Expect = 1e-07
Identities = 46/52 (88%)
Strand = Plus / Plus
Query: 91 aatataaatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
||||| |||||| ||||| ||| ||| ||||||||| |||||||||||||||
Sbjct: 88 aatatgaatgtgggaaattctacaataacttacattgtgaaacggaggaagt 139
Score = 48.1 bits (24), Expect = 4e-05
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 1 gttactccctccgtttcacaatgtaagt 28
|||||| |||||||||||||||||||||
Sbjct: 3 gttacttcctccgtttcacaatgtaagt 30
>RF00906;MIR1122;AP003246.3/24505-24634 39947:Oryza sativa Japonica
Group
Length = 130
Score = 58.0 bits (29), Expect = 4e-08
Identities = 44/49 (89%)
Strand = Plus / Minus
Query: 94 ataaatgtgagaaatgctagaatgacttacattatgaaacggaggaagt 142
|||||||||| |||||||||| | |||||||||||||| |||||||||
Sbjct: 54 ataaatgtgaacaatgctagaaagtcttacattatgaaatggaggaagt 6
Score = 58.0 bits (29), Expect = 4e-08
Identities = 56/65 (86%)
Strand = Plus / Minus
Query: 10 tccgtttcacaatgtaagtcattctagcattttccatattcatattgatgttaatgaatc 69
|||||||||||||||||| | |||||||||| ||| |||||||| ||| ||||||||
Sbjct: 119 tccgtttcacaatgtaagactttctagcattgcccacattcatatggatactaatgaatt 60
Query: 70 tagac 74
|||||
Sbjct: 59 tagac 55
>RF00906;MIR1122;AAAA02001474.1/15209-15351 39946:Oryza sativa
Indica Group
Length = 143
Score = 58.0 bits (29), Expect = 4e-08
Identities = 60/69 (86%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| |||||||||||||||||||| | |||||||| || ||| |||||| | |||||||
Sbjct: 139 tacttcctccgtttcacaatgtaagactttctagca-ttgccacattcatttagatgtta 81
Query: 63 atgaatcta 71
||||||||
Sbjct: 80 ttgaatcta 72
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Plus
Query: 106 aatgctagaatgacttacattatgaaacggaggaagt 142
|||||||||| | |||||||| |||||||||||||||
Sbjct: 102 aatgctagaaagtcttacattgtgaaacggaggaagt 138
Score = 44.1 bits (22), Expect = 6e-04
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcatt 40
|||| ||||||||||||||| |||| | ||||||||||
Sbjct: 5 tacttcctccgtttcacaatctaagcctttctagcatt 42
>RF00906;MIR1122;AP004764.2/29265-29128 39947:Oryza sativa Japonica
Group
Length = 138
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Minus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| |||||||| |||| |||||| | |||||||||| | |||| | ||||||||
Sbjct: 74 ctagattcgttaacatctatatgaatgtgggcaatgctagaaagtcttataatatgaaac 15
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 14 ggaggaagt 6
Score = 52.0 bits (26), Expect = 2e-06
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| | | |||| | |||||||||| ||| |||||||| |||||||
Sbjct: 5 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgtta 64
Query: 63 atgaatctag 72
| ||||||||
Sbjct: 65 acgaatctag 74
>RF00906;MIR1122;AC223445.1/72991-73152 4538:Oryza glaberrima
(African rice)
Length = 162
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 74 ctagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaac 133
||||||| |||| |||| |||| |||||| | |||||||||| | |||| | ||||||||
Sbjct: 89 ctagattcattagcatctatatgaatgtgggcaatgctagaaagtcttataatatgaaac 148
Query: 134 ggaggaagt 142
|||||||||
Sbjct: 149 ggaggaagt 157
Score = 56.0 bits (28), Expect = 1e-07
Identities = 61/72 (84%)
Strand = Plus / Minus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||| ||||||||||| | | |||| | |||||||||| ||| |||||||| |||| ||
Sbjct: 158 tacttcctccgtttcatattataagactttctagcattgcccacattcatatagatgcta 99
Query: 63 atgaatctagac 74
||||||||||||
Sbjct: 98 atgaatctagac 87
Score = 50.1 bits (25), Expect = 9e-06
Identities = 55/65 (84%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
|||||||||||||||| | | |||| | |||||||||| ||| | |||||| |||||||
Sbjct: 5 tactccctccgtttcatattataagactttctagcattgcccacaatcatatagatgtta 64
Query: 63 atgaa 67
|||||
Sbjct: 65 atgaa 69
>RF00906;MIR1122;AP003372.2/86541-86400 39947:Oryza sativa
Japonica Group
Length = 142
Score = 58.0 bits (29), Expect = 4e-08
Identities = 59/69 (85%)
Strand = Plus / Plus
Query: 3 tactccctccgtttcacaatgtaagtcattctagcattttccatattcatattgatgtta 62
||||||||||||||||||||||||| |||||||||| ||| || | || |||||||
Sbjct: 5 tactccctccgtttcacaatgtaagattttctagcattgcccacatatacatagatgtta 64
Query: 63 atgaatcta 71
|||||||||
Sbjct: 65 atgaatcta 73
Score = 48.1 bits (24), Expect = 4e-05
Identities = 54/64 (84%)
Strand = Plus / Minus
Query: 75 tagatttattaacatcaatataaatgtgagaaatgctagaatgacttacattatgaaacg 134
|||||| ||||||||| || || ||||| | |||||||||| |||||||| |||||||
Sbjct: 73 tagattcattaacatctatgtatatgtgggcaatgctagaaaatcttacattgtgaaacg 14
Query: 135 gagg 138
||||
Sbjct: 13 gagg 10
>RF00906;MIR1122;AACV01007664.1/4730-4831 39947:Oryza sativa
Japonica Group
Length = 102
Score = 58.0 bits (29), Expect = 4e-08
Identities = 35/37 (94%)
Strand = Plus / Minus
Query: 2 ttactccctccgtttcacaatgtaagtcattctagca 38
|||||||||||||||||||||||||| | ||||||||
Sbjct: 99 ttactccctccgtttcacaatgtaagactttctagca 63
Score = 54.0 bits (27), Expect = 6e-07
Identities = 45/51 (88%)
Strand = Plus / Plus
Query: 9 ctccgtttcacaatgtaagtcattctagcattttccatattcatattgatg 59
|||||||||| |||||||| | |||||||||| |||||||||||| ||||
Sbjct: 11 ctccgtttcataatgtaagactttctagcattgcccatattcatatagatg 61
Score = 50.1 bits (25), Expect = 9e-06
Identities = 34/37 (91%)
Strand = Plus / Minus
Query: 106 aatgctagaatgacttacattatgaaacggaggaagt 142
|||||||||| | ||||||||||||||||||| ||||
Sbjct: 42 aatgctagaaagtcttacattatgaaacggagaaagt 6
