miRNEST 2.0: an integrative microRNA resource miRNEST 2.0, an integrative microRNA resource :: BLAST


>40433_gma-MIR159b:mirbase
          Length = 186

 Score =  329 bits (166), Expect = 4e-91
 Identities = 166/166 (100%)
 Strand = Plus / Plus

                                                                       
Query: 1   tggagttccctgcactccaagtctgaaaggatatgatggtaaacctctactgctagttca 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 11  tggagttccctgcactccaagtctgaaaggatatgatggtaaacctctactgctagttca 70

                                                                       
Query: 61  tggatacctctgacttcttaacaacatgcgttcgaagtcaagggtttgcatgccctggga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 71  tggatacctctgacttcttaacaacatgcgttcgaagtcaagggtttgcatgccctggga 130

                                                         
Query: 121 gatgagtttaccttgatcttttggtattggagtgaagggagctcca 166
           ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 gatgagtttaccttgatcttttggtattggagtgaagggagctcca 176




>40434_gma-MIR159c:mirbase
          Length = 185

 Score = 65.9 bits (33), Expect = 9e-12
 Identities = 36/37 (97%)
 Strand = Plus / Plus

                                                
Query: 129 taccttgatcttttggtattggagtgaagggagctcc 165
           |||||||||||||| ||||||||||||||||||||||
Sbjct: 137 taccttgatcttttagtattggagtgaagggagctcc 173




>41304_ptc-MIR159f:mirbase
          Length = 201

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                      
Query: 138 cttttggtattggagtgaagggagctc 164
           ||||| |||||||||||||||||||||
Sbjct: 165 ctttttgtattggagtgaagggagctc 191




>41303_ptc-MIR159e:mirbase
          Length = 192

 Score = 46.1 bits (23), Expect = 8e-06
 Identities = 57/67 (85%), Gaps = 1/67 (1%)
 Strand = Plus / Plus

                                                                       
Query: 100 aagggtttgcatgccctgggagatgagtttaccttgatctttt-ggtattggagtgaagg 158
           |||||| ||||||  || ||||||| | || |||||||||||| ||| |||| |||||||
Sbjct: 116 aagggtctgcatgtgctaggagatgtggttgccttgatctttttggtcttggggtgaagg 175

                  
Query: 159 gagctcc 165
           |||||||
Sbjct: 176 gagctcc 182




>41920_osa-MIR159d:mirbase
          Length = 189

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 102 gggtttgcatgccctgggagatga 125
           ||||||||||| ||||||||||||
Sbjct: 111 gggtttgcatgacctgggagatga 134




>41570_vvi-MIR159a:mirbase
          Length = 194

 Score = 40.1 bits (20), Expect = 5e-04
 Identities = 54/64 (84%), Gaps = 1/64 (1%)
 Strand = Plus / Plus

                                                                       
Query: 102 gggtttgcatgccctgggagatgagtttaccttgatcttt-tggtattggagtgaaggga 160
           |||| |||||| ||| ||||| | | || ||||||||||| |||  ||||||||||||||
Sbjct: 119 gggtgtgcatgacctcggagaagtggttgccttgatctttctggccttggagtgaaggga 178

               
Query: 161 gctc 164
           ||||
Sbjct: 179 gctc 182