miRNEST 2.0, an integrative microRNA resource :: BLAST
>51209_osa-miRf11994-akr:pmrd
Length = 183
Score = 131 bits (66), Expect = 3e-31
Identities = 111/127 (87%), Gaps = 1/127 (0%)
Strand = Plus / Plus
Query: 37 agtttttgcttgtaacgtttgacccactcgtcttattcaaannnnnnngaaattattaat 96
|||||||||||| ||||||||||| ||| |||||||||||| ||||||||| |
Sbjct: 5 agtttttgcttgcaacgtttgacc-acttgtcttattcaaaaacttttaaaattattatt 63
Query: 97 tattttatttgtgacttactttattatctaaaatactttaagcataacttttcatttttt 156
|||||||||||||||||||||||||||||| | ||||||||||| ||||||| |||||||
Sbjct: 64 tattttatttgtgacttactttattatctacagtactttaagcacaactttttatttttt 123
Query: 157 atatttg 163
|||||||
Sbjct: 124 atatttg 130
Score = 48.1 bits (24), Expect = 3e-06
Identities = 39/44 (88%)
Strand = Plus / Minus
Query: 173 tttgaataagactagtggtcaaacgttacatgtaaaaaatcaaa 216
|||||||||||| |||||||||||||| || | ||||| |||||
Sbjct: 44 tttgaataagacaagtggtcaaacgttgcaagcaaaaactcaaa 1
Score = 48.1 bits (24), Expect = 3e-06
Identities = 37/40 (92%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 37 agtttttgcttgtaacgtttgacccactcgtcttattcaa 76
|||||||||||| || |||||||| |||||||||||||||
Sbjct: 179 agtttttgcttgcaatgtttgacc-actcgtcttattcaa 141
>49422_osa-miRf10207-akr:pmrd
Length = 165
Score = 89.7 bits (45), Expect = 9e-19
Identities = 89/105 (84%), Gaps = 2/105 (1%)
Strand = Plus / Minus
Query: 60 ccactcgtcttattcaaannnnnnngaaattattaattattttatttgtgacttacttta 119
|||||||||||||||||| |||||||||| ||||||| |||| ||||||||||
Sbjct: 147 ccactcgtcttattcaaaaaaatgtgaaattattatttattttttttg--acttacttta 90
Query: 120 ttatctaaaatactttaagcataacttttcattttttatatttgc 164
|||| ||| ||||||||||| |||||||| ||||||||||||||
Sbjct: 89 ttattcaaagtactttaagcacaacttttcgttttttatatttgc 45
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 173 tttgaataagactagtggtcaaac 196
|||||||||||| |||||||||||
Sbjct: 130 tttgaataagacgagtggtcaaac 153
>49071_osa-miR818e:pmrd
Length = 225
Score = 87.7 bits (44), Expect = 4e-18
Identities = 114/140 (81%)
Strand = Plus / Plus
Query: 101 ttatttgtgacttactttattatctaaaatactttaagcataacttttcattttttatat 160
|||||| ||||||| ||||||||| ||| |||||||||||||||||||| ||||||||||
Sbjct: 86 ttatttttgacttattttattatccaaagtactttaagcataacttttcgttttttatat 145
Query: 161 ttgcnnnnnnnntttgaataagactagtggtcaaacgttacatgtaaaaaatcaaaatac 220
||| ||||||||| || ||||||||||| |||| ||||| | ||||| |
Sbjct: 146 ttgtacaaattttttgaataaaacgagtggtcaaacaatacaaacaaaaacttaaaatcc 205
Query: 221 cttatattgtgggacagagg 240
|||||||| |||||| ||||
Sbjct: 206 cttatattatgggacggagg 225
Score = 81.8 bits (41), Expect = 2e-16
Identities = 63/69 (91%), Gaps = 1/69 (1%)
Strand = Plus / Minus
Query: 9 cctccgtctcataatataagggattttaagtttttgcttgtaacgtttgacccactcgtc 68
|||||||| ||||||||||||||||||||||||||| ||||| |||||| ||||||||
Sbjct: 225 cctccgtcccataatataagggattttaagtttttgtttgtattgtttga-ccactcgtt 167
Query: 69 ttattcaaa 77
|||||||||
Sbjct: 166 ttattcaaa 158
Score = 40.1 bits (20), Expect = 8e-04
Identities = 44/52 (84%)
Strand = Plus / Minus
Query: 177 aataagactagtggtcaaacgttacatgtaaaaaatcaaaataccttatatt 228
|||||||| ||||||||||| | || | ||||| ||||||| |||||||||
Sbjct: 63 aataagacgagtggtcaaacagtgcaagcaaaaactcaaaatcccttatatt 12
>49070_osa-miR818d:pmrd
Length = 139
Score = 60.0 bits (30), Expect = 8e-10
Identities = 33/34 (97%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggatttta 36
|||||||||||||| |||||||||||||||||||
Sbjct: 128 gtactccctccgtcccataatataagggatttta 95
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggatttta 36
||||| |||| || |||||||||||||||||||
Sbjct: 15 tactctctccatcccataatataagggatttta 47
>51255_osa-miRf12040-akr:pmrd
Length = 102
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 3 gtactccctccgtctcataatataagggatttt 35
|||||||||||||| ||||||||||||||||||
Sbjct: 8 gtactccctccgtcccataatataagggatttt 40
Score = 40.1 bits (20), Expect = 8e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggatttt 35
||||||||| || ||||||||||||||||||
Sbjct: 94 tactccctctctcccataatataagggatttt 63
>51254_osa-miRf12039-akr:pmrd
Length = 102
Score = 58.0 bits (29), Expect = 3e-09
Identities = 32/33 (96%)
Strand = Plus / Plus
Query: 3 gtactccctccgtctcataatataagggatttt 35
|||||||||||||| ||||||||||||||||||
Sbjct: 8 gtactccctccgtcccataatataagggatttt 40
Score = 40.1 bits (20), Expect = 8e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggatttt 35
||||||||| || ||||||||||||||||||
Sbjct: 94 tactccctctctcccataatataagggatttt 63
>51250_osa-miRf12035-akr:pmrd
Length = 119
Score = 56.0 bits (28), Expect = 1e-08
Identities = 31/32 (96%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggatttt 35
||||||||||||| ||||||||||||||||||
Sbjct: 113 tactccctccgtcccataatataagggatttt 82
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataag 28
||||||||||||| |||||||||||
Sbjct: 10 tactccctccgtcccataatataag 34
>50738_osa-miRf11523-akr:pmrd
Length = 108
Score = 56.0 bits (28), Expect = 1e-08
Identities = 38/40 (95%), Gaps = 1/40 (2%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggattttaagttttt 43
||||||||||||| |||||||||| |||||||||||||||
Sbjct: 97 tactccctccgtcccataatataa-ggattttaagttttt 59
>54695_tae-miR1120:pmrd
Length = 119
Score = 50.1 bits (25), Expect = 8e-07
Identities = 25/25 (100%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataag 28
|||||||||||||||||||||||||
Sbjct: 99 tactccctccgtctcataatataag 75
Score = 44.1 bits (22), Expect = 5e-05
Identities = 25/26 (96%)
Strand = Plus / Plus
Query: 3 gtactccctccgtctcataatataag 28
|||||||||||||| |||||||||||
Sbjct: 17 gtactccctccgtcccataatataag 42
>50587_osa-miRf11372-akr:pmrd
Length = 126
Score = 50.1 bits (25), Expect = 8e-07
Identities = 28/29 (96%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggat 32
||||||||||||| |||||||||||||||
Sbjct: 7 tactccctccgtcccataatataagggat 35
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggatttt 35
||||||||||||| ||||||||||||| ||||
Sbjct: 121 tactccctccgtcccataatataagggttttt 90
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 220 ccttatattgtgggacagagggagtaga 247
||||||||| |||||| |||||||||||
Sbjct: 96 ccttatattatgggacggagggagtaga 123
>50305_osa-miRf11090-akr:pmrd
Length = 116
Score = 50.1 bits (25), Expect = 8e-07
Identities = 31/33 (93%)
Strand = Plus / Plus
Query: 213 caaaataccttatattgtgggacagagggagta 245
|||||| ||||||||| ||||||||||||||||
Sbjct: 76 caaaatcccttatattttgggacagagggagta 108
Score = 40.1 bits (20), Expect = 8e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggatttt 35
||||||||| ||| || |||||||||||||||
Sbjct: 108 tactccctctgtcccaaaatataagggatttt 77
>50274_osa-miRf11059-akr:pmrd
Length = 172
Score = 50.1 bits (25), Expect = 8e-07
Identities = 31/33 (93%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggatttt 35
|||||||||||||| ||| ||||||||||||||
Sbjct: 35 gtactccctccgtcccatgatataagggatttt 3
>50275_osa-miRf11060-akr:pmrd
Length = 166
Score = 48.1 bits (24), Expect = 3e-06
Identities = 30/32 (93%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggattt 34
|||||||||||||| ||| |||||||||||||
Sbjct: 32 gtactccctccgtcccatgatataagggattt 1
>49068_osa-miR818b:pmrd
Length = 113
Score = 46.1 bits (23), Expect = 1e-05
Identities = 26/27 (96%)
Strand = Plus / Minus
Query: 9 cctccgtctcataatataagggatttt 35
|||||||| ||||||||||||||||||
Sbjct: 113 cctccgtcccataatataagggatttt 87
Score = 40.1 bits (20), Expect = 8e-04
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 9 cctccgtctcataatataagggatttta 36
|||||||| ||||||||||| |||||||
Sbjct: 1 cctccgtcccataatataagagatttta 28
>51023_osa-miRf11808-akr:pmrd
Length = 117
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggatttta 36
||||||||||||| | ||||||||||||||||
Sbjct: 113 tactccctccgtccctaaatataagggatttta 81
>49537_osa-miRf10322-akr:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggatttt 35
|||||||||||||| | |||||||||||||||
Sbjct: 97 gtactccctccgtcccgaaatataagggatttt 65
>49536_osa-miRf10321-akr:pmrd
Length = 105
Score = 42.1 bits (21), Expect = 2e-04
Identities = 30/33 (90%)
Strand = Plus / Minus
Query: 3 gtactccctccgtctcataatataagggatttt 35
|||||||||||||| | |||||||||||||||
Sbjct: 97 gtactccctccgtcccgaaatataagggatttt 65
>49427_osa-miRf10212-akr:pmrd
Length = 97
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Plus
Query: 11 tccgtctcataatataagggatttt 35
|||||| ||||||||||||||||||
Sbjct: 71 tccgtcccataatataagggatttt 95
Score = 40.1 bits (20), Expect = 8e-04
Identities = 29/32 (90%)
Strand = Plus / Minus
Query: 4 tactccctccgtctcataatataagggatttt 35
||||||||||||| | ||||| ||||||||||
Sbjct: 34 tactccctccgtcccctaatacaagggatttt 3
>49126_osa-miR1442:pmrd
Length = 185
Score = 42.1 bits (21), Expect = 2e-04
Identities = 27/29 (93%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggat 32
|||||| |||||| |||||||||||||||
Sbjct: 117 tactccatccgtcccataatataagggat 145
>49069_osa-miR818c:pmrd
Length = 176
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 11 tccgtctcataatataagggatttt 35
|||||| ||||||||||||||||||
Sbjct: 164 tccgtcccataatataagggatttt 140
>49067_osa-miR818a:pmrd
Length = 144
Score = 42.1 bits (21), Expect = 2e-04
Identities = 24/25 (96%)
Strand = Plus / Minus
Query: 11 tccgtctcataatataagggatttt 35
|||||| ||||||||||||||||||
Sbjct: 139 tccgtcccataatataagggatttt 115
>49712_osa-miRf10497-akr:pmrd
Length = 172
Score = 40.1 bits (20), Expect = 8e-04
Identities = 29/32 (90%)
Strand = Plus / Plus
Query: 4 tactccctccgtctcataatataagggatttt 35
||||||||||||| | |||||||||||||||
Sbjct: 2 tactccctccgtccctaaatataagggatttt 33
>48325_bdi-miR2502:pmrd
Length = 94
Score = 40.1 bits (20), Expect = 8e-04
Identities = 23/24 (95%)
Strand = Plus / Plus
Query: 1 atgtactccctccgtctcataata 24
||||||||||||||||||| ||||
Sbjct: 2 atgtactccctccgtctcaaaata 25
