miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>51307_osa-miRf12092-akr:pmrd
Length = 141
Score = 58.0 bits (29), Expect = 6e-10
Identities = 29/29 (100%)
Strand = Plus / Plus
Query: 22 cccctttagtcccggttttccaaccggga 50
|||||||||||||||||||||||||||||
Sbjct: 3 cccctttagtcccggttttccaaccggga 31
>49398_osa-miRf10183-akr:pmrd
Length = 83
Score = 52.0 bits (26), Expect = 4e-08
Identities = 29/30 (96%)
Strand = Plus / Minus
Query: 24 cctttagtcccggttttccaaccgggagta 53
||||||||||||||||| ||||||||||||
Sbjct: 83 cctttagtcccggtttttcaaccgggagta 54
>51159_osa-miRf11944-akr:pmrd
Length = 91
Score = 50.1 bits (25), Expect = 2e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 18 gtaacccctttagtcccggttttccaaccggga 50
||||||||||||||||||||| | |||||||||
Sbjct: 1 gtaacccctttagtcccggttgttcaaccggga 33
>50968_osa-miRf11753-akr:pmrd
Length = 87
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 25 ctttagtcccggttttccaaccgggagta 53
||||| |||||||||||||||||||||||
Sbjct: 1 ctttaatcccggttttccaaccgggagta 29
>49273_osa-miRf10058-akr:pmrd
Length = 96
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 22 cccctttagtcccggttttccaaccggga 50
||||||||||||||||| |||||||||||
Sbjct: 95 cccctttagtcccggttgtccaaccggga 67
>49272_osa-miRf10057-akr:pmrd
Length = 102
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 22 cccctttagtcccggttttccaaccggga 50
||||||||||||||||| |||||||||||
Sbjct: 98 cccctttagtcccggttgtccaaccggga 70
>49220_osa-miRf10005-akr:pmrd
Length = 88
Score = 50.1 bits (25), Expect = 2e-07
Identities = 28/29 (96%)
Strand = Plus / Minus
Query: 22 cccctttagtcccggttttccaaccggga 50
||||||||||||||||| |||||||||||
Sbjct: 84 cccctttagtcccggttgtccaaccggga 56
>49630_osa-miRf10415-akr:pmrd
Length = 80
Score = 46.1 bits (23), Expect = 2e-06
Identities = 23/23 (100%)
Strand = Plus / Minus
Query: 28 tagtcccggttttccaaccggga 50
|||||||||||||||||||||||
Sbjct: 72 tagtcccggttttccaaccggga 50
>49265_osa-miRf10050-akr:pmrd
Length = 85
Score = 42.1 bits (21), Expect = 4e-05
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 26 tttagtcccggttttccaaccggga 50
||||||||||||||| |||||||||
Sbjct: 85 tttagtcccggtttttcaaccggga 61
>51277_osa-miRf12062-akr:pmrd
Length = 89
Score = 40.1 bits (20), Expect = 1e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 27 ttagtcccggttttccaaccggga 50
|||||||||||| |||||||||||
Sbjct: 86 ttagtcccggttgtccaaccggga 63
