miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>45973_miR482:micropc
Length = 94
Score = 178 bits (90), Expect = 4e-46
Identities = 90/90 (100%)
Strand = Plus / Plus
Query: 1 agtggaaggatagggtaagactgcggttaagtgaggctgcttcaataattatttgctcta 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3 agtggaaggatagggtaagactgcggttaagtgaggctgcttcaataattatttgctcta 62
Query: 61 atctcaccagtcttccctactcctcccatt 90
||||||||||||||||||||||||||||||
Sbjct: 63 atctcaccagtcttccctactcctcccatt 92
>44838_miR482:micropc
Length = 94
Score = 157 bits (79), Expect = 2e-39
Identities = 85/87 (97%)
Strand = Plus / Plus
Query: 1 agtggaaggatagggtaagactgcggttaagtgaggctgcttcaataattatttgctcta 60
||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||
Sbjct: 3 agtggaaggatagggtaagactgcggttaagtgagtctgcttcaataattctttgctcta 62
Query: 61 atctcaccagtcttccctactcctccc 87
|||||||||||||||||||||||||||
Sbjct: 63 atctcaccagtcttccctactcctccc 89
>45999_miR482:micropc
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 67 ccagtcttccctactcctcccatt 90
||||||||||||||||||||||||
Sbjct: 59 ccagtcttccctactcctcccatt 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 3 tggaaggatagggtaagactgcggttaag 31
|||||||||||||||||||| |||||||
Sbjct: 1 tggaaggatagggtaagactaaggttaag 29
>45114_miR482:micropc
Length = 88
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 67 ccagtcttccctactcctcccatt 90
||||||||||||||||||||||||
Sbjct: 63 ccagtcttccctactcctcccatt 86
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 2 gtggaaggatagggtaagactgcggttaag 31
||||||||||||||||||||| |||||||
Sbjct: 4 gtggaaggatagggtaagactagggttaag 33
>45021_miR482:micropc
Length = 82
Score = 48.1 bits (24), Expect = 1e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 67 ccagtcttccctactcctcccatt 90
||||||||||||||||||||||||
Sbjct: 59 ccagtcttccctactcctcccatt 82
Score = 42.1 bits (21), Expect = 7e-05
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 3 tggaaggatagggtaagactgcggttaag 31
|||||||||||||||||||| |||||||
Sbjct: 1 tggaaggatagggtaagactagggttaag 29
>46356_miR482:micropc
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 2 gtggaaggatagggtaagactgcggttaag 31
||||||||||||||||||||| |||||||
Sbjct: 4 gtggaaggatagggtaagactaaggttaag 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 ccagtcttccctactcctcccatt 90
|||||| |||||||||||||||||
Sbjct: 63 ccagtcctccctactcctcccatt 86
>44825_miR482:micropc
Length = 88
Score = 44.1 bits (22), Expect = 2e-05
Identities = 28/30 (93%)
Strand = Plus / Plus
Query: 2 gtggaaggatagggtaagactgcggttaag 31
||||||||||||||||||||| |||||||
Sbjct: 4 gtggaaggatagggtaagactaaggttaag 33
Score = 40.1 bits (20), Expect = 3e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 67 ccagtcttccctactcctcccatt 90
|||||| |||||||||||||||||
Sbjct: 63 ccagtcctccctactcctcccatt 86
