miRNEST 2.0, an integrative microRNA resource :: BLAST
BLASTN 2.2.20 [Feb-08-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
>42148_osa-MIR812k:mirbase
Length = 226
Score = 89.7 bits (45), Expect = 1e-18
Identities = 113/137 (82%), Gaps = 1/137 (0%)
Strand = Plus / Plus
Query: 29 tccgtctcaaaataagtgcggccataagtttccacgctcaactttgatcgtccgttctac 88
||||| ||| ||||||||| ||||| ||||||| ||||||| ||||||||||||| ||
Sbjct: 2 tccgtttcataataagtgcagccatgagtttccgcgctcaattttgatcgtccgtcttat 61
Query: 89 ttgannnnnnnn-ataattagtatttttattgttatgaaatgataaaacgtgaatagtac 147
|||| |||||||| |||||| ||||||||| |||||||||| ||||||||||
Sbjct: 62 ttgaaatttttttataattagcatttttgttgttatgagatgataaaacatgaatagtac 121
Query: 148 tttgctcgtgacttatg 164
||| || ||||||||||
Sbjct: 122 tttacttgtgacttatg 138
Score = 44.1 bits (22), Expect = 6e-05
Identities = 34/38 (89%)
Strand = Plus / Plus
Query: 206 aaagttggacatggaaaatcatggctgcacttattttg 243
|||||||||| |||||| ||||||| |||||||||||
Sbjct: 181 aaagttggacgcggaaaaccatggctacacttattttg 218
>42147_osa-MIR812j:mirbase
Length = 297
Score = 69.9 bits (35), Expect = 1e-12
Identities = 62/71 (87%)
Strand = Plus / Minus
Query: 187 ttaaataagatgaacaatcaaagttggacatggaaaatcatggctgcacttattttggga 246
|||||||||| ||||||| ||||||||||| | ||| |||||||| | ||||||||||||
Sbjct: 96 ttaaataagacgaacaattaaagttggacaagaaaactcatggctacgcttattttggga 37
Query: 247 cagagggagta 257
|| ||| ||||
Sbjct: 36 caaaggaagta 26
Score = 54.0 bits (27), Expect = 6e-08
Identities = 39/43 (90%)
Strand = Plus / Minus
Query: 104 attagtatttttattgttatgaaatgataaaacgtgaatagta 146
|||||||||||||||||||| | || ||||||| |||||||||
Sbjct: 181 attagtatttttattgttattagattataaaacatgaatagta 139
Score = 48.1 bits (24), Expect = 4e-06
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 206 aaagttggacatggaaaatcatggctgcacttattttgggacagagggagta 257
||||||||||| ||||| |||||||||| |||||||| ||| ||| |||||
Sbjct: 213 aaagttggacacggaaactcatggctgcgtttattttgtgacggagagagta 264
>42150_osa-MIR812m:mirbase
Length = 188
Score = 65.9 bits (33), Expect = 2e-11
Identities = 58/65 (89%), Gaps = 1/65 (1%)
Strand = Plus / Plus
Query: 101 ataattagtattttta-ttgttatgaaatgataaaacgtgaatagtactttgctcgtgac 159
||||||||||||||| ||||||||| || |||||| ||||||||||||| ||||||||
Sbjct: 55 ataattagtattttttgttgttatgagataataaaatatgaatagtactttactcgtgac 114
Query: 160 ttatg 164
|||||
Sbjct: 115 ttatg 119
>42152_osa-MIR812n:mirbase
Length = 203
Score = 61.9 bits (31), Expect = 2e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 104 attagtatttttattgttatgaaatgataaaacgtgaatagtacttt 150
|||||||||| ||||||||| | |||||||||| |||||||||||||
Sbjct: 66 attagtatttctattgttattagatgataaaacatgaatagtacttt 112
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 203 atcaaagttggacatggaaaatcatggctgcactta 238
||||||||||| || |||||||||||||||||||||
Sbjct: 166 atcaaagttgggcacggaaaatcatggctgcactta 201
Score = 44.1 bits (22), Expect = 6e-05
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 189 aaataagatgaacaatcaaagttggacatggaaaatcatggctgcactta 238
|||||||| |||| || |||||||| || ||||| |||||||||||||||
Sbjct: 51 aaataagacgaacgat-aaagttgggcacggaaactcatggctgcactta 3
>42151_osa-MIR812n:mirbase
Length = 203
Score = 61.9 bits (31), Expect = 2e-10
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 104 attagtatttttattgttatgaaatgataaaacgtgaatagtacttt 150
|||||||||| ||||||||| | |||||||||| |||||||||||||
Sbjct: 66 attagtatttctattgttattagatgataaaacatgaatagtacttt 112
Score = 56.0 bits (28), Expect = 1e-08
Identities = 34/36 (94%)
Strand = Plus / Plus
Query: 203 atcaaagttggacatggaaaatcatggctgcactta 238
||||||||||| || |||||||||||||||||||||
Sbjct: 166 atcaaagttgggcacggaaaatcatggctgcactta 201
Score = 44.1 bits (22), Expect = 6e-05
Identities = 44/50 (88%), Gaps = 1/50 (2%)
Strand = Plus / Minus
Query: 189 aaataagatgaacaatcaaagttggacatggaaaatcatggctgcactta 238
|||||||| |||| || |||||||| || ||||| |||||||||||||||
Sbjct: 51 aaataagacgaacgat-aaagttgggcacggaaactcatggctgcactta 3
>42144_osa-MIR812g:mirbase
Length = 242
Score = 61.9 bits (31), Expect = 2e-10
Identities = 58/66 (87%), Gaps = 2/66 (3%)
Strand = Plus / Minus
Query: 101 ataattagtatttttattgttatgaaatgataaaacgtgaatag--tactttgctcgtga 158
||||||||||||||||||||||||| || |||||| ||||||| |||||| ||| |||
Sbjct: 158 ataattagtatttttattgttatgagataataaaatatgaatagtatactttactcatga 99
Query: 159 cttatg 164
||||||
Sbjct: 98 cttatg 93
>42139_osa-MIR812b:mirbase
Length = 170
Score = 61.9 bits (31), Expect = 2e-10
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 104 attagtatttttattgttatgaaatgataaaacgtgaatagtacttt 150
|||||||||||||||||||| | |||||||||| |||||| ||||||
Sbjct: 120 attagtatttttattgttattagatgataaaacatgaatattacttt 74
>42149_osa-MIR812l:mirbase
Length = 242
Score = 54.0 bits (27), Expect = 6e-08
Identities = 54/63 (85%)
Strand = Plus / Plus
Query: 102 taattagtatttttattgttatgaaatgataaaacgtgaatagtactttgctcgtgactt 161
|||||| ||||||| ||||||| | |||||||||| || |||||| ||| | ||||||||
Sbjct: 83 taattaatatttttgttgttataagatgataaaacatgcatagtattttacgcgtgactt 142
Query: 162 atg 164
|||
Sbjct: 143 atg 145
Score = 42.1 bits (21), Expect = 2e-04
Identities = 60/73 (82%)
Strand = Plus / Plus
Query: 187 ttaaataagatgaacaatcaaagttggacatggaaaatcatggctgcacttattttggga 246
|||||||||| |||| | |||||||||| ||||||| |||| |||||||| |||||
Sbjct: 170 ttaaataagacgaacggttaaagttggacgcggaaaattatggatgcacttaaagtggga 229
Query: 247 cagagggagtatt 259
|||||||||||
Sbjct: 230 tggagggagtatt 242
>42141_osa-MIR812d:mirbase
Length = 153
Score = 54.0 bits (27), Expect = 6e-08
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 104 attagtatttttattgttatgaaatgataaaacgtgaatagtacttt 150
|||||||||||||||||| | | |||||||||| |||||| ||||||
Sbjct: 110 attagtatttttattgttcttatatgataaaacatgaataatacttt 64
>42138_osa-MIR812a:mirbase
Length = 234
Score = 54.0 bits (27), Expect = 6e-08
Identities = 39/43 (90%)
Strand = Plus / Plus
Query: 104 attagtatttttattgttatgaaatgataaaacgtgaatagta 146
|||| ||||||||||||||| | |||||||||| |||||||||
Sbjct: 82 attactatttttattgttattacatgataaaacatgaatagta 124
>42146_osa-MIR812i:mirbase
Length = 242
Score = 48.1 bits (24), Expect = 4e-06
Identities = 45/52 (86%)
Strand = Plus / Plus
Query: 206 aaagttggacatggaaaatcatggctgcacttattttgggacagagggagta 257
||||||||||| | ||| ||| |||||| |||||||||||| |||||||||
Sbjct: 186 aaagttggacacgaaaactcagggctgcgcttattttgggaatgagggagta 237
>42154_osa-MIR812o:mirbase
Length = 173
Score = 46.1 bits (23), Expect = 1e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 104 attagtatttttattgttatgaaatgataaaacgtgaatagtacttt 150
||||||||||||||| || | | |||||||||| |||||| ||||||
Sbjct: 50 attagtatttttattattgttagatgataaaacatgaataatacttt 96
>42153_osa-MIR812o:mirbase
Length = 173
Score = 46.1 bits (23), Expect = 1e-05
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 104 attagtatttttattgttatgaaatgataaaacgtgaatagtacttt 150
||||||||||||||| || | | |||||||||| |||||| ||||||
Sbjct: 50 attagtatttttattattgttagatgataaaacatgaataatacttt 96
>42145_osa-MIR812h:mirbase
Length = 187
Score = 46.1 bits (23), Expect = 1e-05
Identities = 32/35 (91%)
Strand = Plus / Plus
Query: 101 ataattagtatttttattgttatgaaatgataaaa 135
|||| |||||||||||||||||||| || ||||||
Sbjct: 79 ataaatagtatttttattgttatgagattataaaa 113
>42274_osa-MIR1862d:mirbase
Length = 150
Score = 44.1 bits (22), Expect = 6e-05
Identities = 22/22 (100%)
Strand = Plus / Minus
Query: 236 ttattttgggacagagggagta 257
||||||||||||||||||||||
Sbjct: 50 ttattttgggacagagggagta 29
>42142_osa-MIR812e:mirbase
Length = 170
Score = 40.1 bits (20), Expect = 9e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 104 attagtatttttattgttatgaaatgataaaa 135
|||| ||||||||||||||| | |||||||||
Sbjct: 48 attactatttttattgttattagatgataaaa 79
