miRNEST 2.0, an integrative microRNA resource :: BLAST
>42052_osa-MIR408:mirbase
Length = 213
Score = 319 bits (161), Expect = 4e-88
Identities = 166/168 (98%)
Strand = Plus / Plus
Query: 1 gagaggagaggagacagggatgaggcagagcatgggatggggctatcaacagatgtagat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 17 gagaggagaggagacagggatgaggcagagcatgggatggggctatcaacagatgtagat 76
Query: 61 tattccttgcacaagagatgatgatgagctgtgaatgagttctgagagatggctggtgtn 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 77 tattccttgcacaagagatgatgatgagctgtgaatgagttctgagagatggctggtgtt 136
Query: 121 gttgtcgctccctcccctgcactgcctcttccctggctcccctgcaca 168
||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 gttgttgctccctcccctgcactgcctcttccctggctcccctgcaca 184
>42464_sof-MIR408c:mirbase
Length = 286
Score = 75.8 bits (38), Expect = 9e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 10 ggagacagggatgaggcagagcatgggatggggctatcaaca 51
|||||||||||||||||||||||||||||||||| |||||||
Sbjct: 18 ggagacagggatgaggcagagcatgggatggggccatcaaca 59
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 121 gttgtcgctccctcccctgcactgcctcttccctggctcccc 162
||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 231 gttgttgcttcctcccctgcactgcctcttccctggctcccc 272
>42463_sof-MIR408b:mirbase
Length = 286
Score = 75.8 bits (38), Expect = 9e-15
Identities = 41/42 (97%)
Strand = Plus / Plus
Query: 10 ggagacagggatgaggcagagcatgggatggggctatcaaca 51
|||||||||||||||||||||||||||||||||| |||||||
Sbjct: 18 ggagacagggatgaggcagagcatgggatggggccatcaaca 59
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 121 gttgtcgctccctcccctgcactgcctcttccctggctcccc 162
||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 231 gttgttgcttcctcccctgcactgcctcttccctggctcccc 272
>42829_zma-MIR408:mirbase
Length = 191
Score = 71.9 bits (36), Expect = 1e-13
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 121 gttgtcgctccctcccctgcactgcctcttccctggctcc 160
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 136 gttgttgctccctcccctgcactgcctcttccctggctcc 175
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 10 ggagacagggatgaggcagagcatgggatggggctatcaaca 51
||||||||||||||| |||||||||||||||||| |||||||
Sbjct: 18 ggagacagggatgagacagagcatgggatggggccatcaaca 59
>42830_zma-MIR408b:mirbase
Length = 147
Score = 69.9 bits (35), Expect = 6e-13
Identities = 38/39 (97%)
Strand = Plus / Plus
Query: 121 gttgtcgctccctcccctgcactgcctcttccctggctc 159
||||| |||||||||||||||||||||||||||||||||
Sbjct: 109 gttgttgctccctcccctgcactgcctcttccctggctc 147
Score = 44.1 bits (22), Expect = 3e-05
Identities = 38/42 (90%), Gaps = 1/42 (2%)
Strand = Plus / Plus
Query: 13 gacagggatgaggcagagcatggg-atggggctatcaacaga 53
|||||||| ||||||||||||||| | ||||| |||||||||
Sbjct: 1 gacagggacgaggcagagcatgggtagggggccatcaacaga 42
>42466_sof-MIR408e:mirbase
Length = 283
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 10 ggagacagggatgaggcagagcatgggatggggctatcaaca 51
|||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 18 ggagacagggatgaggcagagcatgggatgaggccatcaaca 59
Score = 48.1 bits (24), Expect = 2e-06
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 135 ccctgcactgcctcttccctggctcccc 162
|||||||||| |||||||||||||||||
Sbjct: 242 ccctgcactgactcttccctggctcccc 269
>42465_sof-MIR408d:mirbase
Length = 215
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 10 ggagacagggatgaggcagagcatgggatggggctatcaaca 51
||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 18 ggagacagggacgaggcagagcatgggatggggccatcaaca 59
Score = 60.0 bits (30), Expect = 6e-10
Identities = 39/42 (92%)
Strand = Plus / Plus
Query: 121 gttgtcgctccctcccctgcactgcctcttccctggctcccc 162
||||| ||| || |||||||||||||||||||||||||||||
Sbjct: 160 gttgttgcttccacccctgcactgcctcttccctggctcccc 201
>42462_sof-MIR408a:mirbase
Length = 283
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 10 ggagacagggatgaggcagagcatgggatggggctatcaaca 51
|||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 18 ggagacagggatgaggcagagcatgggatgaggccatcaaca 59
Score = 67.9 bits (34), Expect = 2e-12
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 121 gttgtcgctccctcccctgcactgcctcttccctggctcccc 162
||||| ||| ||||||||||||||||||||||||||||||||
Sbjct: 228 gttgttgcttcctcccctgcactgcctcttccctggctcccc 269
>42474_ssp-MIR408d:mirbase
Length = 180
Score = 65.9 bits (33), Expect = 9e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 11 gagacagggatgaggcagagcatgggatggggctatcaaca 51
|||||||||| |||||||||||||||||||||| |||||||
Sbjct: 1 gagacagggacgaggcagagcatgggatggggccatcaaca 41
Score = 54.0 bits (27), Expect = 3e-08
Identities = 36/39 (92%)
Strand = Plus / Plus
Query: 121 gttgtcgctccctcccctgcactgcctcttccctggctc 159
||||| ||| || ||||||||||||||||||||||||||
Sbjct: 142 gttgttgcttccacccctgcactgcctcttccctggctc 180
>42473_ssp-MIR408a:mirbase
Length = 248
Score = 65.9 bits (33), Expect = 9e-12
Identities = 39/41 (95%)
Strand = Plus / Plus
Query: 11 gagacagggatgaggcagagcatgggatggggctatcaaca 51
||||||||||||||||||||||||||||| ||| |||||||
Sbjct: 1 gagacagggatgaggcagagcatgggatgaggccatcaaca 41
Score = 61.9 bits (31), Expect = 1e-10
Identities = 37/39 (94%)
Strand = Plus / Plus
Query: 121 gttgtcgctccctcccctgcactgcctcttccctggctc 159
||||| ||| |||||||||||||||||||||||||||||
Sbjct: 210 gttgttgcttcctcccctgcactgcctcttccctggctc 248
>42647_tae-MIR408:mirbase
Length = 187
Score = 61.9 bits (31), Expect = 1e-10
Identities = 41/43 (95%), Gaps = 1/43 (2%)
Strand = Plus / Plus
Query: 121 gttgtcgctccctcccctgcactgcctcttccctggctcccct 163
||||| |||||||||| ||||||||||||||||||||||||||
Sbjct: 121 gttgttgctccctccc-tgcactgcctcttccctggctcccct 162
Score = 40.1 bits (20), Expect = 5e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 8 gaggagacagggatgaggcagagcatgggatg 39
||||||||||||||| |||||||| ||||||
Sbjct: 22 gaggagacagggatggagcagagcaagggatg 53
>42600_sbi-MIR408:mirbase
Length = 205
Score = 60.0 bits (30), Expect = 6e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 14 acagggatgaggcagagcatgggatggggctatcaaca 51
||||||| |||||||||||||||||||||| |||||||
Sbjct: 1 acagggacgaggcagagcatgggatggggccatcaaca 38
Score = 60.0 bits (30), Expect = 6e-10
Identities = 36/38 (94%)
Strand = Plus / Plus
Query: 121 gttgtcgctccctcccctgcactgcctcttccctggct 158
||||| ||| ||||||||||||||||||||||||||||
Sbjct: 168 gttgttgcttcctcccctgcactgcctcttccctggct 205
>41252_csi-MIR408:mirbase
Length = 153
Score = 50.1 bits (25), Expect = 5e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 131 cctcccctgcactgcctcttccctggctc 159
|||||| ||||||||||||||||||||||
Sbjct: 114 cctcccatgcactgcctcttccctggctc 142
>40391_rco-MIR408:mirbase
Length = 92
Score = 50.1 bits (25), Expect = 5e-07
Identities = 25/25 (100%)
Strand = Plus / Plus
Query: 134 cccctgcactgcctcttccctggct 158
|||||||||||||||||||||||||
Sbjct: 64 cccctgcactgcctcttccctggct 88
>40108_ath-MIR408:mirbase
Length = 218
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 138 tgcactgcctcttccctggctccc 161
||||||||||||||||||||||||
Sbjct: 121 tgcactgcctcttccctggctccc 144
>39897_aly-MIR408:mirbase
Length = 211
Score = 48.1 bits (24), Expect = 2e-06
Identities = 24/24 (100%)
Strand = Plus / Plus
Query: 138 tgcactgcctcttccctggctccc 161
||||||||||||||||||||||||
Sbjct: 118 tgcactgcctcttccctggctccc 141
>41683_vvi-MIR408:mirbase
Length = 107
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 138 tgcactgcctcttccctggctc 159
||||||||||||||||||||||
Sbjct: 78 tgcactgcctcttccctggctc 99
>40405_ahy-MIR408:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 138 tgcactgcctcttccctggctc 159
||||||||||||||||||||||
Sbjct: 82 tgcactgcctcttccctggctc 103
>40404_ahy-MIR408:mirbase
Length = 122
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 138 tgcactgcctcttccctggctc 159
||||||||||||||||||||||
Sbjct: 82 tgcactgcctcttccctggctc 103
>39490_ppt-MIR408b:mirbase
Length = 144
Score = 44.1 bits (22), Expect = 3e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 138 tgcactgcctcttccctggctcccct 163
||||||||||||||||||||| ||||
Sbjct: 94 tgcactgcctcttccctggcttccct 119
>39428_pta-MIR408:mirbase
Length = 86
Score = 44.1 bits (22), Expect = 3e-05
Identities = 22/22 (100%)
Strand = Plus / Plus
Query: 138 tgcactgcctcttccctggctc 159
||||||||||||||||||||||
Sbjct: 65 tgcactgcctcttccctggctc 86
>41463_ptc-MIR408:mirbase
Length = 105
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 138 tgcactgcctcttccctggct 158
|||||||||||||||||||||
Sbjct: 77 tgcactgcctcttccctggct 97
>41193_aqc-MIR408:mirbase
Length = 87
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Minus
Query: 138 tgcactgcctcttccctggct 158
|||||||||||||||||||||
Sbjct: 21 tgcactgcctcttccctggct 1
Score = 40.1 bits (20), Expect = 5e-04
Identities = 23/24 (95%)
Strand = Plus / Minus
Query: 12 agacagggatgaggcagagcatgg 35
||||| ||||||||||||||||||
Sbjct: 85 agacaaggatgaggcagagcatgg 62
>39742_smo-MIR408:mirbase
Length = 109
Score = 42.1 bits (21), Expect = 1e-04
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 138 tgcactgcctcttccctggct 158
|||||||||||||||||||||
Sbjct: 77 tgcactgcctcttccctggct 97
